Ping An He

Summary

Country: China

Publications

  1. ncbi Characteristic sequences for DNA primary sequence
    Ping An He
    Department of Applied Mathematics and College of Advanced Science and Technology, Dalian University of Technology, Dalian 116024, PR China
    J Chem Inf Comput Sci 42:1080-5. 2002
  2. pmc Identification and characteristics of microRNAs from Bombyx mori
    Ping An He
    Institute of Biochemistry, Zhejiang Sci Tech University, Hangzhou 310018, PR China
    BMC Genomics 9:248. 2008
  3. ncbi Oligonucleotide profiling for discriminating bacteria in bacterial communities
    Ping An He
    College of Science, Zhejiang Sci Tech University, Hangzhou, PR China
    Comb Chem High Throughput Screen 10:247-55. 2007
  4. ncbi The sieve ratio for characterization and similarity analysis of DNA sequences
    Ping An He
    T life Research Center, Fudan University, Shanghai 200433, PR China
    Comb Chem High Throughput Screen 8:449-53. 2005
  5. ncbi Expression of open reading frames in silkworm pupal cDNA library
    Yao Zhou Zhang
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, China
    Appl Biochem Biotechnol 136:327-43. 2007
  6. doi The graphical representation of protein sequences based on the physicochemical properties and its applications
    Ping An He
    Department of Mathematics, College of Science, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 31:2136-42. 2010
  7. doi Similarity/dissimilarity studies of protein sequences based on a new 2D graphical representation
    Yu Hua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 31:1045-52. 2010
  8. doi Analysis of similarity/dissimilarity of DNA sequences based on a class of 2D graphical representation
    Yu Hua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 29:1632-9. 2008
  9. doi A novel descriptor of protein sequences and its application
    Yuhua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China Electronic address
    J Theor Biol 347:109-17. 2014
  10. doi A 3D graphical representation of protein sequences based on the Gray code
    Ping An He
    College of Science, Zhejiang Sci Tech University, Hangzhou 310018, PR China
    J Theor Biol 304:81-7. 2012

Detail Information

Publications12

  1. ncbi Characteristic sequences for DNA primary sequence
    Ping An He
    Department of Applied Mathematics and College of Advanced Science and Technology, Dalian University of Technology, Dalian 116024, PR China
    J Chem Inf Comput Sci 42:1080-5. 2002
    ..Similarity and dissimilarity analysis based on the characteristic sequences are given for eight exon-1 genes of beta-globin about eight species...
  2. pmc Identification and characteristics of microRNAs from Bombyx mori
    Ping An He
    Institute of Biochemistry, Zhejiang Sci Tech University, Hangzhou 310018, PR China
    BMC Genomics 9:248. 2008
    ..Of the 355 Arthropod miRNAs that have been identified, only 21 are B. mori miRNAs that were predicted computationally; of these, only let-7 has been confirmed by Northern blotting...
  3. ncbi Oligonucleotide profiling for discriminating bacteria in bacterial communities
    Ping An He
    College of Science, Zhejiang Sci Tech University, Hangzhou, PR China
    Comb Chem High Throughput Screen 10:247-55. 2007
    ..A new method to discriminate the origins of orphan DNA sequences was proposed, and the origins of 17 uncultured bacterium sequences from a bacterial community in the human gut were postulated and discussed...
  4. ncbi The sieve ratio for characterization and similarity analysis of DNA sequences
    Ping An He
    T life Research Center, Fudan University, Shanghai 200433, PR China
    Comb Chem High Throughput Screen 8:449-53. 2005
    ..Similarity and dissimilarity analysis based on condensed matrices are given for eleven exon-1 genes of beta-globins of eleven species...
  5. ncbi Expression of open reading frames in silkworm pupal cDNA library
    Yao Zhou Zhang
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, China
    Appl Biochem Biotechnol 136:327-43. 2007
    ..Finally, the composition of nucleotides in promoter region for all ESTs was surveyed. The results imply that the TTTTA box may possess some functions in regulating transcription and expression of some genes...
  6. doi The graphical representation of protein sequences based on the physicochemical properties and its applications
    Ping An He
    Department of Mathematics, College of Science, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 31:2136-42. 2010
    ..And, the examination of the similarity among sequences of the ND5 proteins of nine species shows the utility of our approach...
  7. doi Similarity/dissimilarity studies of protein sequences based on a new 2D graphical representation
    Yu Hua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 31:1045-52. 2010
    ..The results demonstrate the approach is convenient, fast, and efficient...
  8. doi Analysis of similarity/dissimilarity of DNA sequences based on a class of 2D graphical representation
    Yu Hua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    J Comput Chem 29:1632-9. 2008
    ....
  9. doi A novel descriptor of protein sequences and its application
    Yuhua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China Electronic address
    J Theor Biol 347:109-17. 2014
    ..Finally, we take the nine ND5 (NADH dehydrogenase subunit 5) proteins for example and illustrate the effectiveness of our approach. ..
  10. doi A 3D graphical representation of protein sequences based on the Gray code
    Ping An He
    College of Science, Zhejiang Sci Tech University, Hangzhou 310018, PR China
    J Theor Biol 304:81-7. 2012
    ..With the correlation and significance analysis, the comparisons of both our results and results of other graphical representation with the ClustalW's results can show the utility of our approach...
  11. pmc Complete sequence and organization of Antheraea pernyi nucleopolyhedrovirus, a dr-rich baculovirus
    Zuo Ming Nie
    Institute of Biochemistry, Zhejiang Sci Tech University, Hangzhou, PR China
    BMC Genomics 8:248. 2007
    ..However, there is no report of the Antheraea pernyi nucleopolyhedrovirus (AnpeNPV) genome...
  12. doi Analysis of similarity/dissimilarity of protein sequences
    Yu Hua Yao
    College of Life Sciences, Zhejiang Sci Tech University, Hangzhou 310018, People s Republic of China
    Proteins 73:864-71. 2008
    ..Then, we introduce and compare two numerical characterizations of protein graphs as descriptors to analyze the nine ND5 proteins. The approach is simple, convenient, and fast...