Frank Dehne

Summary

Publications

  1. pmc Bridging the gap between systems biology and medicine
    Gilles Clermont
    Department of Critical Care Medicine and CRISMA laboratory, University of Pittsburgh School of Medicine, Scaife 602, 3550 Terrace, Pittsburgh, PA 15261, USA
    Genome Med 1:88. 2009
  2. pmc Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences
    Adam Amos-Binks
    School of Computer Science, Carleton University, Ottawa, ON K1S5B6, Canada
    BMC Bioinformatics 12:225. 2011
  3. pmc PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs
    Sylvain Pitre
    School of Computer Science, Carleton University, Ottawa, Canada
    BMC Bioinformatics 7:365. 2006

Collaborators

  • Sylvain Pitre
  • Adam Amos-Binks
  • Gilles Clermont
  • Ashkan Golshani
  • Andrew Schoenrock
  • James R Green
  • Catalin Patulea
  • Yuan Gui
  • Peter Raasch
  • David M Rocke
  • Yves Moreau
  • Paolo Provero
  • Michael A Langston
  • Mikael Benson
  • Jesper Tegner
  • Devdatt Dubhashi
  • Bruce J Aronow
  • Dana R Marshall
  • Charles Auffray
  • Daniel Dalevi
  • Jim Cheetham
  • Mathew Jessulat
  • Albert Chan
  • Marinella Gebbia
  • Xuemei Luo
  • Alex Duong
  • Andrew Emili
  • Jack Greenblatt
  • Nevan Krogan

Detail Information

Publications3

  1. pmc Bridging the gap between systems biology and medicine
    Gilles Clermont
    Department of Critical Care Medicine and CRISMA laboratory, University of Pittsburgh School of Medicine, Scaife 602, 3550 Terrace, Pittsburgh, PA 15261, USA
    Genome Med 1:88. 2009
    ....
  2. pmc Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences
    Adam Amos-Binks
    School of Computer Science, Carleton University, Ottawa, ON K1S5B6, Canada
    BMC Bioinformatics 12:225. 2011
    ..PIPE-Sites operates at high specificity and requires only the sequences of query proteins and a database of known binary interactions with no binding site data, making it applicable to binding site prediction at the proteome-scale...
  3. pmc PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs
    Sylvain Pitre
    School of Computer Science, Carleton University, Ottawa, Canada
    BMC Bioinformatics 7:365. 2006
    ..Consequently there is a growing need for the development of computational tools that are capable of effectively identifying such interactions...