Charles G Danko

Summary

Publications

  1. pmc Bioinformatic identification of novel putative photoreceptor specific cis-elements
    Charles G Danko
    Department of Pharmacology, SUNY Upstate Medical University, Syracuse, NY, USA
    BMC Bioinformatics 8:407. 2007
  2. pmc Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses
    Xin Luo
    Laboratory of Signaling and Gene Regulation, Cecil H, and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
    BMC Genomics 15:155. 2014
  3. pmc Identification of gene co-regulatory modules and associated cis-elements involved in degenerative heart disease
    Charles G Danko
    Department of Pharmacology, SUNY Upstate Medical University, Syracuse, NY, USA
    BMC Med Genomics 2:31. 2009

Collaborators

  • Xin Luo
  • Raga Krishnakumar
  • W Lee Kraus
  • Minho Chae

Detail Information

Publications3

  1. pmc Bioinformatic identification of novel putative photoreceptor specific cis-elements
    Charles G Danko
    Department of Pharmacology, SUNY Upstate Medical University, Syracuse, NY, USA
    BMC Bioinformatics 8:407. 2007
    ..Here, we use motif discovery algorithms to predict transcription factor binding sites involved in regulating the differences between murine rod and cone photoreceptor populations...
  2. pmc Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses
    Xin Luo
    Laboratory of Signaling and Gene Regulation, Cecil H, and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
    BMC Genomics 15:155. 2014
    ..A unique aspect of this work is the use of the RNA polymerase II (Pol II) inhibitor α-amanitin, which we used to define a set of RNA polymerase I and III (Pol I and Pol III) transcripts...
  3. pmc Identification of gene co-regulatory modules and associated cis-elements involved in degenerative heart disease
    Charles G Danko
    Department of Pharmacology, SUNY Upstate Medical University, Syracuse, NY, USA
    BMC Med Genomics 2:31. 2009
    ..Our analysis is a first step towards understanding transcription factor networks that are active in regulating gene expression during degenerative heart disease...