Jan Bartos

Summary

Affiliation: Institute of Experimental Botany
Country: Czech Republic

Publications

  1. pmc Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat
    Jan Bartos
    Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Sokolovska 6, Olomouc, CZ 77200, Czech Republic
    BMC Plant Biol 12:155. 2012
  2. pmc A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
    Jan Bartos
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    BMC Plant Biol 8:95. 2008
  3. doi request reprint Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis
    Jan Bartos
    Institute of Experimental Botany, Sokolovska 6, 77200, Olomouc, Czech Republic
    Theor Appl Genet 122:1133-47. 2011
  4. pmc A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS)
    Hana Simkova
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    BMC Genomics 9:237. 2008
  5. pmc Chromosome sorting in tetraploid wheat and its potential for genome analysis
    Marie Kubaláková
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    Genetics 170:823-9. 2005
  6. pmc Chromosomes in the flow to simplify genome analysis
    Jaroslav Dolezel
    Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Sokolovska 6, Olomouc, Czech Republic
    Funct Integr Genomics 12:397-416. 2012
  7. ncbi request reprint Dissection of the nuclear genome of barley by chromosome flow sorting
    Pavla Suchánková
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, 77200 Olomouc, Czech Republic
    Theor Appl Genet 113:651-9. 2006
  8. ncbi request reprint Advanced resources for plant genomics: a BAC library specific for the short arm of wheat chromosome 1B
    Jaroslav Janda
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    Plant J 47:977-86. 2006
  9. doi request reprint Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array
    David Kopecky
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, 77200, Olomouc, Czech Republic
    Theor Appl Genet 122:355-63. 2011
  10. pmc Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley
    Hana Simkova
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    BMC Genomics 9:294. 2008

Collaborators

Detail Information

Publications20

  1. pmc Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat
    Jan Bartos
    Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Sokolovska 6, Olomouc, CZ 77200, Czech Republic
    BMC Plant Biol 12:155. 2012
    ..As a result, the number of genes which are non-collinear to genomes of related species seems markedly increased in wheat...
  2. pmc A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
    Jan Bartos
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    BMC Plant Biol 8:95. 2008
    ..1RS translocation. A better knowledge of the rye genome could facilitate rye improvement and increase the efficiency of utilizing rye genes in wheat breeding...
  3. doi request reprint Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis
    Jan Bartos
    Institute of Experimental Botany, Sokolovska 6, 77200, Olomouc, Czech Republic
    Theor Appl Genet 122:1133-47. 2011
    ..The annotated DArTFest array resources could accelerate further studies and improvement of desired traits in Festuca-Lolium species...
  4. pmc A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS)
    Hana Simkova
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    BMC Genomics 9:237. 2008
    ..6% of the total rye genome. The 1RS arm is an attractive target as it carries many important genes and because it became part of the wheat gene pool as the 1BL.1RS translocation...
  5. pmc Chromosome sorting in tetraploid wheat and its potential for genome analysis
    Marie Kubaláková
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
    Genetics 170:823-9. 2005
    ..This study considerably expands the potential of flow cytogenetics for use in wheat genomics and opens the possibility of sequencing the genome of this important crop one chromosome arm at a time...
  6. pmc Chromosomes in the flow to simplify genome analysis
    Jaroslav Dolezel
    Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Sokolovska 6, Olomouc, Czech Republic
    Funct Integr Genomics 12:397-416. 2012
    ..This review explains the principles of flow cytometric chromosome analysis and sorting (flow cytogenetics), discusses the major uses of this technology in genome analysis, and outlines future directions...
  7. ncbi request reprint Dissection of the nuclear genome of barley by chromosome flow sorting
    Pavla Suchánková
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, 77200 Olomouc, Czech Republic
    Theor Appl Genet 113:651-9. 2006
    ..This advance makes the flow cytogenetics an attractive tool, which may greatly facilitate genome analysis and gene cloning in barley...
  8. ncbi request reprint Advanced resources for plant genomics: a BAC library specific for the short arm of wheat chromosome 1B
    Jaroslav Janda
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    Plant J 47:977-86. 2006
    ....
  9. doi request reprint Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array
    David Kopecky
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, 77200, Olomouc, Czech Republic
    Theor Appl Genet 122:355-63. 2011
    ..While all bulks were suitable for identification of hybrids, only bulks of few plants have been found to reveal the rare markers...
  10. pmc Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley
    Hana Simkova
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    BMC Genomics 9:294. 2008
    ..Yet, many genomic applications such as development of genetic maps or physical mapping do not require large DNA fragments. In such cases time-consuming de novo sorting can be minimized by utilizing whole-genome amplification...
  11. pmc Development and mapping of DArT markers within the Festuca - Lolium complex
    David Kopecky
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200, Olomouc, Czech Republic
    BMC Genomics 10:473. 2009
    ..pratensis, F. arundinacea, F. glaucescens, L. perenne and L. multiflorum...
  12. ncbi request reprint Construction of a subgenomic BAC library specific for chromosomes 1D, 4D and 6D of hexaploid wheat
    Jaroslav Janda
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, 77200 Olomouc, Czech Republic
    Theor Appl Genet 109:1337-45. 2004
    ..Their availability should facilitate the analysis of wheat genome structure and evolution, development of cytogenetic maps, construction of local physical maps and map-based cloning of agronomically important genes...
  13. pmc BAC libraries from wheat chromosome 7D: efficient tool for positional cloning of aphid resistance genes
    Hana Simkova
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 772 00 Olomouc, Czech Republic
    J Biomed Biotechnol 2011:302543. 2011
    ..The small number of clones combined with high coverage made the screening highly efficient and cost effective...
  14. ncbi request reprint Creation of a BAC resource to study the structure and evolution of the banana (Musa balbisiana) genome
    Jan Safar
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    Genome 47:1182-91. 2004
    ..The PKW BAC library represents a publicly available tool, and is currently used to reveal the integration and activation mechanisms of BSV sequences and to study banana genome structure and evolution...
  15. ncbi request reprint Dissecting large and complex genomes: flow sorting and BAC cloning of individual chromosomes from bread wheat
    Jan Safar
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200 Olomouc, Czech Republic
    Plant J 39:960-8. 2004
    ..This report on the successful cloning of flow-sorted chromosomes into BACs marks the integration of flow cytogenetics and genomics and represents a great leap forward in genetics and genomic analysis...
  16. ncbi request reprint Chromosome-based genomics in the cereals
    Jaroslav Dolezel
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, CZ 77200, Olomouc, Czech Republic
    Chromosome Res 15:51-66. 2007
    ....
  17. ncbi request reprint Plant DNA flow cytometry and estimation of nuclear genome size
    Jaroslav Dolezel
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolovska 6, Olomouc, CZ 77200, Czech Republic
    Ann Bot 95:99-110. 2005
    ..While the former applications are relatively straightforward, estimation of absolute DNA amount requires special attention to possible errors in sample preparation and analysis...
  18. ncbi request reprint Flow cytogenetics and plant genome mapping
    Jaroslav Dolezel
    Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolorakrá 6, Olomouc, CZ 77200, Czech Republic
    Chromosome Res 12:77-91. 2004
    ..This paper provides a comprehensive review of the methodology and application of flow cytogenetics, and assesses its potential for plant genome analysis...
  19. ncbi request reprint Comparison of the TUNEL, lamin B and annexin V methods for the detection of apoptosis by flow cytometry
    Dana Kylarova
    Department of Histology and Embryology, Faculty of Medicine, Palacky University, Olomouc, Czech Republic
    Acta Histochem 104:367-70. 2002
    ..It appeared that both TUNEL and annexin V methods are sensitive and specific and produced similar data in all measurements. The immunocytochemical detection of lamin B was less reliable than the other methods...
  20. ncbi request reprint MK17, a specific marker closely linked to the gynoecium suppression region on the Y chromosome in Silene latifolia
    Roman Hobza
    Laboratory of Plant Developmental Genetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, Kralovopolska Street 135, 61265 Brno, Czech Republic
    Theor Appl Genet 113:280-7. 2006
    ..Hence MK17 represents a valuable marker to isolate genes controlling the gynoecium development suppression on the Y chromosome of S. latifolia...