Jose Cruz-Toledo

Summary

Affiliation: Carleton University
Country: Canada

Publications

  1. pmc Ontology-Based Querying with Bio2RDF's Linked Open Data
    Alison Callahan
    Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, ON, Canada
    J Biomed Semantics 4:S1. 2013
  2. pmc Aptamer Base: a collaborative knowledge base to describe aptamers and SELEX experiments
    Jose Cruz-Toledo
    Department of Biology, Carleton University, Ottawa, ON, Canada
    Database (Oxford) 2012:bas006. 2012
  3. pmc RKB: a Semantic Web knowledge base for RNA
    Jose Cruz-Toledo
    Department of Biology, Carleton University 1125 Colonel By Drive, K1S5B6, Ottawa, Canada
    J Biomed Semantics 1:S2. 2010
  4. doi Analysis of In Vitro Aptamer Selection Parameters
    Maureen McKeague
    Chemistry Department, Carleton University, 1125 Colonel By Drive, Ottawa, ON, K1S 5B6, Canada
    J Mol Evol 81:150-61. 2015

Collaborators

  • Maureen McKeague
  • Michel Dumontier
  • Alison Callahan
  • Ashley Cabecinha
  • Xueru Zhang
  • Michael Beking
  • Emily Mastronardi
  • Amanda Pach
  • Tariq Francis
  • Erin M McConnell
  • Annamaria Ruscito
  • Rocio Aranda-Rodriguez
  • Amanda Giamberardino
  • Elyse D Bernard
  • Maria C DeRosa

Detail Information

Publications4

  1. pmc Ontology-Based Querying with Bio2RDF's Linked Open Data
    Alison Callahan
    Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, ON, Canada
    J Biomed Semantics 4:S1. 2013
    ..However, querying Bio2RDF remains difficult due to the lack of uniformity in the representation of Bio2RDF datasets...
  2. pmc Aptamer Base: a collaborative knowledge base to describe aptamers and SELEX experiments
    Jose Cruz-Toledo
    Department of Biology, Carleton University, Ottawa, ON, Canada
    Database (Oxford) 2012:bas006. 2012
    ..DATABASE URL: http://aptamer.freebase.com...
  3. pmc RKB: a Semantic Web knowledge base for RNA
    Jose Cruz-Toledo
    Department of Biology, Carleton University 1125 Colonel By Drive, K1S5B6, Ottawa, Canada
    J Biomed Semantics 1:S2. 2010
    ..We show queries to the RKB using description logic reasoning, thus opening the door to question answering over independently-published RNA knowledge using Semantic Web technologies...
  4. doi Analysis of In Vitro Aptamer Selection Parameters
    Maureen McKeague
    Chemistry Department, Carleton University, 1125 Colonel By Drive, Ottawa, ON, K1S 5B6, Canada
    J Mol Evol 81:150-61. 2015
    ..Our results further emphasize the need for improved documentation and more thorough experimentation of SELEX criteria to determine their correlation with SELEX success. ..