Research Topics
| Henrik HornshøjSummaryAffiliation: Danish Institute of Agricultural Sciences Country: Denmark Publications
| Collaborators
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Detail Information
Publications
Gene expression profiles in liver of pigs with extreme high and low levels of androstenoneMaren Moe
The Norwegian Pig Breeders Association NORSVIN, Hamar, Norway
BMC Vet Res 4:29. 2008..In this study, microarrays were used to identify differentially expressed genes and pathways related to androstenone metabolism in the liver from boars with extreme levels of androstenone in adipose tissue...- Gene set analysis methods applied to chicken microarray expression dataAxel Skarman
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, Aarhus University, DK 8830 Tjele, Denmark
BMC Proc 3:S8. 2009..Methods for predicting the possible annotations for genes with unknown function from the expression data at hand could be useful, but our results indicate that careful validation of the predictions is needed... - Using microarrays to identify positional candidate genes for QTL: the case study of ACTH response in pigsVincent Jouffe
Laboratoire PsyNuGen, INRA UMR1286, CNRS UMR5226, , , F 33076 Bordeaux, France
BMC Proc 3:S14. 2009..The results illustrate the challenges that must be addressed but also provide a roadmap for future work that is applicable to other non-model species... - Comparative analysis of protein coding sequences from human, mouse and the domesticated pigFrank Grønlund Jørgensen
Department of Ecology and Genetics, University of Aarhus, Aarhus C, Denmark
BMC Biol 3:2. 2005.... 
SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experimentsHenrik Hornshøj
Department of Animal Breeding and Genetics, Danish Institute of Agricultural Sciences, Research Center Foulum, DK 8830 Tjele, Denmark
Bioinformatics 20:428-9. 2004..SEPON allows user-defined filtering, predicts exon location, assigns penalty based on 3' distance, GC content, secondary structure T(m) and non-target T(m) and ranks oligonucleotides for optimal selection...- Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologiesHenrik Hornshøj
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, Aarhus University, Tjele, Denmark
BMC Genomics 10:30. 2009..Furthermore, most comparisons of transcript and protein levels have been based on absolute expression values from within the same tissue and not relative expression values based on tissue ratios... - SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotationFrank Panitz
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, University of Aarhus, DK 8830 Tjele, Denmark
Bioinformatics 23:i387-91. 2007..In addition, it supports direct manual annotation, which is immediately accessible and can be easily shared with external collaborators... 
Gene expression profiling of porcine skeletal muscle in the early recovery phase following acute physical activityJeanette H Jensen
Aarhus University, Department of Molecular Biology and Genetics, Blichers Alle, DK 8830, Tjele, Denmark
Exp Physiol 97:833-48. 2012..These findings expand the complexity of pathways affected by acute contractile activity of skeletal muscle, contributing to a better understanding of the molecular processes that occur in muscle tissue in the recovery phase...- A robust linkage map of the porcine autosomes based on gene-associated SNPsRikke K K Vingborg
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, Aarhus University, Tjele, Denmark
BMC Genomics 10:134. 2009..The SNPs were identified in sequence alignments of 4,600 different amplicons obtained from the 12 boars and containing coding regions of genes derived from expressed sequence tags (ESTs) and genomic shotgun sequences... - Microarray expression profiles of 20.000 genes across 23 healthy porcine tissuesHenrik Hornshøj
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, University of Aarhus, Tjele, Denmark
PLoS ONE 2:e1203. 2007..For mammalian species, cataloging of the global gene expression profiles in large tissue collections under normal conditions have been focusing on human and mouse genomes but is lacking for the pig genome... - Molecular characterisation of the early response in pigs to experimental infection with Actinobacillus pleuropneumoniae using cDNA microarraysJakob Hedegaard
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, University of Aarhus, Research Centre Foulum, Tjele, Denmark
Acta Vet Scand 49:11. 2007..The objective of this study was hence to characterise the transcriptional response, measured by using cDNA microarrays, in pigs 24 hours after experimental inoculation with A. pleuropneumoniae... - Effects of bacterial colonization on the porcine intestinal proteomeMarianne Danielsen
Department of Animal Health, Welfare and Nutrition, Faculty of Agricultural Sciences, University of Aarhus, 8830 Tjele, Denmark
J Proteome Res 6:2596-604. 2007..Regulations related to L. fermentum colonization involved individual markers for immunoregulatory mechanisms... - Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)Peter Sørensen
University of Aarhus, Faculty of Agricultural Sciences, Dept of Genetics and Biotechnology, PO Box 50 DK 8830 Tjele, Denmark
Genet Sel Evol 39:651-68. 2007..The main result from these analyses was that gene sets involved in immune defence responses were differentially expressed...