Dong Dong

Summary

Affiliation: University of Toronto
Country: Canada

Publications

  1. pmc Dynamic evolution of bitter taste receptor genes in vertebrates
    Dong Dong
    School of Life Sciences, East China Normal University, Shanghai, PR China
    BMC Evol Biol 9:12. 2009
  2. pmc Evidences for increased expression variation of duplicate genes in budding yeast: from cis- to trans-regulation effects
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada
    Nucleic Acids Res 39:837-47. 2011
  3. pmc Gene expression variations are predictive for stochastic noise
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada
    Nucleic Acids Res 39:403-13. 2011
  4. doi request reprint Differential effects of chromatin regulators and transcription factors on gene regulation: a nucleosomal perspective
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada
    Bioinformatics 27:147-52. 2011
  5. pmc Preferential regulation of stably expressed genes in the human genome suggests a widespread expression buffering role of microRNAs
    Zhen Yang
    School of Life Sciences, Fudan University, Shanghai, 200433, China
    BMC Genomics 13:S14. 2012
  6. pmc CRDB: database of chemosensory receptor gene families in vertebrate
    Dong Dong
    Institute of Molecular Ecology and Evolution, iAIR, East China Normal University, Shanghai, China
    PLoS ONE 7:e31540. 2012
  7. doi request reprint Evolution of an X-linked primate-specific micro RNA cluster
    Jingjing Li
    Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada
    Mol Biol Evol 27:671-83. 2010
  8. doi request reprint Positive selection drives the evolution of bat bitter taste receptor genes
    Yingying Zhou
    School of Life Science, East China Normal University, Shanghai, People s Republic of China
    Biochem Genet 47:207-15. 2009
  9. pmc Evolution of Olfactory Receptor Genes in Primates Dominated by Birth-and-Death Process
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Ontario, Canada
    Genome Biol Evol 2009:258-64. 2009
  10. pmc Digital gene expression tag profiling of bat digits provides robust candidates contributing to wing formation
    Zhe Wang
    Institute of Molecular Ecology and Evolution, iAIR, East China Normal University, Shanghai 200062, PR China
    BMC Genomics 11:619. 2010

Collaborators

Detail Information

Publications12

  1. pmc Dynamic evolution of bitter taste receptor genes in vertebrates
    Dong Dong
    School of Life Sciences, East China Normal University, Shanghai, PR China
    BMC Evol Biol 9:12. 2009
    ..Previous studies have identified some T2R gene repertoires, and marked variation in repertoire size has been noted among species. However, the mechanisms underlying the evolution of vertebrate T2R genes remain poorly understood...
  2. pmc Evidences for increased expression variation of duplicate genes in budding yeast: from cis- to trans-regulation effects
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada
    Nucleic Acids Res 39:837-47. 2011
    ....
  3. pmc Gene expression variations are predictive for stochastic noise
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada
    Nucleic Acids Res 39:403-13. 2011
    ..g. chromatin regulation. Our work paves the way for the study of stochastic noise in other single-cell organisms...
  4. doi request reprint Differential effects of chromatin regulators and transcription factors on gene regulation: a nucleosomal perspective
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada
    Bioinformatics 27:147-52. 2011
    ..In this article we attempted to address this problem and examine the patterns of CR and TF regulation effects from the nucleosome perspective...
  5. pmc Preferential regulation of stably expressed genes in the human genome suggests a widespread expression buffering role of microRNAs
    Zhen Yang
    School of Life Sciences, Fudan University, Shanghai, 200433, China
    BMC Genomics 13:S14. 2012
    ..Evidence suggests that miRNAs can constrain the variation of their target to buffer the fluctuation of expression. However, whether this effect can act on the genome-wide expression remains controversial...
  6. pmc CRDB: database of chemosensory receptor gene families in vertebrate
    Dong Dong
    Institute of Molecular Ecology and Evolution, iAIR, East China Normal University, Shanghai, China
    PLoS ONE 7:e31540. 2012
    ..Our work can provide a rigorous platform for further study on the evolution of CR genes in vertebrates...
  7. doi request reprint Evolution of an X-linked primate-specific micro RNA cluster
    Jingjing Li
    Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada
    Mol Biol Evol 27:671-83. 2010
    ..Collectively, we argue these miRNAs might play an important role in epididymal morphogenesis and sperm maturation and in establishing primate-specific epididymal characteristics...
  8. doi request reprint Positive selection drives the evolution of bat bitter taste receptor genes
    Yingying Zhou
    School of Life Science, East China Normal University, Shanghai, People s Republic of China
    Biochem Genet 47:207-15. 2009
    ....
  9. pmc Evolution of Olfactory Receptor Genes in Primates Dominated by Birth-and-Death Process
    Dong Dong
    Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Ontario, Canada
    Genome Biol Evol 2009:258-64. 2009
    ..Differential selective constraints might play important role in the primate OR gene evolution in each primate species...
  10. pmc Digital gene expression tag profiling of bat digits provides robust candidates contributing to wing formation
    Zhe Wang
    Institute of Molecular Ecology and Evolution, iAIR, East China Normal University, Shanghai 200062, PR China
    BMC Genomics 11:619. 2010
    ....
  11. pmc DAnCER: disease-annotated chromatin epigenetics resource
    Andrei L Turinsky
    Hospital for Sick Children, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada
    Nucleic Acids Res 39:D889-94. 2011
    ..DAnCER is freely available at http://wodaklab.org/dancer/...
  12. doi request reprint Molecular cloning and evolutionary analysis of hemoglobin alpha-chain genes in bats
    Yang Liu
    School of Life Science, East China Normal University, Shanghai, People s Republic of China
    Biochem Genet 47:257-65. 2009
    ..These codons are under divergent selection in bats. These changes in Hb may have occurred in response to the physiological requirements of the species concerned, as adaptations to different lifestyles...