Research Topics
| Troy DaySummaryAffiliation: Queen's University Country: Canada Publications
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Publications
Computability, Gödel's incompleteness theorem, and an inherent limit on the predictability of evolutionTroy Day
Department of Mathematics and Statistics, Jeffery Hall, Queen s University, Kingston, Ontario, Canada
J R Soc Interface 9:624-39. 2012..The theorem is closely related to Gödel's incompleteness theorem, and to the halting problem from computability theory...
The evolutionary epidemiology of multilocus drug resistanceTroy Day
Department of Mathematics and Statistics and Department of Biology, Jeffery Hall, Queen s University, Kingston, ON, K7L 3N6, Canada
Evolution 66:1582-97. 2012....
Intralocus sexual conflict can drive the evolution of genomic imprintingTroy Day
Department of Mathematics, Queen s University, Kingston, Ontario K7L 3N6, Canada
Genetics 167:1537-46. 2004..This theory also provides a potential mechanism for the resolution of intralocus sexual conflict in sexually selected traits and a novel pathway for the evolution of sexual dimorphism...
To age or not to age--what is the question?Troy Day
Department of Mathematics, Queen s University, Kingston, Ontario K7L 3N6 Canada
Sci Aging Knowledge Environ 2004:pe10. 2004..A recent paper by Sozou and Seymour questions this prediction using a mathematical model, but it remains to be seen whether their new results stand up to more general analysis...
Evolution of parasite virulence when host responses cause diseaseTroy Day
Department of Mathematics and Statistics, Jeffery Hall, Queen s University, Kingston, Canada K7L 3N6
Proc Biol Sci 274:2685-92. 2007..Immunopathology complicates our understanding of disease evolution, but can nevertheless be readily accounted for within the framework of the trade-off hypothesis...
Predicting quarantine failure ratesTroy Day
Queen s University, Kingston, Ontario, Canada K7L 3N6
Emerg Infect Dis 10:487-8. 2004..Here a simple, exact estimate of the failure rate is derived that does not depend on disease-specific parameters. This estimate is universally applicable to all infectious diseases...
Factors affecting the evolution of bleaching resistance in coralsTroy Day
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario K7L 3N6, Canada
Am Nat 171:E72-88. 2008..These qualitative theoretical results highlight important future directions for empirical research in order to quantify the potential for coral reefs to evolve resistance to thermal stress...
A unified approach to the evolutionary consequences of genetic and nongenetic inheritanceTroy Day
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario K7L 3N6, Canada
Am Nat 178:E18-36. 2011....
A consideration of patterns of virulence arising from host-parasite coevolutionTroy Day
Department of Mathematics and Biology, Jeffery Hall, Queen s University, Kingston, Ontario K7L 3N6, Canada
Evolution 57:671-6. 2003..This contrasts with previous results and arises from our inclusion of two important factors absent from previous theory: costs of immunological up-regulation and a more suitable measure of parasite-induced mortality...
Bridging scales in the evolution of infectious disease life histories: theoryTroy Day
Department of Mathematics and Statistics, Jeffery Hall, Queen s University, Kingston, ON, K7L 3N6, Canada
Evolution 65:3448-61. 2011..In a companion paper, we illustrate the approach by applying it to data from a model system of malaria...
Applying population-genetic models in theoretical evolutionary epidemiologyTroy Day
Department of Mathematics, Jeffery Hall, Queen s University, Kingston, ON K7L 3N6, Canada
Ecol Lett 10:876-88. 2007....
A general theory for the evolutionary dynamics of virulenceTroy Day
Department of Mathematics, Queen s University, Kingston, Ontario, K7L 3N6, Canada
Am Nat 163:E40-63. 2004..It also leads to novel predictions that are not possible using the game-theoretic approach. The general theory can be used to model the evolution of other pathogen traits as well...
The evolutionary consequences of plasticity in host-pathogen interactionsPeter D Taylor
Department of Mathematics and Statistics, Queen s University, Kingston, ON, Canada K7L 3N6
Theor Popul Biol 69:323-31. 2006..We find, quite generally, that plasticity promotes the evolution of higher levels of cooperation, in this case leading to reduced levels of both virulence and clearance...
From inclusive fitness to fixation probability in homogeneous structured populationsPeter D Taylor
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario, Canada K7L 3N6
J Theor Biol 249:101-10. 2007..The results are illustrated for a model of the evolution of cooperation in a finite island population...
Perfect reciprocity is the only evolutionarily stable strategy in the continuous iterated prisoner's dilemmaJean Baptiste André
Department of Biology, Queen s University, Kingston, Ont, Canada Instituto Gulbenkian de Ciência, Oeiras, Portugal
J Theor Biol 247:11-22. 2007..e., correlated) fashion. As a corollary, the overall payoff of social interactions (i.e., the amount of cooperation) is maximized because couples of correlated partners effectively become the units of selection...
The evolutionary emergence of pandemic influenzaTroy Day
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario, Canada
Proc Biol Sci 273:2945-53. 2006..Finally, public health interventions aimed at reducing the duration of avian virus infections in humans give the greatest reduction in the probability that a pandemic strain will evolve...
Evidences of parasite evolution after vaccinationSylvain Gandon
CEFE UMR 5175, 1919 Route de Mende, F 34293 Montpellier cedex 5, France
Vaccine 26:C4-7. 2008..Our purpose here is therefore to stimulate future research into quantifying these effects...
Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseasesNicole Mideo
Department of Biology, Queen s University, Kingston, ON K7L 3N6, Canada
Trends Ecol Evol 23:511-7. 2008..Nevertheless, these models have proven very useful through their highlighting of the importance of within-host disease dynamics on pathogen evolution...
Evolution of cooperation in a finite homogeneous graphPeter D Taylor
Department of Mathematics and Statistics, Queen s University Kingston, Ontario K7L 3N6, Canada
Nature 447:469-72. 2007..For other types of population regulation our results reveal that cooperation can invade if players choose partners along relatively 'high-weight' edges...
Evolutionary epidemiology and the dynamics of adaptationSylvain Gandon
Centre d Ecologie Fonctionnelle et Evolutive, UMR 5175, 1919 Route de Mende, F 34293 Montpellier cedex 5, France
Evolution 63:826-38. 2009..As mean fitness is an easily measurable quantity in microbial systems, this analysis provides new ways to track the dynamics of adaptation in experimental evolution and coevolution studies...
Modelling malaria pathogenesisNicole Mideo
Department of Biology, Queen s University, Kingston, ON, Canada
Cell Microbiol 10:1947-55. 2008....
Epidemiological and evolutionary consequences of targeted vaccinationPaul D Williams
Department of Zoology, University of Toronto, 25 Harbord Street, Toronto, Ontario, Canada, M5S 3G5
Mol Ecol 17:485-99. 2008..They further suggest that accounting for realistic kinds of heterogeneity when contemplating targeted treatment plans and policies might provide a new tool in the design of more effective virulence management strategies...
The effect of disease life history on the evolutionary emergence of novel pathogensJean Baptiste André
Department of Biology, Queen s University, Kingston, Ontario, Canada K7L3N6
Proc Biol Sci 272:1949-56. 2005..In general, diseases that initially have a large reproductive number and/or that cause relatively long infections are the most prone to evolutionary adaptation...
Understanding and predicting strain-specific patterns of pathogenesis in the rodent malaria Plasmodium chabaudiNicole Mideo
Department of Biology, Queen s University, Kingston, Ontario K7L3N6
Am Nat 172:214-38. 2008..Our analyses highlight the importance of model selection and validation for revealing new biological insights...
On the evolution of reproductive restraint in malariaNicole Mideo
Department of Biology, Queen s University, Kingston, ON, Canada
Proc Biol Sci 275:1217-24. 2008..Further experimental work is needed to determine which of these two hypotheses provides the most likely explanation...
Next-generation tools for evolutionary invasion analysesAmy Hurford
Department of Mathematics and Statistics, Queen s University, Ontario, Canada
J R Soc Interface 7:561-71. 2010..Although focusing primarily on evolutionary invasion analysis, we provide several insights that apply to biological modelling in general...
Optimal antiviral treatment strategies and the effects of resistanceElsa Hansen
Department of Mathematics and Statistics, Queen s University, Jeffery Hall, Kingston, Ontario, Canada K7L 3N6
Proc Biol Sci 278:1082-9. 2011..Finally, we use numerical simulations to verify that the results also hold under more general conditions...
Stability in negotiation games and the emergence of cooperationPeter D Taylor
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario K7L 3N6, Canada
Proc Biol Sci 271:669-74. 2004..Mathematical analysis suggests why this might be happening, and provides a novel and robust explanation for cooperation, that negotiation can facilitate the evolution of cooperative behaviour...
Optimal control of epidemics with limited resourcesElsa Hansen
Department of Mathematics and Statistics, Queen s University, Jeffery Hall, Kingston, ON, Canada
J Math Biol 62:423-51. 2011..The results presented here also highlight a number of areas that warrant further study and emphasize that time-optimal control of the basic SIR model is still not fully understood...
When is quarantine a useful control strategy for emerging infectious diseases?Troy Day
Department of Mathematics and Statistics, Queen s University, Kingston, Ontario, Canada
Am J Epidemiol 163:479-85. 2006..When isolation is ineffective, the use of quarantine will be most beneficial when there is significant asymptomatic transmission and if the asymptomatic period is neither very long nor very short...
A theoretical investigation of the evolution and maintenance of mirror-image flowersLinley K Jesson
Department of Botany, University of Toronto, 25 Willcocks Street, Toronto, Ontario M5S 3B2, Canada
Am Nat 161:916-30. 2003....
The evolutionary consequences of vaccinationTroy Day
Vaccine 26:C1-3. 2008
On the evolution of virulence and the relationship between various measures of mortalityTroy Day
Department of Zoology, University of Toronto, 25 Harbord Street, Toronto, Ontario, Canada M5S 3G5
Proc Biol Sci 269:1317-23. 2002....
Behavioural evolution: cooperate with thy neighbour?Peter D Taylor
Nature 428:611-2. 2004
Modelling strategies for controlling SARS outbreaksAbba B Gumel
Institute of Industrial and Mathematical Sciences, University of Manitoba, Winnipeg, Manitoba R3T 2N2, Canada
Proc Biol Sci 271:2223-32. 2004..A community-wide eradication of SARS is feasible if optimal isolation is combined with a highly effective screening programme at the points of entry...
Population structure attributable to reproductive time: isolation by time and adaptation by timeAndrew P Hendry
Redpath Museum and Department of Biology, McGill University, 859 Sherbrooke St W, Montreal, Quebec H3A 2K6 Canada
Mol Ecol 14:901-16. 2005..The best evidence for IBT and ABT currently comes from salmonid fishes and flowering plants, but we expect that future work will show these processes are more widespread...
Understanding and managing pathogen evolution: a way forwardSylvain Gandon
Trends Microbiol 11:206-7; author reply 208-9. 2003
Debating sexual selection and mating strategiesTroy Day
Science 312:689-97; author reply 689-97. 2006
The shaping of senescence in the wildPaul D Williams
Department of Zoology, University of Toronto, 25 Harbord St, Toronto, Ont, Canada
Trends Ecol Evol 21:458-63. 2006..We argue that it is necessary to move beyond the simplistic classical expectation and to take a more comprehensive and precise approach to studies of senescence, both theoretically and empirically...
The evolutionary epidemiology of vaccinationSylvain Gandon
Génétique et Evolution des Maladies Infectieuses, UMR CNRS IRD 2724, IRD, 911 Avenue Agropolis, 34394 Montpellier Cedex 5, France
J R Soc Interface 4:803-17. 2007..In particular, we argue that more work should be done evaluating the nature and magnitude of parasite fitness costs associated with adaptation to vaccinated hosts...
The evolution of virulence in vector-borne and directly transmitted parasitesTroy Day
Department of Zoology, University of Toronto, 25 Harbord St, Toronto, Ontario, Canada M5S 3G5
Theor Popul Biol 62:199-213. 2002..I conclude by suggesting that an alternative explanation might lie in differences in inoculum size between these two types of transmission...
Detecting sexually antagonistic coevolution with population crossesLocke Rowe
Department of Zoology, University of Toronto, Toronto, Ontario M5S 3G5, Canada
Proc Biol Sci 270:2009-16. 2003..These results suggest a reinterpretation of several recent experiments and have important implications for developing theories of speciation when sexually antagonistic coevolution is involved...
Older males signal more reliablyStephen R Proulx
Department of Zoology, University of Toronto, 25 Harbord Street, Toronto, ON, M5S 3G5, Canada
Proc Biol Sci 269:2291-9. 2002..This provides a novel rationale for female preference for older mates; older males reveal more information in their sexual displays...
Antagonistic pleiotropy, mortality source interactions, and the evolutionary theory of senescencePaul D Williams
Department of Zoology, University of Toronto, 25 Harbord Street, Toronto, Ontario M5S 3G5, Canada
Evolution 57:1478-88. 2003..The combined effects can therefore result in the novel prediction that an increase in interactive extrinsic mortality sources can select for slower senescent deterioration early in life but more rapid deterioration late in life...
The evolution of static allometry in sexually selected traitsRussell Bonduriansky
Department of Zoology, University of Toronto, Toronto, Ontario M5S 3G5, Canada
Evolution 57:2450-8. 2003..More generally, our findings highlight the difficulty of inferring complex underlying processes from simple emergent patterns...
The evolution of sperm-allocation strategies and the degree of sperm competitionPaul D Williams
Department of Zoology, University of Toronto, 25 Harbord Street, Toronto, Ontario M5S 3G5, Canada
Evolution 59:492-9. 2005..This change in perspective leads to predictions that are qualitatively different from those of previous theory...
Escalation, retreat, and female indifference as alternative outcomes of sexually antagonistic coevolutionLocke Rowe
Department of Zoology, University of Toronto, Toronto, Ontario M5S 3G5, Canada
Am Nat 165:S5-18. 2005..Together, these results suggest that identifying the nature of genetic variation in and the strength of natural selection on female resistance should be a central goal of future studies of sexual conflict...
Detecting sexual conflict and sexually antagonistic coevolutionLocke Rowe
Department of Zoology, University of Toronto, Toronto, Ontario M5S 3G5, Canada
Philos Trans R Soc Lond B Biol Sci 361:277-85. 2006..A mix of selection and manipulative studies on these is likely the most promising route...
Sperm competition and the evolution of ejaculate compositionErin Cameron
Department of Biology, McGill University, Montreal, Quebec, Canada
Am Nat 169:E158-72. 2007..It also predicts the evolution of distinct patterns in ejaculate composition depending on the function of seminal fluid. In the discussion, we highlight a number of potential approaches for testing the theory that we develop...
The role of size-specific predation in the evolution and diversification of prey life historiesTroy Day
Department of Zoology, University of Toronto, ON, Canada
Evolution 56:877-87. 2002..Moreover, under strong coupling it is also possible for natural selection to favor an evolutionary diversification of life histories, possibly resulting in two coexisting species with divergent life-history strategies...
