Yao Qing Shen

Summary

Country: Canada

Publications

  1. pmc TESTLoc: protein subcellular localization prediction from EST data
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    BMC Bioinformatics 11:563. 2010
  2. pmc 'Unite and conquer': enhanced prediction of protein subcellular localization by integrating multiple specialized tools
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    BMC Bioinformatics 8:420. 2007
  3. doi Plasticity of a key metabolic pathway in fungi
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, Montreal, QC, Canada
    Funct Integr Genomics 9:145-51. 2009
  4. pmc Diversity and dispersal of a ubiquitous protein family: acyl-CoA dehydrogenases
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    Nucleic Acids Res 37:5619-31. 2009
  5. doi EST databases and web tools for EST projects
    Yao Qing Shen
    Robert Cedergren Centre for Bioinformatics and Genomics, Departement de Biochimie, Universite de Montreal, Montreal, Quebec, Canada
    Methods Mol Biol 533:241-56. 2009

Detail Information

Publications5

  1. pmc TESTLoc: protein subcellular localization prediction from EST data
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    BMC Bioinformatics 11:563. 2010
    ....
  2. pmc 'Unite and conquer': enhanced prediction of protein subcellular localization by integrating multiple specialized tools
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    BMC Bioinformatics 8:420. 2007
    ..Knowledge of the mitochondrial proteome is relevant to understanding the role of this organelle in global cellular processes...
  3. doi Plasticity of a key metabolic pathway in fungi
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, Montreal, QC, Canada
    Funct Integr Genomics 9:145-51. 2009
    ..Finally, we infer the existence of a hybrid peroxisomal pathway in several Sordariomycetes, including Neurospora crassa. In these cases, a typically mitochondrion-located enzyme compensates for the lack of a peroxisomal one...
  4. pmc Diversity and dispersal of a ubiquitous protein family: acyl-CoA dehydrogenases
    Yao Qing Shen
    Robert Cedergren Center for Bioinformatics and Genomics, Biochemistry Department, Universite de Montreal, 2900 Edouard Montpetit, Montreal, QC, H3T 1J4, Canada
    Nucleic Acids Res 37:5619-31. 2009
    ..Through these unorthodox expansion strategies, the ACAD family is proficient in utilizing a large range of fatty acids and amino acids-strategies that could have shaped the evolutionary history of many other ancient protein families...
  5. doi EST databases and web tools for EST projects
    Yao Qing Shen
    Robert Cedergren Centre for Bioinformatics and Genomics, Departement de Biochimie, Universite de Montreal, Montreal, Quebec, Canada
    Methods Mol Biol 533:241-56. 2009
    ..We discuss these in comparison to other available technologies and tools, and explain the reasons for our choices...