Michel Noirot

Summary

Country: France

Publications

  1. ncbi request reprint Consequences of stoichiometric error on nuclear DNA content evaluation in Coffea liberica var. dewevrei using DAPI and propidium iodide
    Michel Noirot
    Laboratoire GeneTrop, Centre IRD de Montpellier, France
    Ann Bot 89:385-9. 2002
  2. ncbi request reprint Investigation on the causes of stoichiometric error in genome size estimation using heat experiments: consequences on data interpretation
    Michel Noirot
    UMR DGPC, Centre IRD de Montpellier, BP 64501, 34394 Montpellier Cedex 5, France
    Ann Bot 95:111-8. 2005
  3. ncbi request reprint Genome size variations in diploid African Coffea species
    M Noirot
    IRD, BP 64501, 34394 Montpellier Cedex 5, France
    Ann Bot 92:709-14. 2003
  4. ncbi request reprint Effects of caffeine and chlorogenic acid on propidium iodide accessibility to DNA: consequences on genome size evaluation in coffee tree
    M Noirot
    IRD BP5045, 34032 Montpellier Cedex, France
    Ann Bot 92:259-64. 2003
  5. ncbi request reprint SSR cross-amplification and variation within coffee trees (Coffea spp.)
    V Poncet
    UMR 1097, IRD, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France
    Genome 47:1071-81. 2004
  6. ncbi request reprint Functional characterization of two p-coumaroyl ester 3'-hydroxylase genes from coffee tree: evidence of a candidate for chlorogenic acid biosynthesis
    Venkataramaiah Mahesh
    Laboratoire de Génomique et Qualité du café, IRD, UMR 1097 DGPC, 911 Avenue Agropolis, BP 64501, 34394, Montpellier Cedex 5, France
    Plant Mol Biol 64:145-59. 2007
  7. ncbi request reprint Isolation and genetic mapping of a Coffea canephora phenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acids
    Venkataramaiah Mahesh
    IRD, Génomique et qualité du Café, UMR DGPC, BP 64501, 34304, Montpellier Cedex 5, France
    Plant Cell Rep 25:986-92. 2006
  8. ncbi request reprint Development of probabilistic tools to assist in the establishment and management of cryopreserved plant germplasm collections
    Stephane Dussert
    UMR DGPC, Institut de recherche pour le developpement IRD, 911 Av dAgropolis, BP 64501, F34394 Montpellier 5, France
    Cryo Letters 24:149-60. 2003
  9. ncbi request reprint Base composition of Coffea AFLP sequences and their conservation within the genus
    V Poncet
    UMR 1097 Diversité et Génome des Plantes Cultivées, Centre IRD, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France
    J Hered 96:59-65. 2005
  10. ncbi request reprint Genetic mapping of a caffeoyl-coenzyme A 3-O-methyltransferase gene in coffee trees. Impact on chlorogenic acid content
    C Campa
    IRD, BP 64501, 34394 Montpellier Cedex 5, France
    Theor Appl Genet 107:751-6. 2003

Collaborators

  • Valérie Poncet
  • Claudine Campa
  • P Barre
  • Stephane Dussert
  • Marc Morant
  • Pascale Talamond
  • Venkataramaiah Mahesh
  • Serge Hamon
  • Alexandre DE Kochko
  • José Bustamante-Porras
  • I Coulibaly
  • Thierry Leroy
  • Rachel Million-Rousseau
  • Daniele Werck-Reichhart
  • José Bustamante
  • Nathalie Chabrillange
  • Laurence Mondolot
  • Pascaline Ullmann
  • Jean Jacques Rakotomalala
  • Lénaïg Le Gal
  • Hélène Vigne
  • C Carasco-Lacombe
  • B Revol
  • M Lorieux
  • J Minier
  • P Hamon
  • M Dufour

Detail Information

Publications14

  1. ncbi request reprint Consequences of stoichiometric error on nuclear DNA content evaluation in Coffea liberica var. dewevrei using DAPI and propidium iodide
    Michel Noirot
    Laboratoire GeneTrop, Centre IRD de Montpellier, France
    Ann Bot 89:385-9. 2002
    ..An accurate estimate of genome size can thus be obtained with PI. Implications with respect to accessibility and binding mode are discussed...
  2. ncbi request reprint Investigation on the causes of stoichiometric error in genome size estimation using heat experiments: consequences on data interpretation
    Michel Noirot
    UMR DGPC, Centre IRD de Montpellier, BP 64501, 34394 Montpellier Cedex 5, France
    Ann Bot 95:111-8. 2005
    ..The aim of the present study was to compare the effects of standardization (external-internal) on nuclear fluorescence of two Coffea species and petunia when temperature increases, and the consequences on genome size estimation...
  3. ncbi request reprint Genome size variations in diploid African Coffea species
    M Noirot
    IRD, BP 64501, 34394 Montpellier Cedex 5, France
    Ann Bot 92:709-14. 2003
    ..Consequently, genome size variation between species and within species are discussed as true genome size differences or stoichiometric errors. Environmental and phenotypic correlations with genome size are also discussed...
  4. ncbi request reprint Effects of caffeine and chlorogenic acid on propidium iodide accessibility to DNA: consequences on genome size evaluation in coffee tree
    M Noirot
    IRD BP5045, 34032 Montpellier Cedex, France
    Ann Bot 92:259-64. 2003
    ..They could also be implicated in environmental variations in genome size, such as those revealed when comparing the results of evaluations carried out on different dates on several genotypes...
  5. ncbi request reprint SSR cross-amplification and variation within coffee trees (Coffea spp.)
    V Poncet
    UMR 1097, IRD, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France
    Genome 47:1071-81. 2004
    ..All of these data are discussed in relation to the polymorphism level and the potential use of these SSRs for subsequent analysis of genetic diversity or genetic mapping...
  6. ncbi request reprint Functional characterization of two p-coumaroyl ester 3'-hydroxylase genes from coffee tree: evidence of a candidate for chlorogenic acid biosynthesis
    Venkataramaiah Mahesh
    Laboratoire de Génomique et Qualité du café, IRD, UMR 1097 DGPC, 911 Avenue Agropolis, BP 64501, 34394, Montpellier Cedex 5, France
    Plant Mol Biol 64:145-59. 2007
    ..The lack of correlation between gene expression and HQA content observed in some organs is discussed in terms of transport and accumulation mechanisms...
  7. ncbi request reprint Isolation and genetic mapping of a Coffea canephora phenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acids
    Venkataramaiah Mahesh
    IRD, Génomique et qualité du Café, UMR DGPC, BP 64501, 34304, Montpellier Cedex 5, France
    Plant Cell Rep 25:986-92. 2006
    ..pseudozanguebariae CcPAL1 allele. Involvement of the CcPAL1 allelic form in the differential accumulation of caffeoylquinic acids in coffee green beans is then discussed...
  8. ncbi request reprint Development of probabilistic tools to assist in the establishment and management of cryopreserved plant germplasm collections
    Stephane Dussert
    UMR DGPC, Institut de recherche pour le developpement IRD, 911 Av dAgropolis, BP 64501, F34394 Montpellier 5, France
    Cryo Letters 24:149-60. 2003
    ..Reciprocally, once the plant recovery percentage has been estimated, it is possible to assess the minimum size of the cryobank sample to obtain a probability to recover at least one (or A, with A>1) plant(s) higher than some fixed level...
  9. ncbi request reprint Base composition of Coffea AFLP sequences and their conservation within the genus
    V Poncet
    UMR 1097 Diversité et Génome des Plantes Cultivées, Centre IRD, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France
    J Hered 96:59-65. 2005
    ..Conversion of these AFLP markers into sequence-characterized amplified region (SCAR) anchor markers allowed us to assess sequence conservation within Coffea species with respect to species relatedness...
  10. ncbi request reprint Genetic mapping of a caffeoyl-coenzyme A 3-O-methyltransferase gene in coffee trees. Impact on chlorogenic acid content
    C Campa
    IRD, BP 64501, 34394 Montpellier Cedex 5, France
    Theor Appl Genet 107:751-6. 2003
    ..accumulation is dependent on the CCoAMT allele present and consequently on the activity of the encoded isoform, whereby CGA accumulation increases as the isoform activity decreases. Possible implications in coffee breeding are discussed...
  11. ncbi request reprint Inheritance of seed desiccation sensitivity in a coffee interspecific cross: evidence for polygenic determinism
    Stephane Dussert
    IRD, UR 141, 911 Av Agropolis, BP 64501, F 34394 Montpellier Cedex 5, France
    J Exp Bot 55:1541-7. 2004
    ..Moreover, there was no significant correlation within BCs between seed size, seed viability, and water content before desiccation and desiccation tolerance...
  12. ncbi request reprint AFLP and SSR polymorphism in a Coffea interspecific backcross progeny [( C. heterocalyx x C. canephora) x C. canephora]
    I Coulibaly
    IRD, UMR 1097, 911 Av Agropolis, BP 64501, 34394 Montpellier Cedex 5, France
    Theor Appl Genet 107:1148-55. 2003
    ..They are discussed relative to three main points: (1) the relevance of the different marker types, (2) the genomic distribution of AFLP and SSR markers, and (3) the relation between AFLP polymorphism and genome size...
  13. ncbi request reprint The mechanism of action of alpha-amylase from Lactobacillus fermentum on maltooligosaccharides
    Pascale Talamond
    Institut de Recherche pour le Developpement, UMR 141, 911 av d Agropolis, BP 64501, 34394 Montpellier, Cedex 5, France
    J Chromatogr B Analyt Technol Biomed Life Sci 834:42-7. 2006
    ..7 x 10(4) M(-1) s(-1)) up to amylose (1 x10(9) M(-1) s(-1)). These action pattern results revealed that FERMENTA can readily cleave the third linkage from the reducing end of the maltooligosaccharides (G5-G7)...
  14. ncbi request reprint Molecular characterization of an ethylene receptor gene (CcETR1) in coffee trees, its relationship with fruit development and caffeine content
    José Bustamante-Porras
    Instituto Nacional de Investigaciones Agricolas, Bramón, Rubio, Táchira, Venezuela
    Mol Genet Genomics 277:701-12. 2007
    ..This gene showed no induction during the climacteric crisis but some linkage with traits related to quality...