Man Kit Cheung

Summary

Affiliation: School of Life Sciences, The Chinese University of Hong Kong
Location: Hong Kong SAR, Hong Kong
URL: https://sites.google.com/site/simonmankitcheung/
Summary:
Research Interests:
1. Molecular Microbial Ecology
2. Molecular Systematics and Phylogenetics

Publications

  1. ncbi Molecular evidence for the Southern Hemisphere origin and deep-sea diversification of spiny lobsters (Crustacea: Decapoda: Palinuridae)
    L M Tsang
    Department of Biology, The Chinese University of Hong Kong, Shatin, Hong Kong
    Mol Phylogenet Evol 51:304-11. 2009
  2. doi Composition of heterotrophic flagellates in coastal waters of different trophic status
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    Curr Microbiol 67:351-5. 2013
  3. pmc Sputum microbiota in tuberculosis as revealed by 16S rRNA pyrosequencing
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    PLoS ONE 8:e54574. 2013
  4. pmc BSRD: a repository for bacterial small regulatory RNA
    Lei Li
    Biology Programme, School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    Nucleic Acids Res 41:D233-8. 2013
  5. pmc Draft genome sequence of Salmonella enterica serovar Typhimurium ST1660/06, a multidrug-resistant clinical strain isolated from a diarrheic patient
    Lei Li
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    J Bacteriol 194:6319-20. 2012
  6. doi Fighting outbreaks with bacterial genomics: case review and workflow proposal
    M K Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    Public Health Genomics 15:341-51. 2012
  7. pmc High-density transcriptional initiation signals underline genomic islands in bacteria
    Qianli Huang
    School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    PLoS ONE 7:e33759. 2012
  8. pmc 2011 German Escherichia coli O104:H4 outbreak: whole-genome phylogeny without alignment
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    BMC Res Notes 4:533. 2011
  9. ncbi Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing
    Man Kit Cheung
    Department of Biology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    ISME J 4:1053-9. 2010
  10. pmc Rapid genotyping by low-coverage resequencing to construct genetic linkage maps of fungi: a case study in Lentinula edodes
    Chun Hang Au
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    BMC Res Notes 6:307. 2013

Collaborators

Detail Information

Publications11

  1. ncbi Molecular evidence for the Southern Hemisphere origin and deep-sea diversification of spiny lobsters (Crustacea: Decapoda: Palinuridae)
    L M Tsang
    Department of Biology, The Chinese University of Hong Kong, Shatin, Hong Kong
    Mol Phylogenet Evol 51:304-11. 2009
    ..We also found that the previously proposed subgenera Sagmariasus and Nupalirus are genetically highly diverged, and both warrant a generic status...
  2. doi Composition of heterotrophic flagellates in coastal waters of different trophic status
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    Curr Microbiol 67:351-5. 2013
    ..Our study provides insights into the ecological importance of different HF groups in eutrophic coastal ecosystems. ..
  3. pmc Sputum microbiota in tuberculosis as revealed by 16S rRNA pyrosequencing
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    PLoS ONE 8:e54574. 2013
    ..Recent studies have revealed associations of some diseases with an imbalance in the microbial community. Characterization of the TB microbiota could allow a better understanding of the disease...
  4. pmc BSRD: a repository for bacterial small regulatory RNA
    Lei Li
    Biology Programme, School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    Nucleic Acids Res 41:D233-8. 2013
    ..We have built and implemented in BSRD a novel RNA-Seq analysis platform, sRNADeep, to characterize sRNAs in large-scale transcriptome sequencing projects. We will update BSRD regularly...
  5. pmc Draft genome sequence of Salmonella enterica serovar Typhimurium ST1660/06, a multidrug-resistant clinical strain isolated from a diarrheic patient
    Lei Li
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    J Bacteriol 194:6319-20. 2012
    ..Typhimurium multidrug-resistant strain ST1660/06. Comparative genomic analysis unveiled three strain-specific genomic islands that potentially confer the multidrug resistance and virulence of the strain...
  6. doi Fighting outbreaks with bacterial genomics: case review and workflow proposal
    M K Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    Public Health Genomics 15:341-51. 2012
    ..Whilst the approach has become more affordable and accessible to research and clinical laboratories, a system for adequate and efficient analyses of genome data in the context of bacterial outbreak investigations is missing...
  7. pmc High-density transcriptional initiation signals underline genomic islands in bacteria
    Qianli Huang
    School of Life Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China
    PLoS ONE 7:e33759. 2012
    ..The heterogeneity of cumulative TSPs profiles may not only be a better identity for "alien" regions, but also provide hints to the special evolutionary course and transcriptional regulation of GI regions...
  8. pmc 2011 German Escherichia coli O104:H4 outbreak: whole-genome phylogeny without alignment
    Man Kit Cheung
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    BMC Res Notes 4:533. 2011
    ..abstract:..
  9. ncbi Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing
    Man Kit Cheung
    Department of Biology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
    ISME J 4:1053-9. 2010
    ..Our study represents one of the first and most comprehensive examinations of marine picoeukaryotic diversity using the 454 sequencing-by-synthesis technology...
  10. pmc Rapid genotyping by low-coverage resequencing to construct genetic linkage maps of fungi: a case study in Lentinula edodes
    Chun Hang Au
    School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
    BMC Res Notes 6:307. 2013
    ..The advent of next-generation sequencing technologies has facilitated progeny genotyping and genetic linkage map construction in the major grains. However, the applicability of the approach remains untested in the fungal system...