Emmanuel Jp Douzery

Summary

Country: France

Publications

  1. ncbi request reprint OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals
    Emmanuel J P Douzery
    Institut des Sciences de l Evolution de Montpellier ISE M, UMR 5554 CNRS IRD, Universite Montpellier 2, Montpellier, France
    Mol Biol Evol 31:1923-8. 2014
  2. pmc A glimpse on the pattern of rodent diversification: a phylogenetic approach
    Pierre Henri Fabre
    Center for Macroecology, Evolution and Climate CMEC, Department of Biology, Zoological Museum, University of Copenhagen, Universitetsparken 15, DK 2100 Copenhagen, Denmark
    BMC Evol Biol 12:88. 2012
  3. pmc Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
    Tiratha Raj Singh
    Department of Zoology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Genomics 10:534. 2009
  4. pmc Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae)
    Juan S Escobar
    Institut National de la Recherche Agronomique, Centre de Montpellier, UMR Diversité et Adaptation des Plantes Cultivées, Domaine de Melgueil, 34130 Mauguio, France
    BMC Evol Biol 11:181. 2011
  5. pmc Are ribosomal DNA clusters rearrangement hotspots?: a case study in the genus Mus (Rodentia, Muridae)
    Benoîte Cazaux
    Institut des Sciences de l Evolution, UMR5554 CNRS Université Montpellier II, France
    BMC Evol Biol 11:124. 2011
  6. pmc An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models
    Georgia Tsagkogeorga
    Universite Montpellier 2, Institut des Sciences de l Evolution UMR 5554, CC064, Place Eugene Bataillon, 34095 Montpellier Cedex 05, France
    BMC Evol Biol 9:187. 2009
  7. pmc PhySIC_IST: cleaning source trees to infer more informative supertrees
    Celine Scornavacca
    Institut des Sciences de l Evolution ISEM, UMR 5554 CNRS, Universite Montpellier II, Place E, Bataillon CC 064 34095 Montpellier Cedex 5, France
    BMC Bioinformatics 9:413. 2008
  8. pmc OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics
    Vincent Ranwez
    Universite Montpellier 2, CC064, Place Eugene Bataillon, 34 095 Montpellier Cedex 05, France
    BMC Evol Biol 7:241. 2007

Collaborators

Detail Information

Publications8

  1. ncbi request reprint OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals
    Emmanuel J P Douzery
    Institut des Sciences de l Evolution de Montpellier ISE M, UMR 5554 CNRS IRD, Universite Montpellier 2, Montpellier, France
    Mol Biol Evol 31:1923-8. 2014
    ..OrthoMaM is available for browsing, query and complete or filtered downloads at http://www.orthomam.univ-montp2.fr/. ..
  2. pmc A glimpse on the pattern of rodent diversification: a phylogenetic approach
    Pierre Henri Fabre
    Center for Macroecology, Evolution and Climate CMEC, Department of Biology, Zoological Museum, University of Copenhagen, Universitetsparken 15, DK 2100 Copenhagen, Denmark
    BMC Evol Biol 12:88. 2012
    ..However, despite the increase of studies addressing the diversification patterns of organisms, no synthesis has addressed the case of the most diversified mammalian clade: the Rodentia...
  3. pmc Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
    Tiratha Raj Singh
    Department of Zoology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Genomics 10:534. 2009
    ..This peculiar evolutionary dynamics has hampered the reconstruction of tunicate phylogenetic relationships within chordates based on mitogenomic data...
  4. pmc Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae)
    Juan S Escobar
    Institut National de la Recherche Agronomique, Centre de Montpellier, UMR Diversité et Adaptation des Plantes Cultivées, Domaine de Melgueil, 34130 Mauguio, France
    BMC Evol Biol 11:181. 2011
    ....
  5. pmc Are ribosomal DNA clusters rearrangement hotspots?: a case study in the genus Mus (Rodentia, Muridae)
    Benoîte Cazaux
    Institut des Sciences de l Evolution, UMR5554 CNRS Université Montpellier II, France
    BMC Evol Biol 11:124. 2011
    ..The target model was the genus Mus which exhibits a high rate of karyotypic change, a large fraction of which involves centromeres...
  6. pmc An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models
    Georgia Tsagkogeorga
    Universite Montpellier 2, Institut des Sciences de l Evolution UMR 5554, CC064, Place Eugene Bataillon, 34095 Montpellier Cedex 05, France
    BMC Evol Biol 9:187. 2009
    ..Nonetheless, substantial uncertainty remains about the phylogenetic relationships and taxonomic status of key groups such as the Aplousobranchia, Appendicularia, and Thaliacea...
  7. pmc PhySIC_IST: cleaning source trees to infer more informative supertrees
    Celine Scornavacca
    Institut des Sciences de l Evolution ISEM, UMR 5554 CNRS, Universite Montpellier II, Place E, Bataillon CC 064 34095 Montpellier Cedex 5, France
    BMC Bioinformatics 9:413. 2008
    ..e. discard all conflicting resolutions. When the source trees host a significant number of topological conflicts or have a small taxon overlap, supertree methods of both kinds can propose poorly resolved, hence uninformative, supertrees...
  8. pmc OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics
    Vincent Ranwez
    Universite Montpellier 2, CC064, Place Eugene Bataillon, 34 095 Montpellier Cedex 05, France
    BMC Evol Biol 7:241. 2007
    ..Genomic data now provide the opportunity to select new markers that are potentially relevant for further resolving branches of the mammalian phylogenetic tree at various taxonomic levels...