Frank Dehne

Summary

Publications

  1. pmc Bridging the gap between systems biology and medicine
    Gilles Clermont
    Department of Critical Care Medicine and CRISMA laboratory, University of Pittsburgh School of Medicine, Scaife 602, 3550 Terrace, Pittsburgh, PA 15261, USA
    Genome Med 1:88. 2009
  2. pmc Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences
    Adam Amos-Binks
    School of Computer Science, Carleton University, Ottawa, ON K1S5B6, Canada
    BMC Bioinformatics 12:225. 2011
  3. pmc PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs
    Sylvain Pitre
    School of Computer Science, Carleton University, Ottawa, Canada
    BMC Bioinformatics 7:365. 2006

Collaborators

  • Sylvain Pitre
  • Adam Amos-Binks
  • Gilles Clermont
  • Ashkan Golshani
  • Andrew Schoenrock
  • Yuan Gui
  • Catalin Patulea
  • James R Green
  • Michael A Langston
  • Mikael Benson
  • Jesper Tegner
  • Bruce J Aronow
  • David M Rocke
  • Charles Auffray
  • Daniel Dalevi
  • Peter Raasch
  • Yves Moreau
  • Devdatt Dubhashi
  • Dana R Marshall
  • Paolo Provero
  • Jim Cheetham
  • Xuemei Luo
  • Albert Chan
  • Mathew Jessulat
  • Alex Duong
  • Nevan Krogan
  • Marinella Gebbia
  • Jack Greenblatt
  • Andrew Emili

Detail Information

Publications3

  1. pmc Bridging the gap between systems biology and medicine
    Gilles Clermont
    Department of Critical Care Medicine and CRISMA laboratory, University of Pittsburgh School of Medicine, Scaife 602, 3550 Terrace, Pittsburgh, PA 15261, USA
    Genome Med 1:88. 2009
    ....
  2. pmc Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences
    Adam Amos-Binks
    School of Computer Science, Carleton University, Ottawa, ON K1S5B6, Canada
    BMC Bioinformatics 12:225. 2011
    ..PIPE-Sites operates at high specificity and requires only the sequences of query proteins and a database of known binary interactions with no binding site data, making it applicable to binding site prediction at the proteome-scale...
  3. pmc PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs
    Sylvain Pitre
    School of Computer Science, Carleton University, Ottawa, Canada
    BMC Bioinformatics 7:365. 2006
    ..Consequently there is a growing need for the development of computational tools that are capable of effectively identifying such interactions...