Gaelle Lelandais

Summary

Country: France

Publications

  1. ncbi Statistical inference of the time-varying structure of gene-regulation networks
    Sophie Lebre
    Center for Bioinformatics, Imperial College London, London, UK
    BMC Syst Biol 4:130. 2010
  2. ncbi Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes
    David Cohen
    INRA, Nancy Universite, UMR1137 Ecologie et Ecophysiologie Forestières, IFR 110 EFABA, F 54280 Champenoux, France
    BMC Genomics 11:630. 2010
  3. ncbi The evolution of gene expression regulatory networks in yeasts
    Gaelle Lelandais
    INSERM UMR S 665, Dynamique des Structures et Interactions des Macromolécules Biologiques, Universite Paris Diderot, Sorbonne Paris Cité, INTS, 6 rue Alexandre Cabanel, 75015 Paris, France
    C R Biol 334:655-61. 2011
  4. ncbi Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata
    Gaelle Lelandais
    Equipe de Bioinformatique Genomique et Moleculaire, INSERM UMR S726, Universite Paris 7, INTS, 6 rue Alexandre Cabanel, 75015 Paris, France
    Genome Biol 9:R164. 2008
  5. ncbi Spatio-temporal dynamics of yeast mitochondrial biogenesis: transcriptional and post-transcriptional mRNA oscillatory modules
    Gaelle Lelandais
    Dynamique des Structures et Interactions des Macromolecules Biologiques DSIMB, INSERM UMR S 665, Universite Paris Diderot, Paris, France
    PLoS Comput Biol 5:e1000409. 2009
  6. ncbi yMGV: a cross-species expression data mining tool
    Gaelle Lelandais
    Laboratoire de Genetique Moleculaire, CNRS UMR8541, Ecole Normale Superieure, Paris, France
    Nucleic Acids Res 32:D323-5. 2004
  7. ncbi The central role of PDR1 in the foundation of yeast drug resistance
    Vivienne Fardeau
    Laboratoire de Genetique Moleculaire, CNRS UMR8541, Paris, France
    J Biol Chem 282:5063-74. 2007
  8. ncbi The reconstruction of condition-specific transcriptional modules provides new insights in the evolution of yeast AP-1 proteins
    Christel Goudot
    Dynamique des Structures et Interactions des Macromolécules Biologiques, INSERM, U665 Paris, France
    PLoS ONE 6:e20924. 2011
  9. ncbi Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments
    Magalie Celton
    INSERM UMR S 726, Equipe de Bioinformatique Genomique et Moleculaire, DSIMB, Universite Paris Diderot Paris 7, 2 place Jussieu, Paris, France
    BMC Genomics 11:15. 2010
  10. ncbi MitoGenesisDB: an expression data mining tool to explore spatio-temporal dynamics of mitochondrial biogenesis
    Jean Christophe Gelly
    Dynamique des Structures et Interactions des Macromolécules Biologiques, INSERM, U665, Paris F 75015, France
    Nucleic Acids Res 39:D1079-84. 2011

Collaborators

Detail Information

Publications13

  1. ncbi Statistical inference of the time-varying structure of gene-regulation networks
    Sophie Lebre
    Center for Bioinformatics, Imperial College London, London, UK
    BMC Syst Biol 4:130. 2010
    ....
  2. ncbi Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes
    David Cohen
    INRA, Nancy Universite, UMR1137 Ecologie et Ecophysiologie Forestières, IFR 110 EFABA, F 54280 Champenoux, France
    BMC Genomics 11:630. 2010
    ..Drought-induced responses were analysed in leaves and root apices and were compared with available transcriptome data from other Populus species...
  3. ncbi The evolution of gene expression regulatory networks in yeasts
    Gaelle Lelandais
    INSERM UMR S 665, Dynamique des Structures et Interactions des Macromolécules Biologiques, Universite Paris Diderot, Sorbonne Paris Cité, INTS, 6 rue Alexandre Cabanel, 75015 Paris, France
    C R Biol 334:655-61. 2011
    ..This article reviews some of the main advances made in this field, using yeast species, and especially the species sequenced in the frame of the Genolevures program, as a model...
  4. ncbi Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata
    Gaelle Lelandais
    Equipe de Bioinformatique Genomique et Moleculaire, INSERM UMR S726, Universite Paris 7, INTS, 6 rue Alexandre Cabanel, 75015 Paris, France
    Genome Biol 9:R164. 2008
    ....
  5. ncbi Spatio-temporal dynamics of yeast mitochondrial biogenesis: transcriptional and post-transcriptional mRNA oscillatory modules
    Gaelle Lelandais
    Dynamique des Structures et Interactions des Macromolecules Biologiques DSIMB, INSERM UMR S 665, Universite Paris Diderot, Paris, France
    PLoS Comput Biol 5:e1000409. 2009
    ..More generally, these observations underscore the importance of post-transcriptional processes in mitochondrial biogenesis, highlighting close connections between nuclear transcription and cytoplasmic site-specific translation...
  6. ncbi yMGV: a cross-species expression data mining tool
    Gaelle Lelandais
    Laboratoire de Genetique Moleculaire, CNRS UMR8541, Ecole Normale Superieure, Paris, France
    Nucleic Acids Res 32:D323-5. 2004
    ..This should enable the fission yeast community to take advantage of the large amount of available information on budding yeast transcriptome. New tools and ongoing developments are also presented here...
  7. ncbi The central role of PDR1 in the foundation of yeast drug resistance
    Vivienne Fardeau
    Laboratoire de Genetique Moleculaire, CNRS UMR8541, Paris, France
    J Biol Chem 282:5063-74. 2007
    ..Thus, Pdr1p is a promoter-resident regulator involved in both basal expression and rapid drug-dependent induction of PDR genes...
  8. ncbi The reconstruction of condition-specific transcriptional modules provides new insights in the evolution of yeast AP-1 proteins
    Christel Goudot
    Dynamique des Structures et Interactions des Macromolécules Biologiques, INSERM, U665 Paris, France
    PLoS ONE 6:e20924. 2011
    ....
  9. ncbi Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments
    Magalie Celton
    INSERM UMR S 726, Equipe de Bioinformatique Genomique et Moleculaire, DSIMB, Universite Paris Diderot Paris 7, 2 place Jussieu, Paris, France
    BMC Genomics 11:15. 2010
    ..In this study, we have evaluated twelve different usable methods, and their influence on the quality of gene clustering. Interestingly we have used several datasets, both kinetic and non kinetic experiments from yeast and human...
  10. ncbi MitoGenesisDB: an expression data mining tool to explore spatio-temporal dynamics of mitochondrial biogenesis
    Jean Christophe Gelly
    Dynamique des Structures et Interactions des Macromolécules Biologiques, INSERM, U665, Paris F 75015, France
    Nucleic Acids Res 39:D1079-84. 2011
    ..The case of respiratory chain assembly factors illustrates this point. The MitoGenesisDB interface is available at http://www.dsimb.inserm.fr/dsimb_tools/mitgene/...
  11. ncbi Posttranscriptional control of mitochondrial biogenesis: spatio-temporal regulation of the protein import process
    Frederic Devaux
    Laboratoire de Génomique des Microorganismes, FRE3214 CNRS, Universite Pierre et Marie Curie, Paris, France
    FEBS Lett 584:4273-9. 2010
    ..A connection with the target of rapamycine signalling pathway may explain how respiratory chain assembly senses environmental conditions via the protein import machinery...
  12. ncbi MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
    Gaelle Lelandais
    Laboratoire de Génétique Moléculaire CNRS UMR8541, Ecole Normale Superieure, Paris, 75230 Cedex 05, France
    BMC Bioinformatics 5:20. 2004
    ..One of the challenging questions raised by the tremendous amount of microarray data is to identify groups of co-regulated genes and to understand their role in cell functions...
  13. ncbi Comparative functional genomics of stress responses in yeasts
    Gaelle Lelandais
    Dynamique des Structures et Interactions des Macromolécules Biologiques, INSERM UMR S 665, Universite Paris Diderot, Paris, France
    OMICS 14:501-15. 2010
    ....