Nicolas Berthet

Summary

Affiliation: Institut Pasteur
Country: France

Publications

  1. pmc Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR
    Nicolas Berthet
    1Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    BMC Mol Biol 9:77. 2008
  2. pmc Application of high-density DNA resequencing microarray for detection and characterization of botulinum neurotoxin-producing clostridia
    Jessica Vanhomwegen
    Institut Pasteur, Laboratory for Urgent Responses to Biological Threats, Paris, France
    PLoS ONE 8:e67510. 2013
  3. pmc Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples
    Justine Cheval
    Institut Pasteur, Genotyping of Pathogens and Public Health Platform, 28 rue du Docteur Roux, F 75015 Paris, France
    J Clin Microbiol 49:3268-75. 2011
  4. pmc Use of consensus sequences for the design of high density resequencing microarrays: the influenza virus paradigm
    India Leclercq
    Institut Pasteur, Laboratory for Urgent Response to Biological Threats CIBU, Paris, France
    BMC Genomics 11:586. 2010
  5. pmc Massively parallel pathogen identification using high-density microarrays
    Nicolas Berthet
    Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    Microb Biotechnol 1:79-86. 2008
  6. pmc Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses
    Laurent Dacheux
    Institut Pasteur, Lyssavirus Dynamics and Host Adaptation Unit, Paris, France
    J Virol 84:9557-74. 2010
  7. pmc Recurrent Breast Abscesses due to Corynebacterium kroppenstedtii, a Human Pathogen Uncommon in Caucasian Women
    Anne Le Flèche-Matéos
    Institut Pasteur, Cellule d Intervention Biologique d Urgence CIBU, 75724 Paris, France
    Case Rep Infect Dis 2012:120968. 2012

Collaborators

Detail Information

Publications7

  1. pmc Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR
    Nicolas Berthet
    1Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    BMC Mol Biol 9:77. 2008
    ..We adapted the QuantiTect Whole Transcriptome Kit (Qiagen) to our purposes and designated the method as Whole Transcriptome Amplification (WTA)...
  2. pmc Application of high-density DNA resequencing microarray for detection and characterization of botulinum neurotoxin-producing clostridia
    Jessica Vanhomwegen
    Institut Pasteur, Laboratory for Urgent Responses to Biological Threats, Paris, France
    PLoS ONE 8:e67510. 2013
    ..The high diversity in nucleotide sequence and genetic organization of the gene cluster encoding the BoNT components poses a great challenge for the screening and characterization of BoNT-producing strains...
  3. pmc Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples
    Justine Cheval
    Institut Pasteur, Genotyping of Pathogens and Public Health Platform, 28 rue du Docteur Roux, F 75015 Paris, France
    J Clin Microbiol 49:3268-75. 2011
    ..When the virus load was sufficiently high, de novo assembly permitted the generation of long contigs corresponding to nearly full-length genomes and thus should facilitate the identification of novel viruses...
  4. pmc Use of consensus sequences for the design of high density resequencing microarrays: the influenza virus paradigm
    India Leclercq
    Institut Pasteur, Laboratory for Urgent Response to Biological Threats CIBU, Paris, France
    BMC Genomics 11:586. 2010
    ..The part dedicated to influenza viruses was based on consensus sequences specific for one gene generated from global alignments of a large number of influenza virus sequences available in databanks...
  5. pmc Massively parallel pathogen identification using high-density microarrays
    Nicolas Berthet
    Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    Microb Biotechnol 1:79-86. 2008
    ..Our results suggest this technology could be applied in a clinical setting to test for numerous pathogens in a rapid, sensitive and unbiased manner...
  6. pmc Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses
    Laurent Dacheux
    Institut Pasteur, Lyssavirus Dynamics and Host Adaptation Unit, Paris, France
    J Virol 84:9557-74. 2010
    ....
  7. pmc Recurrent Breast Abscesses due to Corynebacterium kroppenstedtii, a Human Pathogen Uncommon in Caucasian Women
    Anne Le Flèche-Matéos
    Institut Pasteur, Cellule d Intervention Biologique d Urgence CIBU, 75724 Paris, France
    Case Rep Infect Dis 2012:120968. 2012
    ..The current lack of such investigations, probably due to the difficulty to detect Ck, may cause the underestimation of such an aetiology...