Helena F Deus

Summary

Publications

  1. pmc Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient
    Arlin Stoltzfus
    Institute for Bioscience and Biotechnology Research, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
    BMC Bioinformatics 14:158. 2013
  2. doi request reprint Translating standards into practice - one Semantic Web API for Gene Expression
    Helena F Deus
    Digital Enterprise Research Institute DERI, National University of Ireland, Galway, Ireland
    J Biomed Inform 45:782-94. 2012
  3. pmc S3QL: a distributed domain specific language for controlled semantic integration of life sciences data
    Helena F Deus
    Digital Enterprise Research Institute, National University of Ireland at Galway, IDA Business Park, Lower Dangan, Galway, Ireland
    BMC Bioinformatics 12:285. 2011

Collaborators

Detail Information

Publications3

  1. pmc Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient
    Arlin Stoltzfus
    Institute for Bioscience and Biotechnology Research, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
    BMC Bioinformatics 14:158. 2013
    ..Such a system could become a sustainable community resource if implemented as a distributed system of loosely coupled parts that interact through clearly defined interfaces...
  2. doi request reprint Translating standards into practice - one Semantic Web API for Gene Expression
    Helena F Deus
    Digital Enterprise Research Institute DERI, National University of Ireland, Galway, Ireland
    J Biomed Inform 45:782-94. 2012
    ..We discuss how our integrative approach can encourage reuse of the Experimental Factor Ontology (EFO) and the Ontology for Biomedical Investigations (OBIs) for the reporting of experimental context and results of gene expression studies...
  3. pmc S3QL: a distributed domain specific language for controlled semantic integration of life sciences data
    Helena F Deus
    Digital Enterprise Research Institute, National University of Ireland at Galway, IDA Business Park, Lower Dangan, Galway, Ireland
    BMC Bioinformatics 12:285. 2011
    ..In this report we present a domain specific language, the S3DB query language (S3QL), to operate on its underlying core model and facilitate management of Linked Data...