Sami Oikarinen

Summary

Affiliation: University of Tampere
Country: Finland

Publications

  1. doi PCR inhibition in stool samples in relation to age of infants
    Sami Oikarinen
    JDRF Center for the Prevention of Type 1 Diabetes in Finland, Finland
    J Clin Virol 44:211-4. 2009
  2. pmc Enterovirus RNA in blood is linked to the development of type 1 diabetes
    Sami Oikarinen
    Department of Virology, University of Tampere, Finland
    Diabetes 60:276-9. 2011
  3. doi Human rhinoviruses including group C are common in stool samples of young Finnish children
    Hanna Honkanen
    University of Tampere, School of Medicine, Tampere, Finland
    J Clin Virol 56:250-4. 2013
  4. doi Human parechoviruses are frequently detected in stool of healthy Finnish children
    Pekka Kolehmainen
    Department of Virology, School of Medicine, University of Tampere, Tampere, Finland
    J Clin Virol 54:156-61. 2012
  5. pmc Type 1 diabetes is associated with enterovirus infection in gut mucosa
    Maarit Oikarinen
    Department of Virology, School of Medicine, University of Tampere, Tampere, Finland
    Diabetes 61:687-91. 2012
  6. doi Human enterovirus 71 strains in the background population and in hospital patients in Finland
    Hanna Honkanen
    University of Tampere, Tampere, Finland
    J Clin Virol 56:348-53. 2013
  7. doi Virus antibody survey in different European populations indicates risk association between coxsackievirus B1 and type 1 diabetes
    Sami Oikarinen
    Department of Virology, University of Tampere, Tampere, Finland
    Diabetes 63:655-62. 2014
  8. doi Enteroviruses in the pathogenesis of type 1 diabetes
    Sisko Tauriainen
    Department of Virology, Medical School, University of Tampere, Biokatu 10, FIN 33520, Tampere, Finland
    Semin Immunopathol 33:45-55. 2011
  9. doi Temporal relationship between human parechovirus 1 infection and otitis media in young children
    Sisko Tauriainen
    Dept of Virology, University of Tampere Medical School, 33014 University of Tampere, Tampere, Finland
    J Infect Dis 198:35-40. 2008
  10. ncbi Human parechovirus 1 infections in young children--no association with type 1 diabetes
    Sisko Tauriainen
    JDRF Center for Prevention of Type 1 Diabetes, Tampere, Finland
    J Med Virol 79:457-62. 2007

Collaborators

Detail Information

Publications15

  1. doi PCR inhibition in stool samples in relation to age of infants
    Sami Oikarinen
    JDRF Center for the Prevention of Type 1 Diabetes in Finland, Finland
    J Clin Virol 44:211-4. 2009
    ..PCR is rapidly replacing traditional methods in diagnostic virus laboratories. PCR inhibitors, which are often present in clinical samples, may lead to false negative test results...
  2. pmc Enterovirus RNA in blood is linked to the development of type 1 diabetes
    Sami Oikarinen
    Department of Virology, University of Tampere, Finland
    Diabetes 60:276-9. 2011
    ..Further, to study the role of enteroviruses in both the initiation of the process and the progression to type 1 diabetes...
  3. doi Human rhinoviruses including group C are common in stool samples of young Finnish children
    Hanna Honkanen
    University of Tampere, School of Medicine, Tampere, Finland
    J Clin Virol 56:250-4. 2013
    ..They have been widely studied in respiratory samples in hospital patient series but only a few studies have been performed to assess their occurrence in other sample types and their circulation in healthy children background population...
  4. doi Human parechoviruses are frequently detected in stool of healthy Finnish children
    Pekka Kolehmainen
    Department of Virology, School of Medicine, University of Tampere, Tampere, Finland
    J Clin Virol 54:156-61. 2012
    ..Human parechoviruses (HPeVs) are common viruses mainly infecting young children. Most infections are mild, but HPeV3 causes severe CNS infections in new-born infants...
  5. pmc Type 1 diabetes is associated with enterovirus infection in gut mucosa
    Maarit Oikarinen
    Department of Virology, School of Medicine, University of Tampere, Tampere, Finland
    Diabetes 61:687-91. 2012
    ..This finding opens new opportunities for studying the viral etiology of type 1 diabetes...
  6. doi Human enterovirus 71 strains in the background population and in hospital patients in Finland
    Hanna Honkanen
    University of Tampere, Tampere, Finland
    J Clin Virol 56:348-53. 2013
    ..Human enterovirus 71 (HEV71) is a common cause of severe outbreaks of hand-foot- and mouth disease, aseptic meningitis and encephalitis in Asian populations but has not caused such epidemics in all populations...
  7. doi Virus antibody survey in different European populations indicates risk association between coxsackievirus B1 and type 1 diabetes
    Sami Oikarinen
    Department of Virology, University of Tampere, Tampere, Finland
    Diabetes 63:655-62. 2014
    ..The results support previous studies that suggested an association between CVBs and type 1 diabetes, highlighting the possible role of CVB1 as a diabetogenic virus type. ..
  8. doi Enteroviruses in the pathogenesis of type 1 diabetes
    Sisko Tauriainen
    Department of Virology, Medical School, University of Tampere, Biokatu 10, FIN 33520, Tampere, Finland
    Semin Immunopathol 33:45-55. 2011
    ..These findings open also new opportunities to explore the underlying mechanism and get closer to causal relationship...
  9. doi Temporal relationship between human parechovirus 1 infection and otitis media in young children
    Sisko Tauriainen
    Dept of Virology, University of Tampere Medical School, 33014 University of Tampere, Tampere, Finland
    J Infect Dis 198:35-40. 2008
    ..Because clinical symptoms are poorly documented, we evaluated the symptoms associated with HPeV1 infection in a cohort of children followed prospectively from birth at 3-month intervals...
  10. ncbi Human parechovirus 1 infections in young children--no association with type 1 diabetes
    Sisko Tauriainen
    JDRF Center for Prevention of Type 1 Diabetes, Tampere, Finland
    J Med Virol 79:457-62. 2007
    ..No difference was found in infection frequency between boys and girls, nor between prediabetic, diabetic and control subjects. Most infections (87%) occurred during autumn, winter and spring...
  11. pmc Virus infections as potential targets of preventive treatments for type 1 diabetes
    Noora Nurminen
    Department of Virology, School of Medicine, University of Tampere, Tampere, Finland
    Rev Diabet Stud 9:260-71. 2012
    ..Also, new sequencing technologies will provide additional information about the whole virome, which could enable the discovery of new candidate viruses. ..
  12. doi Human parechovirus as a minor cause of acute otitis media in children
    Saara Sillanpää
    Department of Anatomy, School of Medicine, University of Tampere, 33520 Tampere, Finland Department of Otorhinolaryngology, Head and Neck Surgery, Tampere University Hospital and School of Medicine, University of Tampere, 33520 Tampere, Finland Electronic address
    J Clin Virol 62:106-9. 2015
    ..One patient was positive in both stool and MEF samples. The results suggest that HPeV may play a role in some AOM cases, but it is not a major cause of AOM in children. ..
  13. pmc High-throughput multiplex quantitative polymerase chain reaction method for Giardia lamblia and Cryptosporidium species detection in stool samples
    Noora Nurminen
    Department of Virology, School of Medicine, University of Tampere, Finland Department for International Health, School of Medicine, University of Tampere, Finland School of Public Health and Family Medicine, College of Medicine, University of Malawi, Blantyre, Malawi Department of Pediatrics, Tampere University Hospital, Tampere, Finland Fimlab Laboratories, Pirkanmaa Hospital District, Tampere, Finland
    Am J Trop Med Hyg 92:1222-6. 2015
    ..In conclusion, the developed method is suitable for large-scale studies evaluating the occurrence of G. lamblia and Cryptosporidium spp. in endemic regions and for clinical diagnostics of these infections. ..
  14. doi Coxsackievirus B1 reveals strain specific differences in plasmacytoid dendritic cell mediated immunogenicity
    Sanna Hämäläinen
    Immunoregulation, BioMediTech, University of Tampere, Tampere, Finland
    J Med Virol 86:1412-20. 2014
    ..It is possible that the immunotype of the virus modulates the course of the infection and plays a role in the pathogenesis of chronic immune-mediated enterovirus diseases...
  15. ncbi Amplifying control RNA for RT-PCR applications by nucleic acid sequence based amplification (NASBA)
    Sisko Tauriainen
    Department of Virology, University of Tampere, Medical School, Biokatu 10, FIN 33520 Tampere, Finland
    J Virol Methods 132:222-6. 2006
    ..Generated RNA fragments were 195-714 bases long, of positive polarity and the amount of RNA was sufficient for thousands of RT-PCR reactions depending on the sensitivity of the RT-PCR...