Research Topics

Mariette Jérôme

Summary

Affiliation: Institut National de la Recherche Agronomique
Country: France

Publications

  1. pmc The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
    Anthony Levasseur
    INRA, UMR1163 Biotechnologie des Champignons Filamenteux, Aix Marseille Universite, Polytech Marseille, 163 Avenue de Luminy, CP 925, 13288 Marseille Cedex 09, France
    BMC Genomics 15:486. 2014
  2. ncbi jvenn: an interactive Venn diagram viewer
    Philippe Bardou
    Plate forme bio informatique Genotoul MIA T, INRA, Borde Rouge, 31326 Castanet Tolosan, France
    BMC Bioinformatics 15:293. 2014
  3. pmc NG6: Integrated next generation sequencing storage and processing environment
    Jérôme Mariette
    Plate forme bio informatique Genotoul, INRA, Biométrie et Intelligence Artificielle, BP 52627, 31326, Castanet Tolosan Cedex, France
    BMC Genomics 13:462. 2012
  4. pmc Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool
    Mariette Jérôme
    Plate forme bio informatique Genotoul, INRA, Biométrie et Intelligence Artificielle Génétique Cellulaire, BP 52627, 31326 Castanet Tolosan Cedex, France
    BMC Res Notes 4:149. 2011

Collaborators

  • Jérôme Mariette
  • Christophe Klopp
  • Philippe Bardou
  • Anthony Levasseur
  • Celine Noirot
  • Frédéric Escudié
  • Ronald P de Vries
  • Didier Chevret
  • Francisco J Ruiz-Dueñas
  • Anne Lomascolo
  • Eva Boukhris-Uzan
  • Joohae Park
  • Ad Wiebenga
  • Aleksandrina Patyshakuliyeva
  • Jean Claude Sigoillot
  • Isabelle Benoit
  • Angel T Martinez
  • Yonathan Arfi
  • Arthur F J Ram
  • Philippe Gouret
  • Pedro M Coutinho
  • Claude Murat
  • Olivier Chabrol
  • Bernard Henrissat
  • Christophe Djemiel
  • Pierre Pontarotti
  • Min Jin Kwon
  • Mireille Haon
  • Vincent Lombard
  • Elodie Drula
  • Ursula Kües
  • Francis Martin
  • Eric Record
  • Francois Piumi
  • Laurence Lesage-Meessen
  • Han A B Wosten
  • Sylvain Thomas
  • Gérald Salin
  • Nicolas Allias

Detail Information

Publications4

  1. pmc The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
    Anthony Levasseur
    INRA, UMR1163 Biotechnologie des Champignons Filamenteux, Aix Marseille Universite, Polytech Marseille, 163 Avenue de Luminy, CP 925, 13288 Marseille Cedex 09, France
    BMC Genomics 15:486. 2014
    ..The wood-decayer Pycnoporus cinnabarinus is a model fungus for the study of plant cell wall decomposition and is used for a number of applications in green and white biotechnology...
  2. ncbi jvenn: an interactive Venn diagram viewer
    Philippe Bardou
    Plate forme bio informatique Genotoul MIA T, INRA, Borde Rouge, 31326 Castanet Tolosan, France
    BMC Bioinformatics 15:293. 2014
    ..However, when the number of input lists exceeds four, the diagram becomes difficult to read. Alternative layouts and dynamic display features can improve its use and its readability...
  3. pmc NG6: Integrated next generation sequencing storage and processing environment
    Jérôme Mariette
    Plate forme bio informatique Genotoul, INRA, Biométrie et Intelligence Artificielle, BP 52627, 31326, Castanet Tolosan Cedex, France
    BMC Genomics 13:462. 2012
    ..In such a context, it is important to provide these teams with an easily manageable environment to store and process the produced reads...
  4. pmc Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool
    Mariette Jérôme
    Plate forme bio informatique Genotoul, INRA, Biométrie et Intelligence Artificielle Génétique Cellulaire, BP 52627, 31326 Castanet Tolosan Cedex, France
    BMC Res Notes 4:149. 2011
    ..abstract:..