Aurelie Bonin

Summary

Country: France

Publications

  1. ncbi How to track and assess genotyping errors in population genetics studies
    A Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Mol Ecol 13:3261-73. 2004
  2. ncbi Explorative genome scan to detect candidate loci for adaptation along a gradient of altitude in the common frog (Rana temporaria)
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, Grenoble, France
    Mol Biol Evol 23:773-83. 2006
  3. ncbi Use of amplified fragment length polymorphism (AFLP) markers in surveys of vertebrate diversity
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, Universite Joseph Fourier, F 38041 Grenoble Cedex 9, France
    Methods Enzymol 395:145-61. 2005
  4. ncbi Population adaptive index: a new method to help measure intraspecific genetic diversity and prioritize populations for conservation
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Conserv Biol 21:697-708. 2007
  5. pmc Candidate genes revealed by a genome scan for mosquito resistance to a bacterial insecticide: sequence and gene expression variations
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    BMC Genomics 10:551. 2009
  6. doi Genome scan in the mosquito Aedes rusticus: population structure and detection of positive selection after insecticide treatment
    Margot Paris
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Mol Ecol 19:325-37. 2010
  7. doi Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field
    Stephanie Manel
    Laboratoire Population Environnement Développement, UMR 151 UP IRD, Universite de Provence, 13331 Marseille Cedex 03, France
    Mol Ecol 19:3760-72. 2010
  8. ncbi Genotyping errors: causes, consequences and solutions
    François Pompanon
    Laboratoire d Ecologie Alpine, UMR CNRS 5553, Universite Joseph Fourier, B P 53, 38041 Grenoble Cedex 9, France
    Nat Rev Genet 6:847-59. 2005
  9. pmc A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    BMC Genomics 9:459. 2008
  10. doi Population genetics reveals origin and number of founders in a biological invasion
    Gentile Francesco Ficetola
    Laboratoire d Ecologie Alpine, UMR CNRS 5553, Universite de Savoie, 73376 Le Bourget du Lac cedex, France
    Mol Ecol 17:773-82. 2008

Detail Information

Publications11

  1. ncbi How to track and assess genotyping errors in population genetics studies
    A Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Mol Ecol 13:3261-73. 2004
    ....
  2. ncbi Explorative genome scan to detect candidate loci for adaptation along a gradient of altitude in the common frog (Rana temporaria)
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, Grenoble, France
    Mol Biol Evol 23:773-83. 2006
    ..Finally, we provided some preliminary insights into the genetic basis of adaptation along an altitudinal cline in the common frog...
  3. ncbi Use of amplified fragment length polymorphism (AFLP) markers in surveys of vertebrate diversity
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, Universite Joseph Fourier, F 38041 Grenoble Cedex 9, France
    Methods Enzymol 395:145-61. 2005
    ..Finally, this chapter proposes a troubleshooting guide to help resolve the main technical difficulties encountered during the AFLP procedure...
  4. ncbi Population adaptive index: a new method to help measure intraspecific genetic diversity and prioritize populations for conservation
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Conserv Biol 21:697-708. 2007
    ..Fourth, when neutral and adaptive results conflict, additional arguments (e.g., demography, ecology, and geographic proximity) should be considered together with levels of genetic diversity to determine a conservation strategy...
  5. pmc Candidate genes revealed by a genome scan for mosquito resistance to a bacterial insecticide: sequence and gene expression variations
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    BMC Genomics 10:551. 2009
    ..israelensis (Bti) insecticidal toxins...
  6. doi Genome scan in the mosquito Aedes rusticus: population structure and detection of positive selection after insecticide treatment
    Margot Paris
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    Mol Ecol 19:325-37. 2010
    ..Furthermore, this signal was detectable using genomic tools before any toxicological evidence for resistance could be identified...
  7. doi Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field
    Stephanie Manel
    Laboratoire Population Environnement Développement, UMR 151 UP IRD, Universite de Provence, 13331 Marseille Cedex 03, France
    Mol Ecol 19:3760-72. 2010
    ..Then, we describe available statistical approaches for integrating spatial dependence into landscape analyses of adaptive genetic variation...
  8. ncbi Genotyping errors: causes, consequences and solutions
    François Pompanon
    Laboratoire d Ecologie Alpine, UMR CNRS 5553, Universite Joseph Fourier, B P 53, 38041 Grenoble Cedex 9, France
    Nat Rev Genet 6:847-59. 2005
    ..We propose a protocol for estimating error rates and recommend that these measures be systemically reported to attest the reliability of published genotyping studies...
  9. pmc A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection
    Aurelie Bonin
    Laboratoire d Ecologie Alpine, CNRS UMR 5553, Universite Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France
    BMC Genomics 9:459. 2008
    ....
  10. doi Population genetics reveals origin and number of founders in a biological invasion
    Gentile Francesco Ficetola
    Laboratoire d Ecologie Alpine, UMR CNRS 5553, Universite de Savoie, 73376 Le Bourget du Lac cedex, France
    Mol Ecol 17:773-82. 2008
    ..This capability of invasion from a very small number of propagules challenges usual management strategies; species with such ability should be identified at an early stage of introduction...
  11. pmc Comparative analysis of response to selection with three insecticides in the dengue mosquito Aedes aegypti using mRNA sequencing
    Jean Philippe David
    Laboratoire d Ecologie Alpine LECA, UMR CNRS 5553, Grenoble, France
    BMC Genomics 15:174. 2014
    ....