Etienne Paux

Summary

Affiliation: Institut National de la Recherche Agronomique
Country: France

Publications

  1. pmc Transcriptional profile analysis of E3 ligase and hormone-related genes expressed during wheat grain development
    Delphine Capron
    Universite Blaise Pascal, UMR 1095 GDEC, 24 avenue des Landais, F 63177 Aubiere, France
    BMC Plant Biol 12:35. 2012
  2. pmc DNA repair and crossing over favor similar chromosome regions as discovered in radiation hybrid of Triticum
    Ajay Kumar
    Department of Plant Sciences, North Dakota State University, Fargo, ND 58102, USA
    BMC Genomics 13:339. 2012
  3. pmc Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome
    Romain Philippe
    INRA UBP, UMR1095, Genetics Diversity and Ecophysiology of Cereals, 234 avenue du Brezet, 63100 Clermont Ferrand, France
    BMC Genomics 13:47. 2012
  4. pmc A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block
    James Breen
    Centre for Comparative Genomics, Murdoch University, Perth, Australia
    BMC Plant Biol 10:98. 2010
  5. pmc A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
    Jan Bartos
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    BMC Plant Biol 8:95. 2008
  6. pmc A new genomic resource dedicated to wood formation in Eucalyptus
    David Rengel
    UMR CNRS Université Toulouse III 5546, Pôle de Biotechnologies Végétales, 24 Chemin de Borde Rouge, BP42617 Auzeville, 31326 Castanet Tolosan, France
    BMC Plant Biol 9:36. 2009
  7. pmc Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources
    Camille Rustenholz
    INRA UMR 1095, Génétique Diversité et Ecophysiologie des Céréales, 63100 Clermont Ferrand, France
    BMC Genomics 11:714. 2010
  8. doi Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat
    Etienne Paux
    INRA UBP UMR 1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont Ferrand, France
    Plant Biotechnol J 8:196-210. 2010
  9. doi Variation in crossover rates across a 3-Mb contig of bread wheat (Triticum aestivum) reveals the presence of a meiotic recombination hotspot
    Cyrille Saintenac
    UMR 1095, Genetics, Diversity and Ecophysiology of Cereals, INRA UBP, Domaine de Crouël, 234 avenue du Brezet, Clermont Ferrand, 63100, France
    Chromosoma 120:185-98. 2011
  10. pmc Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces
    Frédéric Choulet
    Institut National de la Recherche Agronomique, Universite Blaise Pascal, Unité Mixte de Recherche 1095 Genetics Diversity and Ecophysiology of Cereals, F 63100 Clermont Ferrand, France
    Plant Cell 22:1686-701. 2010

Collaborators

  • Catherine Feuillet
  • Andrzej Kilian
  • Abraham Korol
  • Rudi Appels
  • Catherine Ravel
  • Jerome Salse
  • Hana Simkova
  • Jaroslav Dolezel
  • Wolfgang Spielmeyer
  • Francois Balfourier
  • Michel Bernard
  • Bikram S Gill
  • Beat Keller
  • Thomas Wicker
  • Hikmet Budak
  • James A Anderson
  • Frédéric Choulet
  • Camille Rustenholz
  • James Breen
  • Delphine Capron
  • Romain Philippe
  • Ajay Kumar
  • Cyrille Saintenac
  • Patrick Wincker
  • Xiuying Kong
  • Arnaud Couloux
  • David Rengel
  • Jan Bartos
  • Michiel J T van Eijk
  • Mohamed Fouad Bouzidi
  • Jan van Oeveren
  • Adriana Alberti
  • Anne M Denton
  • Antoine Janssen
  • Jifeng Tang
  • Eric Huttner
  • Eduard Akhunov
  • Monika Michalak de Jimenez
  • Muhammad J Iqbal
  • Vijay K Tiwari
  • Sachin Kumar
  • Omar Al-Azzam
  • Aurelia Boulaflous
  • Pushpendra K Gupta
  • Keith Stormo
  • Harcharan S Dhaliwal
  • Harindra S Balyan
  • Münevver Doğramaci
  • Christel Laugier
  • Alexander H J Wittenberg
  • Said Mouzeyar
  • Yong Q Gu
  • Wojciech P Pawlowski
  • Aakash Goyal
  • Christine Girousse
  • Gursharn S Randhawa
  • Edwin van der Vossen
  • Filippo M Bassi
  • Shahryar F Kianian
  • Arnaud Remay
  • Sebastien Faure
  • Pierre Sourdille
  • Sixin Liu
  • Wujun Ma
  • Dominique Brunel
  • Robbie Waugh
  • Ghislaine Magdelenat
  • Philippe Leroy
  • Catherine Gonthier
  • Pete E Hedley
  • Juncheng Zhang
  • Jenny Morris
  • Stéphane Schlub
  • Marta Gut
  • Jizeng Jia
  • Matthew Bellgard
  • Marie Christine Le Paslier
  • Michael Pumphrey
  • Pierre Sivadon
  • Jacqueline Grima-Pettenati
  • Hélène San Clemente
  • Nathalie Ladouce
  • Florence Servant
  • Tamas Lelley
  • David Kopecky
  • Jan Safar
  • Christopher D Town
  • Robert Kofler
  • Miroslava Havránková
  • Pavla Suchánková

Detail Information

Publications13

  1. pmc Transcriptional profile analysis of E3 ligase and hormone-related genes expressed during wheat grain development
    Delphine Capron
    Universite Blaise Pascal, UMR 1095 GDEC, 24 avenue des Landais, F 63177 Aubiere, France
    BMC Plant Biol 12:35. 2012
    ..Among the different roles of the UPS, it is clear that it is essential to hormone signaling. In particular, E3 ubiquitin ligases of the UPS have been shown to play critical roles in hormone perception and signal transduction...
  2. pmc DNA repair and crossing over favor similar chromosome regions as discovered in radiation hybrid of Triticum
    Ajay Kumar
    Department of Plant Sciences, North Dakota State University, Fargo, ND 58102, USA
    BMC Genomics 13:339. 2012
    ..An in vivo RH panel was generated for mapping chromosome 3B of wheat in an attempt to provide a complete scaffold for this ~1 Gb segment of the genome and compare the resolution to previous genetic maps...
  3. pmc Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome
    Romain Philippe
    INRA UBP, UMR1095, Genetics Diversity and Ecophysiology of Cereals, 234 avenue du Brezet, 63100 Clermont Ferrand, France
    BMC Genomics 13:47. 2012
    ..Whole Genome Profiling (WGP™) was developed recently as a new sequence-based physical mapping technology and has the potential to limit this problem...
  4. pmc A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block
    James Breen
    Centre for Comparative Genomics, Murdoch University, Perth, Australia
    BMC Plant Biol 10:98. 2010
    ..The ctg1034 contig completed in this paper was initially studied because it was assigned to the Sr2 resistance locus region, but detailed mapping studies subsequently assigned it to the long arm of 3B and revealed its unusual features...
  5. pmc A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
    Jan Bartos
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    BMC Plant Biol 8:95. 2008
    ..1RS translocation. A better knowledge of the rye genome could facilitate rye improvement and increase the efficiency of utilizing rye genes in wheat breeding...
  6. pmc A new genomic resource dedicated to wood formation in Eucalyptus
    David Rengel
    UMR CNRS Université Toulouse III 5546, Pôle de Biotechnologies Végétales, 24 Chemin de Borde Rouge, BP42617 Auzeville, 31326 Castanet Tolosan, France
    BMC Plant Biol 9:36. 2009
    ..To this end, the sequencing, analysis and annotation of a large collection of expressed sequences tags (ESTs) from genes involved in wood formation in Eucalyptus would provide a valuable resource...
  7. pmc Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources
    Camille Rustenholz
    INRA UMR 1095, Génétique Diversité et Ecophysiologie des Céréales, 63100 Clermont Ferrand, France
    BMC Genomics 11:714. 2010
    ..This study aims at combining the unique genomic resources developed in wheat and barley to decipher the organisation of gene space on wheat chromosome 3B...
  8. doi Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat
    Etienne Paux
    INRA UBP UMR 1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont Ferrand, France
    Plant Biotechnol J 8:196-210. 2010
    ..All together, our results suggest that ISBP markers have the potential to lead to a breakthrough in wheat marker-assisted selection...
  9. doi Variation in crossover rates across a 3-Mb contig of bread wheat (Triticum aestivum) reveals the presence of a meiotic recombination hotspot
    Cyrille Saintenac
    UMR 1095, Genetics, Diversity and Ecophysiology of Cereals, INRA UBP, Domaine de Crouël, 234 avenue du Brezet, Clermont Ferrand, 63100, France
    Chromosoma 120:185-98. 2011
    ..A non-crossover event covering at least 453 bp was also identified in the same interval. From these results, we can conclude that gene content could be one of the factors driving recombination in bread wheat...
  10. pmc Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces
    Frédéric Choulet
    Institut National de la Recherche Agronomique, Universite Blaise Pascal, Unité Mixte de Recherche 1095 Genetics Diversity and Ecophysiology of Cereals, F 63100 Clermont Ferrand, France
    Plant Cell 22:1686-701. 2010
    ....
  11. doi Sequence-based marker development in wheat: advances and applications to breeding
    Etienne Paux
    INRA UBP 1095, Genetics Diversity and Ecophysiology of Cereals, 234 avenue du Brezet, Clermont Ferrand, France
    Biotechnol Adv 30:1071-88. 2012
    ..Finally, we discuss the advantages and limitations of marker-assisted selection for supporting wheat improvement...
  12. doi A physical map of the 1-gigabase bread wheat chromosome 3B
    Etienne Paux
    Institut National de la Recherche Agronomique, Université Blaise Pascal INRA UBP, UMR 1095, Genetics Diversity and Ecophysiology of Cereals, Clermont Ferrand, France
    Science 322:101-4. 2008
    ..This physical map establishes a template for the remaining wheat chromosomes and demonstrates the feasibility of constructing physical maps in large, complex, polyploid genomes with a chromosome-based approach...
  13. ncbi Physical mapping in large genomes: accelerating anchoring of BAC contigs to genetic maps through in silico analysis
    Etienne Paux
    INRA, UMR 1095, ASP, 234, avenue du Brézet, 63100, Clermont Ferrand, France
    Funct Integr Genomics 8:29-32. 2008
    ....