Patrick J Babin

Summary

Country: France

Publications

  1. ncbi request reprint Molecular characterization, phylogenetic relationships, and developmental expression patterns of prion genes in zebrafish (Danio rerio)
    Emmanuelle Cotto
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, 33405 Talence Cedex, France
    FEBS J 272:500-13. 2005
  2. pmc Apolipocrustacein, formerly vitellogenin, is the major egg yolk precursor protein in decapod crustaceans and is homologous to insect apolipophorin II/I and vertebrate apolipoprotein B
    Jean Christophe Avarre
    Israel Oceanographic and Limnological Research, P O Box 8030, Haifa 31080, Israel
    BMC Evol Biol 7:3. 2007
  3. doi request reprint Conservation of a vitellogenin gene cluster in oviparous vertebrates and identification of its traces in the platypus genome
    Patrick J Babin
    Génomique et Physiologie des Poissons, Universite Bordeaux 1, UMR NuAGe, 33405 Talence, France
    Gene 413:76-82. 2008
  4. ncbi request reprint Conserved expression of alternative splicing variants of peroxisomal acyl-CoA oxidase 1 in vertebrates and developmental and nutritional regulation in fish
    Sofia Morais
    Génomique et Physiologie des Poissons, Universite Bordeaux 1, UMR NuAGe, 33405 Talence Cedex, France
    Physiol Genomics 28:239-52. 2007
  5. ncbi request reprint Epidermal transient down-regulation of retinol-binding protein 4 and mirror expression of apolipoprotein Eb and estrogen receptor 2a during zebrafish fin and scale development
    Angèle Tingaud-Sequeira
    Génomique et Physiologie des Poissons, UMR NuAGe, Universite Bordeaux 1, 33405 Talence Cedex, France
    Dev Dyn 235:3071-9. 2006
  6. ncbi request reprint Developmental expression and nutritional regulation of a zebrafish gene homologous to mammalian microsomal triglyceride transfer protein large subunit
    Esther Marza
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, 33405 Talence Cedex, France
    Dev Dyn 232:506-18. 2005
  7. pmc Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals
    Anja Knoll-Gellida
    Génomique et Physiologie des Poissons, UMR NuAGe, Universite Bordeaux 1, 33405 Talence Cedex, France
    BMC Genomics 7:46. 2006
  8. doi request reprint The evolution of plasma cholesterol: direct utility or a "spandrel" of hepatic lipid metabolism?
    Patrick J Babin
    Universite Bordeaux 1, Génomique et Physiologie des Poissons, UMR NuAGe, 33405 Talence, France
    Prog Lipid Res 48:73-91. 2009
  9. ncbi request reprint Expression patterns of three estrogen receptor genes during zebrafish (Danio rerio) development: evidence for high expression in neuromasts
    Angèle Tingaud-Sequeira
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, Avenue des Facultes, Bat B2, 33405 Talence Cedex, France
    Gene Expr Patterns 4:561-8. 2004
  10. ncbi request reprint High transcript level of fatty acid-binding protein 11 but not of very low-density lipoprotein receptor is correlated to ovarian follicle atresia in a teleost fish (Solea senegalensis)
    Maria J Agulleiro
    Institut de Recerca i Tecnologia Agroalimentàries Center of Aquaculture, Sant Carles de la Ràpita, Tarragona 43540, Spain
    Biol Reprod 77:504-16. 2007

Collaborators

Detail Information

Publications12

  1. ncbi request reprint Molecular characterization, phylogenetic relationships, and developmental expression patterns of prion genes in zebrafish (Danio rerio)
    Emmanuelle Cotto
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, 33405 Talence Cedex, France
    FEBS J 272:500-13. 2005
    ....
  2. pmc Apolipocrustacein, formerly vitellogenin, is the major egg yolk precursor protein in decapod crustaceans and is homologous to insect apolipophorin II/I and vertebrate apolipoprotein B
    Jean Christophe Avarre
    Israel Oceanographic and Limnological Research, P O Box 8030, Haifa 31080, Israel
    BMC Evol Biol 7:3. 2007
    ..In most oviparous species, Vtg, a large glycolipoprotein, is the main egg yolk precursor protein...
  3. doi request reprint Conservation of a vitellogenin gene cluster in oviparous vertebrates and identification of its traces in the platypus genome
    Patrick J Babin
    Génomique et Physiologie des Poissons, Universite Bordeaux 1, UMR NuAGe, 33405 Talence, France
    Gene 413:76-82. 2008
    ....
  4. ncbi request reprint Conserved expression of alternative splicing variants of peroxisomal acyl-CoA oxidase 1 in vertebrates and developmental and nutritional regulation in fish
    Sofia Morais
    Génomique et Physiologie des Poissons, Universite Bordeaux 1, UMR NuAGe, 33405 Talence Cedex, France
    Physiol Genomics 28:239-52. 2007
    ..Taken together, these data indicate that ACOX1 alternative splicing isoforms play a key conserved role in the vertebrate fatty acid metabolism...
  5. ncbi request reprint Epidermal transient down-regulation of retinol-binding protein 4 and mirror expression of apolipoprotein Eb and estrogen receptor 2a during zebrafish fin and scale development
    Angèle Tingaud-Sequeira
    Génomique et Physiologie des Poissons, UMR NuAGe, Universite Bordeaux 1, 33405 Talence Cedex, France
    Dev Dyn 235:3071-9. 2006
    ..As this inhibitor is commonly used to block obscuring pigmentation during in situ hybridization studies, this finding suggests that PTU should be used with caution, particularly in studying skin development...
  6. ncbi request reprint Developmental expression and nutritional regulation of a zebrafish gene homologous to mammalian microsomal triglyceride transfer protein large subunit
    Esther Marza
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, 33405 Talence Cedex, France
    Dev Dyn 232:506-18. 2005
    ....
  7. pmc Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals
    Anja Knoll-Gellida
    Génomique et Physiologie des Poissons, UMR NuAGe, Universite Bordeaux 1, 33405 Talence Cedex, France
    BMC Genomics 7:46. 2006
    ..The data obtained were compared with ovary/follicle/egg molecular phenotypes of other animals, published or available in public sequence databases...
  8. doi request reprint The evolution of plasma cholesterol: direct utility or a "spandrel" of hepatic lipid metabolism?
    Patrick J Babin
    Universite Bordeaux 1, Génomique et Physiologie des Poissons, UMR NuAGe, 33405 Talence, France
    Prog Lipid Res 48:73-91. 2009
    ..As causes of historical origin must be separated from current utilities, our spandrel-LDL theory proposes that LDL is a spandrel of VLDL selection, which appeared non-adaptively and may later have become crucial for vertebrate fitness...
  9. ncbi request reprint Expression patterns of three estrogen receptor genes during zebrafish (Danio rerio) development: evidence for high expression in neuromasts
    Angèle Tingaud-Sequeira
    Laboratoire Génomique et Physiologie des Poissons, UMR 1067 NUAGE INRA IFREMER, Universite Bordeaux 1, Avenue des Facultes, Bat B2, 33405 Talence Cedex, France
    Gene Expr Patterns 4:561-8. 2004
    ..From 6 dpf onward, esr2a and esr2b transcripts are robustly co-expressed in primary neuromasts, branchial arches, pectoral fins, and anal papilla, while slight labeling is observed for esr1 transcripts...
  10. ncbi request reprint High transcript level of fatty acid-binding protein 11 but not of very low-density lipoprotein receptor is correlated to ovarian follicle atresia in a teleost fish (Solea senegalensis)
    Maria J Agulleiro
    Institut de Recerca i Tecnologia Agroalimentàries Center of Aquaculture, Sant Carles de la Ràpita, Tarragona 43540, Spain
    Biol Reprod 77:504-16. 2007
    ....
  11. ncbi request reprint BLT-1, a specific inhibitor of the HDL receptor SR-BI, induces a copper-dependent phenotype during zebrafish development
    Demetrio Raldua
    Laboratory of Environmental Toxicology UPC, CN150, 08220 Terrassa, Spain
    Toxicol Lett 175:1-7. 2007
    ....
  12. doi request reprint Clofibrate and gemfibrozil induce an embryonic malabsorption syndrome in zebrafish
    Demetrio Raldua
    Laboratory of Environmental Toxicology UPC, CN150, 08220 Terrassa, Spain
    Toxicol Appl Pharmacol 228:301-14. 2008
    ..Fibrate-induced EMS in zebrafish seems useful for studying the morphogenetic consequences of impaired nutrient availability during the early stages of vertebrate development...