S Casaregola

Summary

Affiliation: Institut National de la Recherche Agronomique
Country: France

Publications

  1. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 17. Yarrowia lipolytica
    S Casaregola
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INA PG, INRA, UMR216, CNRS URA1925, Thiverval Grignon, France
    FEBS Lett 487:95-100. 2000
  2. doi request reprint New perspectives in hemiascomycetous yeast taxonomy
    Serge Casaregola
    INRA, UMR 1319, Micalis Institute, AgroParisTech, CIRM Levures, 78850 Thiverval Grignon, France
    C R Biol 334:590-8. 2011
  3. ncbi request reprint Ylli, a non-LTR retrotransposon L1 family in the dimorphic yeast Yarrowia lipolytica
    Serge Casaregola
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UR216, CNRS URA1925, INA PG, F 78850 Thiverval Grignon, France
    Mol Biol Evol 19:664-77. 2002
  4. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 7. Saccharomyces servazzii
    S Casaregola
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:47-51. 2000
  5. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 6. Saccharomyces exiguus
    E Bon
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:42-6. 2000
  6. ncbi request reprint A family of laboratory strains of Saccharomyces cerevisiae carry rearrangements involving chromosomes I and III
    S Casaregola
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA CNRS, INA PG, Thiverval Grignon, France
    Yeast 14:551-64. 1998
  7. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 9. Saccharomyces kluyveri
    C Neuveglise
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:56-60. 2000
  8. ncbi request reprint Genomic organization of the yeast Yarrowia lipolytica
    S Casaregola
    Collection de Levures d Intérêt Biotechnologique CLIB, Laboratoire de Genetique Moleculaire et Cellulaire, INRA CNRS INA PG, F 78850 Thiverval Grignon, France
    Chromosoma 106:380-90. 1997
  9. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 21. Comparative functional classification of genes
    C Gaillardin
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INA PG, INRA UMR216, CNRS URA1925, Thiverval Grignon, France
    FEBS Lett 487:134-49. 2000
  10. ncbi request reprint Homologous recombination and transposition generate chromosome I neopolymorphism during meiosis in Saccharomyces cerevisiae
    C Neuveglise
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA Centre de Grignon, Thiverval Grignon, France
    Mol Gen Genet 263:722-32. 2000

Collaborators

Detail Information

Publications25

  1. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 17. Yarrowia lipolytica
    S Casaregola
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INA PG, INRA, UMR216, CNRS URA1925, Thiverval Grignon, France
    FEBS Lett 487:95-100. 2000
    ..Matches to retrotransposons were observed, including a S. cerevisiae Ty3 and a LINE element. The sequences have been deposited with EMBL under the accession numbers AL409956-AL414895...
  2. doi request reprint New perspectives in hemiascomycetous yeast taxonomy
    Serge Casaregola
    INRA, UMR 1319, Micalis Institute, AgroParisTech, CIRM Levures, 78850 Thiverval Grignon, France
    C R Biol 334:590-8. 2011
    ..The future of yeast taxonomy will involve the sequencing of more genomes, thorough analysis of populations to obtain a good representation of the biodiversity and integration of these data into dedicated databases...
  3. ncbi request reprint Ylli, a non-LTR retrotransposon L1 family in the dimorphic yeast Yarrowia lipolytica
    Serge Casaregola
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UR216, CNRS URA1925, INA PG, F 78850 Thiverval Grignon, France
    Mol Biol Evol 19:664-77. 2002
    ..BLAST comparisons showed that ORF2 of Ylli is closely related to that of the slime mold Dictyostelium discoideum L1 family, TRE...
  4. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 7. Saccharomyces servazzii
    S Casaregola
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:47-51. 2000
    ..servazzii. The sequences have been deposited with EMBL under the accession numbers AL402279-AL404848...
  5. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 6. Saccharomyces exiguus
    E Bon
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:42-6. 2000
    ..cerevisiae. Unexpectedly, numerous duplicated genes were found whereas they are unique in S. cerevisiae. The sequences are deposited at EMBL under the accession numbers: AL407377-AL409955...
  6. ncbi request reprint A family of laboratory strains of Saccharomyces cerevisiae carry rearrangements involving chromosomes I and III
    S Casaregola
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA CNRS, INA PG, Thiverval Grignon, France
    Yeast 14:551-64. 1998
    ....
  7. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 9. Saccharomyces kluyveri
    C Neuveglise
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, Thiverval Grignon, France
    FEBS Lett 487:56-60. 2000
    ..cerevisiae, such as the catabolic pathway of purines or pyrimidines, melibiose fermentation, sorbitol utilization, or degradation of pollutants. The sequences are deposited in EMBL under the accession numbers AL404849-AL407376...
  8. ncbi request reprint Genomic organization of the yeast Yarrowia lipolytica
    S Casaregola
    Collection de Levures d Intérêt Biotechnologique CLIB, Laboratoire de Genetique Moleculaire et Cellulaire, INRA CNRS INA PG, F 78850 Thiverval Grignon, France
    Chromosoma 106:380-90. 1997
    ..lipolytica and that, despite an unprecedented chromosome length polymorphism, the overall structure of the genome is conserved in different isolates...
  9. ncbi request reprint Genomic exploration of the hemiascomycetous yeasts: 21. Comparative functional classification of genes
    C Gaillardin
    Collection de Levures d Intérêt Biotechnologie, Laboratoire de Genetique Moleculaire et Cellulaire, INA PG, INRA UMR216, CNRS URA1925, Thiverval Grignon, France
    FEBS Lett 487:134-49. 2000
    ..Yeast biological diversity seems thus to result from limited species-specific gene losses or duplications, and for a large part from rapid evolution of genes and regulatory factors dedicated to specific functions...
  10. ncbi request reprint Homologous recombination and transposition generate chromosome I neopolymorphism during meiosis in Saccharomyces cerevisiae
    C Neuveglise
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA Centre de Grignon, Thiverval Grignon, France
    Mol Gen Genet 263:722-32. 2000
    ..We demonstrated that a Tyl element had transposed within the translocated region of chromosome I, generating mutations in the 3' LTR, at the border between U5 and PBS...
  11. ncbi request reprint DNA probes specific for the yeast species Debaryomyces hansenii: useful tools for rapid identification
    M Corredor
    Collection de Levures d Intérêt Biotechnologique, Génétique Moléculaire et Cellulaire, CNRS URA1925, INRA UMR216, Institut National Agronomique Paris Grignon, 78850, Thiverval Grignon, France
    FEMS Microbiol Lett 193:171-7. 2000
    ..F01pro represents a new type of repeated element found in fungi, useful for both identification and typing of D. hansenii and, together with M18pro, simplifies the study of this species in complex flora...
  12. ncbi request reprint Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization
    S Casaregola
    Laboratoire de Genetique Moleculaire et Cellulaire, CNRS URA 1925, Institut National Agronomique, Thiverval Grignon, France
    Int J Syst Evol Microbiol 51:1607-18. 2001
    ....
  13. pmc Genomic evolution of the long terminal repeat retrotransposons in hemiascomycetous yeasts
    Cécile Neuvéglise
    Collection de Levures d Intérêt Biotechnologique, Laboratoire de Genetique Moleculaire et Cellulaire, INRA UMR216, CNRS URA1925, INA PG, BP01, F 78850 Thiverval Grignon, France
    Genome Res 12:930-43. 2002
    ....
  14. doi request reprint Delimitation of the species of the Debaryomyces hansenii complex by intron sequence analysis
    Noémie Jacques
    CIRM Levures, Laboratoire de Microbiologie et Genetique Moleculaire, INRA, CNRS, AgroParisTech, 78850 Thiverval Grignon, France
    Int J Syst Evol Microbiol 59:1242-51. 2009
    ..hansenii and genetic exchanges between these populations, indicating an unexpected genetic diversity within this part of the genus Debaryomyces...
  15. pmc Population polymorphism of nuclear mitochondrial DNA insertions reveals widespread diploidy associated with loss of heterozygosity in Debaryomyces hansenii
    Noémie Jacques
    CIRM Levures, Microbiologie et Genetique Moleculaire, INRA UMR 1238, CNRS UMR 2585, AgroParisTech, F 78850 Thiverval Grignon, France
    Eukaryot Cell 9:449-59. 2010
    ..hansenii is phylogenetically related, we observed a differential loss of heterozygosity in the diploid strains, which can explain some of the large genetic diversity found in D. hansenii over the years...
  16. pmc Mutator-like element in the yeast Yarrowia lipolytica displays multiple alternative splicings
    Cécile Neuvéglise
    Microbiologie et Genetique Moleculaire, INRA, CNRS Institut National Agronomique Paris Grignon, Thiverval Grignon, France
    Eukaryot Cell 4:615-24. 2005
    ..A study of the distribution of Mutyl in strains of the French lineage evidenced a recent transposition event. Taken together, these results indicate that Mutyl is still active...
  17. ncbi request reprint Identification and characterisation of LIP7 and LIP8 genes encoding two extracellular triacylglycerol lipases in the yeast Yarrowia lipolytica
    P Fickers
    Laboratoire Microbiologie et Génétique Moléculaire, UMR2585 CNRS INRA INAP G Institut National Agronomique Paris Grignon, F 78850 Thiverval Grignon, France
    Fungal Genet Biol 42:264-74. 2005
    ..lipolytica. The substrate specificity towards synthetic ester molecules indicates that Lip7p presented a maximum activity centred on caproate (C6) while that of Lip8p is in caprate (C10)...
  18. ncbi request reprint Safety assessment of dairy microorganisms: the hemiascomycetous yeasts
    Noémie Jacques
    CIRM Levures, Laboratoire de Microbiologie et Genetique Moleculaire, INRA, CNRS, AgroParisTech, F 78850 Thiverval Grignon, France
    Int J Food Microbiol 126:321-6. 2008
    ..As such yeasts in cheese cannot be considered to constitute a risk for healthy individuals...
  19. pmc Gene expression and biochemical analysis of cheese-ripening yeasts: focus on catabolism of L-methionine, lactate, and lactose
    Orianne Cholet
    UMR 782 Genie et Microbiologie des Procedes Alimentaires, INRA, F 78850 Thiverval Grignon, France
    Appl Environ Microbiol 73:2561-70. 2007
    ..Our data provide the first evidence that the use of a multispecies microarray could be a powerful tool to investigate targeted metabolism and possible metabolic interactions between species within microbial cocultures...
  20. ncbi request reprint Yeast ecology in French cider and black olive natural fermentations
    Emmanuel Coton
    Adria Normandie, Boulevard du 13 Juin 1944, 14310 Villers Bocage, France
    Int J Food Microbiol 108:130-5. 2006
    ..By using the rDNA ITS method, valuable information on yeast population biodiversity and dynamics in the naturally fermented food products studied was obtained...
  21. ncbi request reprint Genome evolution in yeasts
    Bernard Dujon
    Unité de Génétique Moléculaire des Levures, URA 2171 CNRS and UFR 927 Université Pierre et Marie Curie
    Nature 430:35-44. 2004
    ....
  22. pmc Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns
    Elisabeth Bon
    Laboratoire de Génétique Moléculaire et Cellulaire CNRS INRA, Institut National Agronomique Paris Grignon, F 78850 Thiverval Grignon, France
    Nucleic Acids Res 31:1121-35. 2003
    ....
  23. ncbi request reprint Kluyveromyces lactis and Saccharomyces cerevisiae, two potent deacidifying and volatile-sulphur-aroma-producing microorganisms of the cheese ecosystem
    Dafni Maria Kagkli
    Moorepark, Teagasc Research Center, Fermoy, Ireland, UK
    Appl Microbiol Biotechnol 73:434-42. 2006
    ..The deacidification activity which is of major importance in the early stages of cheese-ripening was also compared in S. cerevisiae and Kluyveromyces strains...
  24. ncbi request reprint The Kluyveromyces lactis repertoire of transcriptional regulators
    Francoise Bussereau
    Institut de Genetique et Microbiologie, UMR 8621 CNRS, Universite Paris Sud, Orsay, France
    FEMS Yeast Res 6:325-35. 2006
    ..These two aspects are discussed on the basis of available data...
  25. ncbi request reprint Intraspecific gene expression variability in the yeast Kluyveromyces lactis revealed by micro-array analysis
    Audrey Suleau
    Laboratoire de Microbiologie et Genetique Moleculaire, INRA UMR1238, CNRS INA PG UMR 2585, 78850 Thiverval Grignon, France
    FEMS Yeast Res 5:595-604. 2005
    ..We also showed that the two strains, although both originating from dairies, display unexpected differences in gene expression on each type of carbon source...