Claude Rispe

Summary

Affiliation: Institut National de la Recherche Agronomique
Country: France

Publications

  1. pmc Comparison of gene repertoires and patterns of evolutionary rates in eight aphid species that differ by reproductive mode
    M Ollivier
    INRA Rennes UMR BIO3P, Domaine de la Motte, Le Rheu, France
    Genome Biol Evol 4:155-67. 2012
  2. pmc Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
    Beatriz Sabater-Muñoz
    INRA Rennes, UMR INRA Agrocampus BiO3P, BP 35327, F 35653 Le Rheu cedex, France
    Genome Biol 7:R21. 2006
  3. pmc Evolutionary study of duplications of the miRNA machinery in aphids associated with striking rate acceleration and changes in expression profiles
    Benjamín Ortiz-Rivas
    INRA, UMR 1349 IGEPP, Le Rheu, 35653, France
    BMC Evol Biol 12:216. 2012
  4. pmc Tempo and mode of early gene loss in endosymbiotic bacteria from insects
    F Delmotte
    UMR Santé Végétale INRA ENITAB, INRA BP81, 33883 Villenave d Ornon Cedex, France
    BMC Evol Biol 6:56. 2006
  5. ncbi request reprint Large gene family expansion and variable selective pressures for cathepsin B in aphids
    Claude Rispe
    Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1099 BiO3P, Le Rheu, France
    Mol Biol Evol 25:5-17. 2008
  6. ncbi request reprint Strong heterogeneity in nucleotidic composition and codon bias in the pea aphid (Acyrthosiphon pisum) shown by EST-based coding genome reconstruction
    Claude Rispe
    Institut National de la Recherche Agronomique, Domaine de la Motte, Unité Mixte de Recherche 1099 BiO3P, Le Rheu, France
    J Mol Evol 65:413-24. 2007
  7. pmc Masculinization of the x chromosome in the pea aphid
    Julie Jaquiery
    INRA, UMR 1349, Institute of Genetics, Environment and Plant Protection, Domaine de la Motte, Le Rheu, France
    PLoS Genet 9:e1003690. 2013
  8. pmc Mutational and selective pressures on codon and amino acid usage in Buchnera, endosymbiotic bacteria of aphids
    Claude Rispe
    UMR BiO3P, Institut National de la Recherche Agronomique, BP35327, 35653 Le Rheu Cedex, France
    Genome Res 14:44-53. 2004
  9. pmc Expansion of the miRNA pathway in the hemipteran insect Acyrthosiphon pisum
    Stéphanie Jaubert-Possamai
    Institut de la Recherche Agronomique INRA, UMR1099 BiO3P, Domaine de la Motte, F 35653 Le Rheu, France
    Mol Biol Evol 27:979-87. 2010
  10. pmc Gene knockdown by RNAi in the pea aphid Acyrthosiphon pisum
    Stéphanie Jaubert-Possamai
    INRA, Agrocampus Rennes, UMR 1099 BiO3P Biology of Organisms and Populations Applied to Plant Protection, F 35653 Le Rheu, France
    BMC Biotechnol 7:63. 2007

Collaborators

Detail Information

Publications18

  1. pmc Comparison of gene repertoires and patterns of evolutionary rates in eight aphid species that differ by reproductive mode
    M Ollivier
    INRA Rennes UMR BIO3P, Domaine de la Motte, Le Rheu, France
    Genome Biol Evol 4:155-67. 2012
    ....
  2. pmc Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
    Beatriz Sabater-Muñoz
    INRA Rennes, UMR INRA Agrocampus BiO3P, BP 35327, F 35653 Le Rheu cedex, France
    Genome Biol 7:R21. 2006
    ..This project is the first to address the genetics of the Hemiptera and of a hemimetabolous insect...
  3. pmc Evolutionary study of duplications of the miRNA machinery in aphids associated with striking rate acceleration and changes in expression profiles
    Benjamín Ortiz-Rivas
    INRA, UMR 1349 IGEPP, Le Rheu, 35653, France
    BMC Evol Biol 12:216. 2012
    ..We have also carried out an analysis of the expression of both copies of ago-1 and dcr-1 by semi-quantitative PCR in different morphs of the pea aphid life cycle...
  4. pmc Tempo and mode of early gene loss in endosymbiotic bacteria from insects
    F Delmotte
    UMR Santé Végétale INRA ENITAB, INRA BP81, 33883 Villenave d Ornon Cedex, France
    BMC Evol Biol 6:56. 2006
    ..coli (i.e. codon adaptive index, or CAI), and also estimates of evolutionary rates (Ka) between pairs of orthologs either in free-living bacteria or in pairs of symbionts...
  5. ncbi request reprint Large gene family expansion and variable selective pressures for cathepsin B in aphids
    Claude Rispe
    Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1099 BiO3P, Le Rheu, France
    Mol Biol Evol 25:5-17. 2008
    ..pisum. Putative biological roles of the diversified cathepsin B-like gene copies in aphids are discussed in relation to their nutritional physiology specialized for plant sap feeding lifestyle...
  6. ncbi request reprint Strong heterogeneity in nucleotidic composition and codon bias in the pea aphid (Acyrthosiphon pisum) shown by EST-based coding genome reconstruction
    Claude Rispe
    Institut National de la Recherche Agronomique, Domaine de la Motte, Unité Mixte de Recherche 1099 BiO3P, Le Rheu, France
    J Mol Evol 65:413-24. 2007
    ..Finally, genomic traces were analyzed to build 206 fragments containing a full CDS, which allowed studying the correlations between GC contents of coding and those of noncoding (flanking and introns) sequences...
  7. pmc Masculinization of the x chromosome in the pea aphid
    Julie Jaquiery
    INRA, UMR 1349, Institute of Genetics, Environment and Plant Protection, Domaine de la Motte, Le Rheu, France
    PLoS Genet 9:e1003690. 2013
    ....
  8. pmc Mutational and selective pressures on codon and amino acid usage in Buchnera, endosymbiotic bacteria of aphids
    Claude Rispe
    UMR BiO3P, Institut National de la Recherche Agronomique, BP35327, 35653 Le Rheu Cedex, France
    Genome Res 14:44-53. 2004
    ..However, Buchnera from Baizongia pistaciae appears to have suffered a stronger symbiotic syndrome than the two other species...
  9. pmc Expansion of the miRNA pathway in the hemipteran insect Acyrthosiphon pisum
    Stéphanie Jaubert-Possamai
    Institut de la Recherche Agronomique INRA, UMR1099 BiO3P, Domaine de la Motte, F 35653 Le Rheu, France
    Mol Biol Evol 27:979-87. 2010
    ..Investigating the function of these novel genes offers an exciting new challenge in aphid biology...
  10. pmc Gene knockdown by RNAi in the pea aphid Acyrthosiphon pisum
    Stéphanie Jaubert-Possamai
    INRA, Agrocampus Rennes, UMR 1099 BiO3P Biology of Organisms and Populations Applied to Plant Protection, F 35653 Le Rheu, France
    BMC Biotechnol 7:63. 2007
    ..RNA interference (RNAi) is a powerful method to inhibit gene expression in a sequence specific manner...
  11. doi request reprint Cuticular proteins and seasonal photoperiodism in aphids
    Aurore Gallot
    INRA, UMR BiO3P, BP 35327, 35653 Le Rheu Cedex, France
    Insect Biochem Mol Biol 40:235-40. 2010
    ..This review focuses on the description of cuticular protein genes in the pea aphid and their regulation during the change of reproductive mode...
  12. ncbi request reprint AphidBase: a database for aphid genomic resources
    Jean Pierre Gauthier
    INRA, Agrocampus Rennes, UMR 1099 BiO3P Biology of Organisms and Populations Applied to Plant Protection, F 35653 Le Rheu, France
    Bioinformatics 23:783-4. 2007
    ..AphidBase represents one of the first genomic databases for a hemipteran insect...
  13. doi request reprint Genomic analysis of the biocontrol strain Pseudomonas fluorescens Pf29Arp with evidence of T3SS and T6SS gene expression on plant roots
    Muriel Marchi
    INRA, UMR1349 IGEPP, F 35653, Le Rheu, France
    Environ Microbiol Rep 5:393-403. 2013
    ..These data suggest a role of T3SS and T6SS in the Pf29Arp adaptation to different root environments...
  14. doi request reprint Accelerated evolution of sex chromosomes in aphids, an x0 system
    Julie Jaquiery
    Institut National de Recherche Agronomique INRA, Unité Mixte de Recherche 1099, Biology of Organisms and Populations Applied to Plant Protection, Le Rheu, France
    Mol Biol Evol 29:837-47. 2012
    ..Overall, this study highlights the particular relevance of aphids to study the evolutionary factors driving sex chromosomes and genome evolution...
  15. ncbi request reprint Dynamics of production of sexual forms in aphids: theoretical and experimental evidence for adaptive "coin-flipping" plasticity
    Fabien Halkett
    Unité Mixte de Recherche Institut National de la Recherche Agronomique Agrocampus de Rennes, Biologie des Organismes et des Populations, appliquée à la Protection des Plantes, 35042 Rennes Cedex, France
    Am Nat 163:E112-25. 2004
    ..Both predictions are validated against standardized trap data on aphid flight accompanied by meteorological data, and the predictions support adaptive phenotypic plasticity...
  16. ncbi request reprint The anatomy of an aphid genome: from sequence to biology
    Denis Tagu
    INRA, UMR BiO3P, BP, Le Rheu Cedex, France
    C R Biol 333:464-73. 2010
    ..Thus, in the second part of the review, we envisage how this genomic resource will fuel many other disciplines such as ecology, evolutionary biology, population genetics and symbiosis...
  17. ncbi request reprint Phylogenetic evidence for hybrid origins of asexual lineages in an aphid species
    Francois Delmotte
    Institut National de la Recherche Agronomique, Unité Mixte de Recherche Biologie des Organismes et des Populations appliquée à la Protection des Plantes, BP 35327, 35653 Le Rheu Cedex, France
    Evolution 57:1291-303. 2003
    ..It also presents a robust approach for testing whether hybrid origin of asexuality is also a common phenomenon in aphids...
  18. ncbi request reprint Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria
    Jörg Schaber
    Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de Valencia, A C 22085, 46071 Valencia, Spain
    Gene 352:109-17. 2005
    ....