Li Yu

Summary

Country: China

Publications

  1. doi Phylogenetic utility of nuclear introns in interfamilial relationships of Caniformia (order Carnivora)
    Li Yu
    Laboratory for Conservation and Utilization of Bio Resources and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming 650091, China
    Syst Biol 60:175-87. 2011
  2. ncbi [Adverse effects of PAD and VAD regimens in multiple myeloma patients]
    Yu Zhao
    Department of Heamatology, Chinese PLA General Hospital, Beijing 100853, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 18:1027-30. 2010
  3. pmc Phylogenetic relationships among the colobine monkeys revisited: new insights from analyses of complete mt genomes and 44 nuclear non-coding markers
    Xiao Ping Wang
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, Yunnan, China
    PLoS ONE 7:e36274. 2012
  4. pmc Phylogenomic reconstruction of lactic acid bacteria: an update
    Zhi Gang Zhang
    State Key Laboratory of Genetic Resources and Evolution, Laboratory of Evolutionary and Functional Genomics, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, PR China
    BMC Evol Biol 11:1. 2011
  5. pmc On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, 650091, PR, China
    BMC Evol Biol 11:92. 2011
  6. pmc Evidence for positive selection on the leptin gene in Cetacea and Pinnipedia
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, China
    PLoS ONE 6:e26579. 2011
  7. doi Mitogenomic analysis of Chinese snub-nosed monkeys: Evidence of positive selection in NADH dehydrogenase genes in high-altitude adaptation
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, PR, China
    Mitochondrion 11:497-503. 2011
  8. pmc Analysis of complete mitochondrial genome sequences increases phylogenetic resolution of bears (Ursidae), a mammalian family that experienced rapid speciation
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming 650091, China
    BMC Evol Biol 7:198. 2007
  9. ncbi Characterization of TRPC2, an essential genetic component of VNS chemoreception, provides insights into the evolution of pheromonal olfaction in secondary-adapted marine mammals
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, People s Republic of China
    Mol Biol Evol 27:1467-77. 2010
  10. ncbi [Phylogenomics--an attractive avenue to reconstruct "tree of life"]
    Li Yu
    The Department of Medical Genetics, Peking University Health Science Center, Beijing 100083, China
    Yi Chuan 28:1445-50. 2006

Collaborators

Detail Information

Publications47

  1. doi Phylogenetic utility of nuclear introns in interfamilial relationships of Caniformia (order Carnivora)
    Li Yu
    Laboratory for Conservation and Utilization of Bio Resources and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming 650091, China
    Syst Biol 60:175-87. 2011
    ..Finally, the powers and pitfalls of phylogenetics using nuclear introns as markers are discussed in the context of Caniformia phylogeny...
  2. ncbi [Adverse effects of PAD and VAD regimens in multiple myeloma patients]
    Yu Zhao
    Department of Heamatology, Chinese PLA General Hospital, Beijing 100853, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 18:1027-30. 2010
    ..It is concluded that compared with conventional VAD chemotherapy, PAD may improve therapeutic effect, but it may bring more severe toxicities to the patients with multiple myeloma...
  3. pmc Phylogenetic relationships among the colobine monkeys revisited: new insights from analyses of complete mt genomes and 44 nuclear non-coding markers
    Xiao Ping Wang
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, Yunnan, China
    PLoS ONE 7:e36274. 2012
    ....
  4. pmc Phylogenomic reconstruction of lactic acid bacteria: an update
    Zhi Gang Zhang
    State Key Laboratory of Genetic Resources and Evolution, Laboratory of Evolutionary and Functional Genomics, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, PR China
    BMC Evol Biol 11:1. 2011
    ..However, the phylogenetic relationships among LAB species remain under intensive debate owing to disagreements among different data sets...
  5. pmc On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, 650091, PR, China
    BMC Evol Biol 11:92. 2011
    ....
  6. pmc Evidence for positive selection on the leptin gene in Cetacea and Pinnipedia
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, China
    PLoS ONE 6:e26579. 2011
    ....
  7. doi Mitogenomic analysis of Chinese snub-nosed monkeys: Evidence of positive selection in NADH dehydrogenase genes in high-altitude adaptation
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, PR, China
    Mitochondrion 11:497-503. 2011
    ....
  8. pmc Analysis of complete mitochondrial genome sequences increases phylogenetic resolution of bears (Ursidae), a mammalian family that experienced rapid speciation
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming 650091, China
    BMC Evol Biol 7:198. 2007
    ....
  9. ncbi Characterization of TRPC2, an essential genetic component of VNS chemoreception, provides insights into the evolution of pheromonal olfaction in secondary-adapted marine mammals
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, People s Republic of China
    Mol Biol Evol 27:1467-77. 2010
    ..Our study makes a useful contribution to the current understanding of the evolution of pheromone perception of mammals in response to selective pressures from an aquatic environment...
  10. ncbi [Phylogenomics--an attractive avenue to reconstruct "tree of life"]
    Li Yu
    The Department of Medical Genetics, Peking University Health Science Center, Beijing 100083, China
    Yi Chuan 28:1445-50. 2006
    ..In the review, the conception and analytic method of phylogenomics are summarized. The potential problems are also suggested...
  11. doi New insights into the evolution of intronic sequences of the beta-fibrinogen gene and their application in reconstructing mustelid phylogeny
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, China
    Zoolog Sci 25:662-72. 2008
    ..Additional independent genetic markers are still in need to resolve the trichotomy among Mephitinae and the other two carnivoran clades, Ailuridae and Procyonidae/non-mephitine Mustelidae...
  12. ncbi Phylogenetic relationships within mammalian order Carnivora indicated by sequences of two nuclear DNA genes
    Li Yu
    Laboratory of Molecular Biology of Domestic Animals, and Cellular and Molecular Evolution, Kunming Institute of Zoology, Kunming 650223, China
    Mol Phylogenet Evol 33:694-705. 2004
    ..Therefore, there is a need to find additional genetic markers with more rapid mutation rates that would be diagnostic at deciphering relatively recent relationships within the Carnivora...
  13. ncbi Phylogeny of the caniform carnivora: evidence from multiple genes
    Li Yu
    Laboratory of Molecular Biology of Domestic Animals, and Cellular and Molecular Evolution, Kunming Institute of Zoology, 650223, Kunming, China
    Genetica 127:65-79. 2006
    ..The potential utilities of different genes in the context of caniform phylogeny were also evaluated, with special attention to the previously unexplored beta-fibrinogen intron 4 and 7 genes...
  14. doi Adaptive evolution of digestive RNASE1 genes in leaf-eating monkeys revisited: new insights from ten additional colobines
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, China
    Mol Biol Evol 27:121-31. 2010
    ....
  15. doi Incorporating indels as phylogenetic characters: impact for interfamilial relationships within Arctoidea (Mammalia: Carnivora)
    Peng Tao Luan
    Laboratory for Conservation and Utilization of Bio Resources and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming 650091, China
    Mol Phylogenet Evol 66:748-56. 2013
    ..This is the first report of the impact of different indel coding schemes on phylogenetic reconstruction at the family level in Carnivora, which indicates that indels should be taken into account in the future phylogenetic analyses...
  16. ncbi Phylogenetic studies of pantherine cats (Felidae) based on multiple genes, with novel application of nuclear beta-fibrinogen intron 7 to carnivores
    Li Yu
    Laboratory of Cellular and Molecular Evolution, and Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China
    Mol Phylogenet Evol 35:483-95. 2005
    ..The potential utilities of nine different genes for phylogenetic resolution of closely related pantherine species were also evaluated, with special interest in that of the novel nuclear beta-fibrinogen intron 7...
  17. ncbi Phylogeny of the bears (Ursidae) based on nuclear and mitochondrial genes
    Li Yu
    Laboratory of Molecular Biology of Domestic Animals and Cellular and Molecular Evolution, Kunming Institute of Zoology, Kunming, China
    Mol Phylogenet Evol 32:480-94. 2004
    ..As can be seen from present study, the unanimous phylogeny for this recently derived family was still not produced and additional independent genetic markers were in need...
  18. ncbi Evolutionary implications of multiple SINE insertions in an intronic region from diverse mammals
    Li Yu
    Laboratory of Molecular Biology of Domestic Animals, and Cellular and Molecular Evolution, Kunming Institute of Zoology, Kunming, 650223, China
    Mamm Genome 16:651-60. 2005
    ..Implications for SINE sequence evolution upon and following integration, as well as the fascinating interactions between retroposons and the host genomes are discussed...
  19. ncbi [Intra-individual allele heterozygotes in phylogenetic analysis]
    Peng Tao Luan
    Laboratory of Conservation and Utilization of Bio resource, Yunnan University, Kunming, China
    Yi Chuan 31:875-81. 2009
    ..How to incorporate IIAHs into phylogenetic framework has been a focus in current studies. In this review, the conception, isolation, and analytic methods of IIAHs in phylogeny were summarized...
  20. ncbi The unusual adaptive expansion of pancreatic ribonuclease gene in carnivora
    Li Yu
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, China
    Mol Biol Evol 23:2326-35. 2006
    ....
  21. ncbi Evolutionary and functional novelty of pancreatic ribonuclease: a study of Musteloidea (order Carnivora)
    Jiang Liu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming 650091, PR China
    Sci Rep 4:5070. 2014
    ..In sum, the present work demonstrated a far more complex and intriguing evolutionary pattern and functional diversity of mammalian ribonuclease than previously thought. ..
  22. pmc New insights into the evolution of subtilisin-like serine protease genes in Pezizomycotina
    Juan Li
    Laboratory for Conservation and Utilization of Bio Resources, and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, PR China
    BMC Evol Biol 10:68. 2010
    ..Here we also conduct positive selection analysis on the subtilisin-like serine protease genes from nematode-trapping fungi...
  23. pmc Molecular evolution of the deuterolysin (M35) family genes in Coccidioides
    Juan Li
    Laboratory for Conservation and Utilization of Bio Resources, Yunnan University, Kunming, People s Republic of China
    PLoS ONE 7:e31536. 2012
    ..g., recent pathogenesis acquisition. Our study adds to the expanding view of M35 family gene evolution and functions as well as establishes a theoretical foundation for future experimental investigations...
  24. pmc Reticulate evolution: frequent introgressive hybridization among Chinese hares (genus lepus) revealed by analyses of multiple mitochondrial and nuclear DNA loci
    Jiang Liu
    Laboratory for Conservation and Utilization of Bio resource and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, PR, China
    BMC Evol Biol 11:223. 2011
    ....
  25. ncbi ["Long-branch Attraction" artifact in phylogenetic reconstruction]
    Yi Wei Li
    Laboratory of Conservation and Utilization of Bio resource, Yunnan University, Kunming 650091, China
    Yi Chuan 29:659-67. 2007
    ..In this review, the conception and analytic method as well as the avoidance strategy of LBA were summarized. In addition, several typical examples were provided. The approach to avoid and resolve LBA artifact has been discussed...
  26. ncbi [A prospective multicenter clinical control trial on treatment of refractory nephrotic syndrome with mycophenolate mofetil in children]
    Zhu Wen Yi
    Department of Pediatrics, Second Xiangya Hospital, Central South University, Changsha 410011, China
    Zhongguo Dang Dai Er Ke Za Zhi 10:575-8. 2008
    ..To evaluate the efficacy and safety of mycophenolate mofetil (MMF) plus prednisone on refractory nephrotic syndrome (RNS) in children...
  27. ncbi [HOXA9 is direct target of miR-196a]
    Li Ping Dou
    Department of Hematology, Chinese PLA Genearal Hospital, Beijing 100853, China
    Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi 27:166-9. 2011
    ..To analyze the possible epigenetic regulation mechanism of HOXA9 gene expression and find the possible microRNA regulating HOXA9 gene expression...
  28. ncbi The extra-long artery-pedicled back fascia skin flap for treatment of cervical contractive scar
    Jiaqi Wang
    Plastic Surgery Hospital, Chinese Academy of Medical Sciences, Beijing, China
    J Plast Reconstr Aesthet Surg 59:331-6. 2006
    ..The result indicates that the extra-long back fascia flap pedicled with descending branch of transverse cervical artery could be formed long enough to reach the opposite side of the neck and safely transferred to neck in one stage...
  29. ncbi [Effects of salvia miltiorrhiza injection on gentamicin-induced expression of nitric oxide synthase isoforms in guinea pig cochlea]
    Ai Mei Wang
    Department of Physiology, Liaoning Medical University, Jinzhou 121001, China
    Zhongguo Ying Yong Sheng Li Xue Za Zhi 27:246-9. 2011
    ..To investigate the effects of salvia miltiorrhiza injection (SM) on gentamicin (GM)-induced expression of nitric oxide synthase (NOS) isoforms in guinea pig cochlea, and to explore the protective mechanism of SM on GM-induced ototoxicity...
  30. ncbi [Analysis of the methylation in the promoter of LRP15 gene and its expression]
    Zhou min Xu
    Department of Hematology, Shanghai Corps Hospital, Chinese People Armed Police Army, Shanghai 201103, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 13:188-91. 2005
    ..Observation demonstrated that the expression of LRP15 was controlled by methylation in its promoter in K562. It is suggested that methyltransferase inhibitor and deacetylase inhibitor may be effective agents in leukemia therapy...
  31. ncbi [The methylation pattern of LRP15 gene in acute leukemia]
    Li Ping Dou
    Department of Hematology, PLA General Hospital, Beijing 100853, China
    Zhonghua Nei Ke Za Zhi 44:92-4. 2005
    ..To investigate the methylation status of LRP15 gene in acute leukemia (AL) and its role in tumorigenesis...
  32. ncbi [Analysis of LRP15 Gene Expression Pattern and Its Expression in Leukemia Cells]
    Zhou min Xu
    Department of Hematology, Shanghai Corps Hospital, Chinese People s Armed Police Army, Shanghai 201103, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 11:583-6. 2003
    ..01), the expression of LRP15 in refractory leukemia was higher than that of de novo leukemia. The results suggest that LRP15 may play an important role in carcinogenesis, AML classification and acute leukemia prognosis...
  33. ncbi [Cloning of the full length cDNA for a novel leukemia relapse-associated candidate gene LRP15]
    Zhou min Xu
    Department of Hematology, General Hospital of PLA, Beijing 100853, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 11:22-6. 2003
    ..It is concluded that RACE is an effective method to clone novel genes and LRP15 may be a leukemia relapse-associated candidate gene playing an important role in carcinogenesis...
  34. ncbi [Determination of serotonin in rat brain microdialysate after i. p. administration of fluoxetine hydrochloride by high performance liquid chromatography]
    Yunzhen Guo
    School of Pharmacy, Shenyang Pharmaceutical University, Shenyang 110016, China
    Se Pu 25:211-3. 2007
    ..25 - 5. 0 nmol/L( r =0. 999 1). The limit of quantitation was 0. 25 nmol/L. The method is simple, accurate and can be applied to the determination of serotonin in biological specimen...
  35. ncbi [The efficacy and safety of bortezomib plus thalidomide in treatment of newly diagnosed multiple myeloma]
    Shi lun Chen
    Department of Hematology, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100020, China
    Zhonghua Nei Ke Za Zhi 50:291-4. 2011
    ..The aim of this phase II study was to determine the efficacy and safety of combined bortezomib and thalidomide (VT) regime as initial treatment for newly diagnosed multiple myeloma (MM) in China...
  36. pmc Intraperitoneal administration of gonadotropin-releasing hormone-PE40 induces castration in male rats
    Li Yu
    Department of Biochemistry, Medical College, Jinan University, Guangzhou 510632, Guangdong Province, China
    World J Gastroenterol 14:2106-9. 2008
    ..To evaluate the long-term effects of gonadotropinreleasing hormone (GnRH)-based vaccine on levels of GnRH antibody and testosterone, and vaccine-induced immunocastration on sexual behavior of male rats...
  37. ncbi The diversity of KIR gene in Chinese Northern Han population and the impact of donor KIR and patient HLA genotypes on outcome following HLA-identical sibling allogeneic hematopoietic stem cell transplantation for hematological malignancy in Chinese people
    Li Ping Dou
    Department of Hematology, PLA General Hospital of China, 28 Fuxing Road, Beijing 100853, China
    Int J Hematol 87:422-33. 2008
    ..KIR and KIR2DL1 mismatch is associated with lower aGVHD in Chinese after HLA-identical sibling hematopoietic stem cell transplantation...
  38. ncbi [Study of factors associated with subclinical chorioamnionitis in term pregnancy]
    Wen ying Zhang
    Department of Obstetrics and Gynecology, NO 306 Hospital of PLA, Beijing 100101, China
    Zhonghua Yi Xue Za Zhi 90:618-20. 2010
    ..To investigate the effects of various factors upon subclinical chorioamnionitis (SCCAS) during pregnancy and delivery...
  39. ncbi Identification of an intergenic region that is not essential for replication of goatpox virus
    Wenge Ma
    Division of Livestock Infectious Diseases, State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 427 Maduan Street, Harbin 150001, People s Republic of China
    Arch Virol 155:1337-41. 2010
    ..A comparative growth assay demonstrated the stability of the recombinant virus at the replication level. These results suggest that the intergenic region is not essential for replication of goatpox virus...
  40. ncbi [Comparative efficacy of PD and VAD regimens for multiple myeloma]
    Yu Zhao
    Department of Hematology, The Chinese PLA General Hospital, Beijing 100853, China
    Zhongguo Shi Yan Xue Ye Xue Za Zhi 18:652-4. 2010
    ..It is concluded that compared with conventional VAD chemotherapy, PD may improve CR and VGPR rate in newly diagnosed patients with multiple myeloma, meanwhile it does not bring about more and worse toxicity...
  41. doi Analysis of two VP60 capsid protein genes of rabbit hemorrhagic disease virus from viruses obtained from the same farm
    Wenge Ma
    Division of Livestock Infectious Diseases, State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 427 Maduan Street, Harbin, People s Republic of China
    Arch Virol 155:1497-501. 2010
    ..The length of the VP60 gene in the second clone was only 1,536 bp. The two clones were predicted to encode 579 and 511 amino acids, respectively...
  42. doi π-π Stacking and ferromagnetic coupling mechanism on a binuclear Cu(II) complex
    Yan Hui Chi
    Engineering Research Center of Pesticide and Medicine Intermediate Clean Production, Ministry of Education, Shandong Provincial Key Laboratory of Clean Production of Fine Chemicals, Shandong Normal University, Jinan, PR China
    Dalton Trans 40:1453-62. 2011
    ....
  43. doi Summary of Laurasiatheria (mammalia) phylogeny
    Jing Yang Hu
    Yunnan University, Kunming, China
    Dongwuxue Yanjiu 33:E65-74. 2012
    ..This review aims to outline future researches on Laurasiatheria phylogeny and adaptive evolution...
  44. ncbi [Molecular evolution of the ribonuclease A superfamily]
    Datian Lang
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming 650091, China Key Laboratory for Animal Genetic Diversity and Evolution of High Education in Yunnan Province, Yunnan University, Kunming 650091, China
    Yi Chuan 36:316-26. 2014
    ....
  45. ncbi [Summary of phylogeny in family Felidae of Carnivora]
    Jin Feng Wang
    Laboratory for Conservation and Utilization of Bio resource, Yunnan University, Kunming, China
    Yi Chuan 34:1365-78. 2012
    ..This review is expected to guide future researches of Felidae phylogeny, and to lay a theoretic foundation for the protection of this animal group...
  46. ncbi Evolutionary implications of Avian Infectious Bronchitis Virus (AIBV) analysis
    Peng Shi
    Laboratory of Cellular and Molecular Evolution, and Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China
    Cell Res 16:323-7. 2006
    ..It suggests that amino acid changes that result in overall shift of residue charge and polarity should be paid special attention to during the development of vaccines...
  47. doi Cytosolic FoxO1 is essential for the induction of autophagy and tumour suppressor activity
    Ying Zhao
    Key Laboratory of Carcinogenesis and Translational Research Ministry of Education, Department of Biochemistry and Molecular Biology, Peking University Health Science Center, Beijing 100191, China
    Nat Cell Biol 12:665-75. 2010
    ..This FoxO1-modulated cell death is associated with tumour suppressor activity in human colon tumours and a xenograft mouse model. Our finding links the anti-neoplastic activity of FoxO1 and the process of autophagy...