Sanwen Huang

Summary

Affiliation: Chinese Academy of Agricultural Sciences
Country: China

Publications

  1. pmc Genetic diversity and population structure of cucumber (Cucumis sativus L.)
    Jing Lv
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Sino Dutch Joint Lab of Horticultural Genomics, Opening Lab of Genetic Improvement of Agricultural Crops of Ministry of Agriculture, Beijing, China
    PLoS ONE 7:e46919. 2012
  2. doi request reprint The genome of the cucumber, Cucumis sativus L
    Sanwen Huang
    Key Laboratory of Horticultural Crops Genetic Improvement of Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
    Nat Genet 41:1275-81. 2009
  3. pmc Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
    Pablo F Cavagnaro
    Horticulture Department, University of Wisconsin, Madison, WI 53706, USA
    BMC Genomics 11:569. 2010
  4. pmc Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
    Shaogui Guo
    1National Engineering Research Center for Vegetables, Beijing 100097, China
    BMC Genomics 11:384. 2010
  5. doi request reprint Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster
    Houxiang Kang
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
    Theor Appl Genet 122:795-803. 2011
  6. doi request reprint Fine mapping of the Ph-3 gene conferring resistance to late blight (Phytophthora infestans) in tomato
    Chunzhi Zhang
    The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Zhongguancunnandajie 12, Beijing, 100081, People s Republic of China
    Theor Appl Genet 126:2643-53. 2013
  7. doi request reprint Localization of a new gene for bitterness in cucumber
    Shengping Zhang
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 10081, China
    J Hered 104:134-9. 2013
  8. pmc Genome-wide analysis of WRKY gene family in Cucumis sativus
    Jian Ling
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, 12 Zhongguancun South Street, Beijing, 100081 China
    BMC Genomics 12:471. 2011
  9. pmc An integrated genetic and cytogenetic map of the cucumber genome
    Yi Ren
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Sino Dutch Joint Lab of Horticultural Genomics, Opening Lab of Genetic Improvement of Agricultural Crops of Ministry of Agriculture, Beijing, China
    PLoS ONE 4:e5795. 2009
  10. doi request reprint The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions
    Shaogui Guo
    National Engineering Research Center for Vegetables, Beijing Academy of Agriculture and Forestry Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops North China, Beijing, China
    Nat Genet 45:51-8. 2013

Collaborators

Detail Information

Publications14

  1. pmc Genetic diversity and population structure of cucumber (Cucumis sativus L.)
    Jing Lv
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Sino Dutch Joint Lab of Horticultural Genomics, Opening Lab of Genetic Improvement of Agricultural Crops of Ministry of Agriculture, Beijing, China
    PLoS ONE 7:e46919. 2012
    ..Insight into the genetic structure of cucumber will help developing appropriate conservation strategies and provides a basis for population-level genome sequencing in cucumber...
  2. doi request reprint The genome of the cucumber, Cucumis sativus L
    Sanwen Huang
    Key Laboratory of Horticultural Crops Genetic Improvement of Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
    Nat Genet 41:1275-81. 2009
    ..We also identify 686 gene clusters related to phloem function. The cucumber genome provides a valuable resource for developing elite cultivars and for studying the evolution and function of the plant vascular system...
  3. pmc Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
    Pablo F Cavagnaro
    Horticulture Department, University of Wisconsin, Madison, WI 53706, USA
    BMC Genomics 11:569. 2010
    ..Similar analyses were performed in genomic and EST data from seven other plant species, and the results were compared with those of cucumber...
  4. pmc Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
    Shaogui Guo
    1National Engineering Research Center for Vegetables, Beijing 100097, China
    BMC Genomics 11:384. 2010
    ....
  5. doi request reprint Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster
    Houxiang Kang
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
    Theor Appl Genet 122:795-803. 2011
    ..Comparative DNA analysis of this cucumber Ccu gene region with a melon (C. melo) bacterial artificial chromosome (BAC) clone revealed a high degree of micro-synteny and conservation of the RGA tandem repeats in this region...
  6. doi request reprint Fine mapping of the Ph-3 gene conferring resistance to late blight (Phytophthora infestans) in tomato
    Chunzhi Zhang
    The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Zhongguancunnandajie 12, Beijing, 100081, People s Republic of China
    Theor Appl Genet 126:2643-53. 2013
    ..Furthermore, this RGA family was also found in the potato genome, but the number of the RGAs was higher than in tomato. ..
  7. doi request reprint Localization of a new gene for bitterness in cucumber
    Shengping Zhang
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 10081, China
    J Hered 104:134-9. 2013
    ..94 Kb with 160 predicted genes and 1528.23 Kb with 198 predicted genes, respectively. Among 160 predicted genes for bi-1, there is a terpene synthase gene named Csa008595, which was speculated as the candidate gene of bi-1...
  8. pmc Genome-wide analysis of WRKY gene family in Cucumis sativus
    Jian Ling
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, 12 Zhongguancun South Street, Beijing, 100081 China
    BMC Genomics 12:471. 2011
    ....
  9. pmc An integrated genetic and cytogenetic map of the cucumber genome
    Yi Ren
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Sino Dutch Joint Lab of Horticultural Genomics, Opening Lab of Genetic Improvement of Agricultural Crops of Ministry of Agriculture, Beijing, China
    PLoS ONE 4:e5795. 2009
    ..This map will facilitate whole genome sequencing, positional cloning, and molecular breeding in cucumber, and enable the integration of knowledge of gene and trait in cucurbits...
  10. doi request reprint The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions
    Shaogui Guo
    National Engineering Research Center for Vegetables, Beijing Academy of Agriculture and Forestry Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops North China, Beijing, China
    Nat Genet 45:51-8. 2013
    ....
  11. ncbi request reprint QTL-seq identifies an early flowering QTL located near Flowering Locus T in cucumber
    Hongfeng Lu
    Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of Ministry of Agriculture, Sino Dutch Joint Lab of Horticultural Genomics, Institute of Vegetables and Flowers, CAAS, Beijing, 100081, China
    Theor Appl Genet 127:1491-9. 2014
    ..Data presented here provide support for Csa1G651710 as a possible candidate gene for early flowering in the cucumber line Muromskij...
  12. doi request reprint The genome of the mesopolyploid crop species Brassica rapa
    Xiaowu Wang
    Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences IVF, CAAS, Beijing, China
    Nat Genet 43:1035-9. 2011
    ..The B. rapa genome sequence provides an important resource for studying the evolution of polyploid genomes and underpins the genetic improvement of Brassica oil and vegetable crops...
  13. pmc RNA-Seq improves annotation of protein-coding genes in the cucumber genome
    Zhen Li
    College of Life Sciences, Beijing Normal University, 19 Xinjiekouwai Street, Beijing, 100875, China
    BMC Genomics 12:540. 2011
    ..We applied the new pipeline to the reassembled cucumber genome and included a comparison between our predicted protein-coding gene sets and a published set...
  14. pmc Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus
    Kui Lin
    Laboratory of Computational Molecular Biology, College of Life Sciences, Beijing Normal University, Beijing, China
    PLoS Genet 10:e1004078. 2014
    ..This unambiguously demonstrated that Glomeromycota are more closely related to Mucoromycotina than to its postulated sister Dikarya. ..