Research Topics
| Lianjie WangSummaryAffiliation: Shanghai Jiaotong University Country: China Publications
| Collaborators
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Detail Information
Publications
Information theory-based algorithm for in silico prediction of PCR products with whole genomic sequences as templatesYoufang Cao
School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
BMC Bioinformatics 6:190. 2005..A new algorithm for assessing similarity between primer and template has been developed based on the hypothesis that annealing of primer to template is an information transfer process...
Whole-body systems approaches for gut microbiota-targeted, preventive healthcareLiping Zhao
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai Center for Systems Biomedicine, Shanghai 200240, China
J Biotechnol 149:183-90. 2010....- Structural differentiation of bacterial communities in indole-degrading bioreactors under denitrifying and sulfate-reducing conditionsXuan Hong
Key Laboratory of MOE for Microbial Metabolism and School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
Res Microbiol 161:687-93. 2010..This study is the first detailed analysis of an anaerobic indole-degrading community... - A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysisXiaojun Zhang
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Dongchuan RD 800, Shanghai 200240, China
Appl Microbiol Biotechnol 91:425-34. 2011.... - Versatile aromatic compound-degrading capacity and microdiversity of Thauera strains isolated from a coking wastewater treatment bioreactorYuejian Mao
Key Laboratory of Microbial Metabolism, Ministry of Education, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
J Ind Microbiol Biotechnol 37:927-34. 2010..The capacity of the Thauera strains to degrade a wide spectrum of aromatic compounds suggests their potential in bioremediation applications targeting aromatic pollutant-containing wastewater... - Structural shifts of gut microbiota as surrogate endpoints for monitoring host health changes induced by carcinogen exposureHua Wei
Ministry of Education Key Laboratory of Systems Biomedicine, Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China
FEMS Microbiol Ecol 73:577-86. 2010..Dynamic analysis of gut microbiota may become a noninvasive strategy for monitoring host health changes induced by carcinogen exposure... - Development of group-specific PCR-DGGE fingerprinting for monitoring structural changes of Thauera spp. in an industrial wastewater treatment plant responding to operational perturbationsYuejian Mao
Key Laboratory of Microbial Metabolism, Ministry of Education, College of Life Science and Biotechnology, Shanghai Jiaotong University, Dongchuan Road 800, Shanghai 200240, China
J Microbiol Methods 75:231-6. 2008..This group-specific PCR DGGE fingerprinting technology has the potential to be a profiling tool for monitoring structural shifts of Thauera spp. in industrial WWTPs... - Development of a fluorophore-ribosomal DNA restriction typing method for monitoring structural shifts of microbial communitiesTingting Wang
Key Laboratory of Ministry of Education for Microbial Metabolism, School of Life Science and Biotechnology, Shanghai Jiao Tong University, China
Arch Microbiol 193:341-50. 2011..This study provides a labor and cost-saving new method for monitoring structural shifts of microbial communities... 
[Specificity comparison of three Feacalibacterium prausnitzii-specific PCR primer pairs]Jie Feng
Key Laboratory of Microbial Metabolism, Ministry of Education, College of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
Wei Sheng Wu Xue Bao 51:819-27. 2011....- [Diversity and quantification analysis of functional genes in a lab scale denitrifying quinoline-degrading bioreactor]Xi Xia
Key Laboratory of Microbial Metabolism, Ministry of Education, School of Life Science and Biotechnology, Shanghai Jiaotong University, Shanghai 200240, China
Wei Sheng Wu Xue Bao 50:1613-8. 2010.... - Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in miceChenhong Zhang
Laboratory of Molecular Microbial Ecology and Ecogenomics, Department of Biological Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, PR China
ISME J 4:232-41. 2010..Thus, diet has a dominating role in shaping gut microbiota and changes of some key populations may transform the gut microbiota of Wt animals into a pathogen-like entity relevant to development of MS, despite a complete host genome... - Molecular diversity of Bacteroides spp. in human fecal microbiota as determined by group-specific 16S rRNA gene clone library analysisMin Li
Laboratory of Molecular Microbial Ecology and Ecogenomics, College of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
Syst Appl Microbiol 32:193-200. 2009..in this family cohort. The comprehensive observation of molecular diversity of Bacteroides spp. provides new insights into potential contributions of various species in this group to human health and disease... - Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteersTingting Wang
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
ISME J 6:320-9. 2012..01). Reduction of butyrate producers and increase of opportunistic pathogens may constitute a major structural imbalance of gut microbiota in CRC patients... - [Comparison of microbial community structure of quinoline and indole acclimated denitrifying bioreactor]Xuan Hong
Key Laboratory of Microbial Metabolism, Ministry of Education, School of Life Science and Biotechnology, Shanghai Jiaotong University, Shanghai 200240, China
Wei Sheng Wu Xue Bao 48:503-7. 2008..We compared the microbial communities of two denitrifying bioreactors acclimated by quinoline and indole under identical condition... - Functional robustness and gene pools of a wastewater nitrification reactor: comparison of dispersed and intact biofilms when stressed by low oxygen and low pHYuejian Mao
Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Aas, Norway
FEMS Microbiol Ecol 66:167-80. 2008..The contrasting performance of DB and IB suggests that the biofilm structure, with anoxic/micro-oxic zones, helps to stabilize functions during anoxic spells and low pH... - Gut microbiota: a potential new territory for drug targetingWei Jia
School of Pharmacy and at the Institute for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai 200240, People s Republic of China
Nat Rev Drug Discov 7:123-9. 2008..In this article, we describe the therapeutic rationale and potential for targeting the gut microbiota, and discuss strategies and systems-oriented technologies for achieving this goal... - Metabolic regulatory network alterations in response to acute cold stress and ginsenoside interventionXiaoyan Wang
School of Pharmacy, Shanghai Jiao Tong University, Shanghai, 200240, People s Republic of China
J Proteome Res 6:3449-55. 2007.... - Microdiversity of phenol hydroxylase genes among phenol-degrading isolates of Alcaligenes sp. from an activated sludge systemXueli Zhang
Laboratory of Molecular Microbial Ecology and Ecogenomics, College of Life Science and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
FEMS Microbiol Lett 237:369-75. 2004..Our work suggests that there is no correlation between the phylogenetic groupings of phenol-degrading bacteria and their LmPH genotypes possibly due to extensive horizontal gene transfer of this functional gene... - Inter-species transplantation of gut microbiota from human to pigsXiaoyan Pang
Department of Bioscience and Biotechnology, College of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
ISME J 1:156-62. 2007..This HFA model provides a significantly improved system for research on gut ecology in human metabolism, nutrition and drug discovery... - Structural shifts of mucosa-associated lactobacilli and Clostridium leptum subgroup in patients with ulcerative colitisMeiling Zhang
Laboratory of Molecular Microbial Ecology and Ecogenomics, Shanghai Center for Systems Biomedicine, College of Life Science and Biotechnology, Shanghai Jiao Tong University, 200240 Shanghai, China
J Clin Microbiol 45:496-500. 2007..Localized dysbiosis of the mucosa-associated intestinal microflora, especially for lactobacilli and the Clostridium leptum subgroup, may be closely related to UC... - Symbiotic gut microbes modulate human metabolic phenotypesMin Li
Ministry of Education Key Laboratory of Systems Biomedicine, Shanghai Center for Systems Biomedicine at Shanghai Jiao Tong University, Shanghai 200240, China
Proc Natl Acad Sci U S A 105:2117-22. 2008.... - ERIC-PCR fingerprinting-based community DNA hybridization to pinpoint genome-specific fragments as molecular markers to identify and track populations common to healthy human gutsGuifang Wei
Laboratory of Molecular Microbial Ecology and Ecogenomics, College of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
J Microbiol Methods 59:91-108. 2004.... - Optimized sequence retrieval from single bands of temperature gradient gel electrophoresis profiles of the amplified 16S rDNA fragments from an activated sludge systemXueli Zhang
Laboratory of Molecular Microbial Ecology and Ecogenomics, College of Life Science and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
J Microbiol Methods 60:1-11. 2005..8% and 6.2%, respectively. Our work suggests that prior to constructing a clone library to retrieve the actual sequence diversity of a single DGE band, it is advisable to minimize ssDNA contamination to a nondetectable level... - Molecular profiling of Bacteroides spp. in human feces by PCR-temperature gradient gel electrophoresisXiaoyan Pang
Laboratory of Molecular Microbial Ecology and Ecogenomics, Department of Bioscience and Biotechnology, College of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
J Microbiol Methods 61:413-7. 2005..This work provides a rapid and effective technique for analyzing the species composition of Bacteroides in human gut... - Molecular profiling of the Clostridium leptum subgroup in human fecal microflora by PCR-denaturing gradient gel electrophoresis and clone library analysisJian Shen
Laboratory of Molecular Microbial Ecology and Ecogenomics, College of Life Science and Biotechnology, Shanghai Jiaotong University, Shanghai 200240, China
Appl Environ Microbiol 72:5232-8. 2006..Our results suggest that DGGE combined with clone library analysis is an effective technique for monitoring and analyzing the composition of this important population in the human gut flora... - Metabonomic study of aristolochic acid-induced nephrotoxicity in ratsMinjun Chen
School of Pharmacy, Shanghai Jiao Tong University, Shanghai 200030, China
J Proteome Res 5:995-1002. 2006.... - [Type III secretion system in Se9R can recognize and secret harpin in Erwinia amylovora]Guifang Wei
School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
Wei Sheng Wu Xue Bao 42:465-70. 2002..These results suggest the type III secretion machine in Se9R can recognize secretion singal in the gene of harpin in Erwinia amylovora and secret it as a biologically native form...