Simon R Ellwood

Summary

Publications

  1. doi request reprint Evolution of three Pyrenophora cereal pathogens: recent divergence, speciation and evolution of non-coding DNA
    Simon R Ellwood
    Department of Environment and Agriculture, Curtin University, Bentley, Perth, Western Australia 6102, Australia
    Fungal Genet Biol 49:825-9. 2012
  2. pmc A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
    Simon R Ellwood
    Department of Environment and Agriculture, Curtin University, Kent Street, Bentley, Perth, Western Australia 6102, Australia
    Genome Biol 11:R109. 2010
  3. pmc CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
    Alison C Testa
    Centre for Crop and Disease Management, Department of Environment and Agriculture, School of Science, Curtin University, Bentley, WA, 6102, Australia
    BMC Genomics 16:170. 2015
  4. doi request reprint Phoma medicaginis stimulates the induction of the octadecanoid and phenylpropanoid pathways in Medicago truncatula
    Lars G Kamphuis
    CSIRO Plant Industry, Wembley, Perth, WA 6913, Australia
    Mol Plant Pathol 13:593-603. 2012
  5. doi request reprint CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
    Alison C Testa
    Centre for Crop and Disease Management, Department of Environment and Agriculture, School of Science, Curtin University, Bentley, WA, 6102, Australia
    BMC Genomics 16:1344. 2015
  6. ncbi request reprint Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris
    Huyen T T Phan
    Australian Centre for Nectrotropic Fungal Pathogens, State Agricultural Biotechnology Centre, Department of Health Sciences, Murdoch University, Perth, WA 6150, Australia
    Theor Appl Genet 114:549-58. 2007

Collaborators

Detail Information

Publications6

  1. doi request reprint Evolution of three Pyrenophora cereal pathogens: recent divergence, speciation and evolution of non-coding DNA
    Simon R Ellwood
    Department of Environment and Agriculture, Curtin University, Bentley, Perth, Western Australia 6102, Australia
    Fungal Genet Biol 49:825-9. 2012
    ..teresf. teres and P. teresf. maculata are closely related but autonomous. The results are discussed in the context of speciation and the evolution of intergenic regions...
  2. pmc A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
    Simon R Ellwood
    Department of Environment and Agriculture, Curtin University, Kent Street, Bentley, Perth, Western Australia 6102, Australia
    Genome Biol 11:R109. 2010
    ..The assembly was validated by comparison to BAC sequences, ESTs, orthologous genes and by PCR, and complemented by cytogenetic karyotyping and the first genome-wide genetic map for P. teres f. teres...
  3. pmc CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
    Alison C Testa
    Centre for Crop and Disease Management, Department of Environment and Agriculture, School of Science, Curtin University, Bentley, WA, 6102, Australia
    BMC Genomics 16:170. 2015
    ....
  4. doi request reprint Phoma medicaginis stimulates the induction of the octadecanoid and phenylpropanoid pathways in Medicago truncatula
    Lars G Kamphuis
    CSIRO Plant Industry, Wembley, Perth, WA 6913, Australia
    Mol Plant Pathol 13:593-603. 2012
    ..Taken together, these results highlight the importance of the octadecanoid and phenylpropanoid pathways in defence against this necrotrophic pathogen...
  5. doi request reprint CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
    Alison C Testa
    Centre for Crop and Disease Management, Department of Environment and Agriculture, School of Science, Curtin University, Bentley, WA, 6102, Australia
    BMC Genomics 16:1344. 2015
    ....
  6. ncbi request reprint Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris
    Huyen T T Phan
    Australian Centre for Nectrotropic Fungal Pathogens, State Agricultural Biotechnology Centre, Department of Health Sciences, Murdoch University, Perth, WA 6150, Australia
    Theor Appl Genet 114:549-58. 2007
    ..The composite map presented, anchored with orthologous markers mapped in M. truncatula, provides a strong foundation for the future use of genomic and genetic information in lentil genetic analysis and breeding...