Edita Karosiene

Summary

Affiliation: Center for Biological Sequence Analysis
Country: Denmark

Publications

  1. doi request reprint NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ
    Edita Karosiene
    Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, 2800, Lyngby, Denmark
    Immunogenetics 65:711-24. 2013
  2. doi request reprint NetMHCcons: a consensus method for the major histocompatibility complex class I predictions
    Edita Karosiene
    Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark
    Immunogenetics 64:177-86. 2012
  3. doi request reprint Bioinformatics identification of antigenic peptide: predicting the specificity of major MHC class I and II pathway players
    Ole Lund
    Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark
    Methods Mol Biol 960:247-60. 2013

Detail Information

Publications3

  1. doi request reprint NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ
    Edita Karosiene
    Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, 2800, Lyngby, Denmark
    Immunogenetics 65:711-24. 2013
    ..0 method is the first pan-specific predictor covering all HLA class II molecules with known sequences including HLA-DR, HLA-DP, and HLA-DQ. The NetMHCpan-3.0 method is available at http://www.cbs.dtu.dk/services/NetMHCIIpan-3.0 . ..
  2. doi request reprint NetMHCcons: a consensus method for the major histocompatibility complex class I predictions
    Edita Karosiene
    Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark
    Immunogenetics 64:177-86. 2012
    ..The final method, NetMHCcons, is publicly available at www.cbs.dtu.dk/services/NetMHCcons , and allows the user in an automatic manner to obtain the most accurate predictions for any given MHC molecule...
  3. doi request reprint Bioinformatics identification of antigenic peptide: predicting the specificity of major MHC class I and II pathway players
    Ole Lund
    Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark
    Methods Mol Biol 960:247-60. 2013
    ..This wide usage has led to the confusion of defining which of the many methods to use for what problems. In this chapter, an overview is given focusing on the suite of tools developed at the Technical University of Denmark...