Katerina Michalickova

Summary

Affiliation: Samuel Lunenfeld Research Institute
Country: Canada

Publications

  1. pmc PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine
    Ian Donaldson
    Samuel Lunenfeld Research Institute, Toronto, M5G 1X5, Canada
    BMC Bioinformatics 4:11. 2003
  2. pmc SeqHound: biological sequence and structure database as a platform for bioinformatics research
    Katerina Michalickova
    Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M5S 1A8
    BMC Bioinformatics 3:32. 2002
  3. pmc Species-specific protein sequence and fold optimizations
    Michel Dumontier
    Department of Biochemistry, University of Toronto, Toronto, Ontario, M5S 1A8, Canada
    BMC Bioinformatics 3:39. 2002
  4. ncbi request reprint Mutation profiling of mismatch repair-deficient colorectal cncers using an in silico genome scan to identify coding microsatellites
    Jane Park
    Centre for Cancer Genetics, Samuel Lunenfeld Research Institute, Mount Sinai Hospital, and Department of Laboratory Medicine University of Toronto, Toronto, Ontario, Canada M5G 1X5
    Cancer Res 62:1284-8. 2002

Collaborators

Detail Information

Publications4

  1. pmc PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine
    Ian Donaldson
    Samuel Lunenfeld Research Institute, Toronto, M5G 1X5, Canada
    BMC Bioinformatics 4:11. 2003
    ..We present an information extraction system that was designed to locate protein-protein interaction data in the literature and present these data to curators and the public for review and entry into BIND...
  2. pmc SeqHound: biological sequence and structure database as a platform for bioinformatics research
    Katerina Michalickova
    Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M5S 1A8
    BMC Bioinformatics 3:32. 2002
    ..SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platform for bioinformatics research in a locally-hosted environment...
  3. pmc Species-specific protein sequence and fold optimizations
    Michel Dumontier
    Department of Biochemistry, University of Toronto, Toronto, Ontario, M5S 1A8, Canada
    BMC Bioinformatics 3:39. 2002
    ..In the largest study of its kind, we sought to identify and exploit the amino-acid signatures that make species-specific protein adaptation possible across 100 complete genomes...
  4. ncbi request reprint Mutation profiling of mismatch repair-deficient colorectal cncers using an in silico genome scan to identify coding microsatellites
    Jane Park
    Centre for Cancer Genetics, Samuel Lunenfeld Research Institute, Mount Sinai Hospital, and Department of Laboratory Medicine University of Toronto, Toronto, Ontario, Canada M5G 1X5
    Cancer Res 62:1284-8. 2002
    ..This algorithm allows comprehensive mutation profiling of MMR-deficient cancers, an important step in understanding the pathogenesis of these neoplasms...