Abdoulaye Banire Diallo

Summary

Country: Canada

Publications

  1. doi request reprint A whole genome study and identification of specific carcinogenic regions of the human papilloma viruses
    Abdoulaye Banire Diallo
    Departement d informatique, Universite du Quebec a Montreal, Succursale Centre Ville, Montreal, Quebec, Canada
    J Comput Biol 16:1461-73. 2009
  2. doi request reprint Ancestors 1.0: a web server for ancestral sequence reconstruction
    Abdoulaye Banire Diallo
    Department of Computer Science, Universite du Quebec a Montreal, PO Box 8888 Downtown Station, Montreal, QC H3C3P8, Canada
    Bioinformatics 26:130-1. 2010
  3. pmc Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations
    Etienne Lord
    Departement d informatique, Universite du Quebec a Montreal, Montreal, Canada
    PLoS ONE 7:e29903. 2012
  4. pmc Computational prediction of the localization of microRNAs within their pre-miRNA
    Mickael Leclercq
    School of Computer Science and McGill Centre for Bioinformatics, McGill University, Montreal, Quebec, Canada H3A2B2 and Laboratoire de bioinformatique du département informatique, Universite du Quebec a Montreal, Montreal, Quebec, Canada H2X3Y7
    Nucleic Acids Res 41:7200-11. 2013
  5. pmc Detecting genomic regions associated with a disease using variability functions and Adjusted Rand Index
    Dunarel Badescu
    Département d lnformatique, Universite du Quebec a Montreal, CP 8888, Succursale Centre Ville, Montreal Quebec, H3C 3P8, Canada
    BMC Bioinformatics 12:S9. 2011
  6. ncbi request reprint Exact and heuristic algorithms for the Indel Maximum Likelihood Problem
    Abdoulaye Banire Diallo
    McGill Centre for Bioinformatics and School of Computer Science, McGill University, Montreal, Quebec, Canada
    J Comput Biol 14:446-61. 2007
  7. doi request reprint Computational reconstruction of ancestral DNA sequences
    Mathauieu Blanchette
    McGill Centre for Bioinformatics, McGill University, Montreal, Canada
    Methods Mol Biol 422:171-84. 2008

Collaborators

Detail Information

Publications7

  1. doi request reprint A whole genome study and identification of specific carcinogenic regions of the human papilloma viruses
    Abdoulaye Banire Diallo
    Departement d informatique, Universite du Quebec a Montreal, Succursale Centre Ville, Montreal, Quebec, Canada
    J Comput Biol 16:1461-73. 2009
    ..Supplementary Material is provided (see online Supplementary Material at www.libertonline.com )...
  2. doi request reprint Ancestors 1.0: a web server for ancestral sequence reconstruction
    Abdoulaye Banire Diallo
    Department of Computer Science, Universite du Quebec a Montreal, PO Box 8888 Downtown Station, Montreal, QC H3C3P8, Canada
    Bioinformatics 26:130-1. 2010
    ..The results presented by the server include the posterior probabilities for the last two steps of the ancestral genome reconstruction and the expected error rate of each ancestral base prediction...
  3. pmc Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations
    Etienne Lord
    Departement d informatique, Universite du Quebec a Montreal, Montreal, Canada
    PLoS ONE 7:e29903. 2012
    ..The program and its source code are freely available at: <http://www.bioinfo.uqam.ca/armadillo>...
  4. pmc Computational prediction of the localization of microRNAs within their pre-miRNA
    Mickael Leclercq
    School of Computer Science and McGill Centre for Bioinformatics, McGill University, Montreal, Quebec, Canada H3A2B2 and Laboratoire de bioinformatique du département informatique, Universite du Quebec a Montreal, Montreal, Quebec, Canada H2X3Y7
    Nucleic Acids Res 41:7200-11. 2013
    ..MiRdup is open source under the GPLv3 and available at http://www.cs.mcgill.ca/∼blanchem/mirdup/. ..
  5. pmc Detecting genomic regions associated with a disease using variability functions and Adjusted Rand Index
    Dunarel Badescu
    Département d lnformatique, Universite du Quebec a Montreal, CP 8888, Succursale Centre Ville, Montreal Quebec, H3C 3P8, Canada
    BMC Bioinformatics 12:S9. 2011
    ..In the past, we have proposed a method that takes into account the prior knowledge on an external evidence (e.g., carcinogenicity or invasivity of the considered organisms) and identifies genomic regions related to a specific disease...
  6. ncbi request reprint Exact and heuristic algorithms for the Indel Maximum Likelihood Problem
    Abdoulaye Banire Diallo
    McGill Centre for Bioinformatics and School of Computer Science, McGill University, Montreal, Quebec, Canada
    J Comput Biol 14:446-61. 2007
    ..A heuristic is presented to make the method practical for large data sets, while retaining an extremely high degree of accuracy. The methods are illustrated on a 1-Mb alignment of the CFTR regions from 12 mammals...
  7. doi request reprint Computational reconstruction of ancestral DNA sequences
    Mathauieu Blanchette
    McGill Centre for Bioinformatics, McGill University, Montreal, Canada
    Methods Mol Biol 422:171-84. 2008
    ..We also describe a simulation-based procedure to assess the accuracy of the reconstructed sequences. The whole reconstruction process is illustrated using a set of mammalian sequences from the CFTR region...