Alejandro Caceres

Summary

Publications

  1. pmc Identification of polymorphic inversions from genotypes
    Alejandro Caceres
    Center for Research in Environmental Epidemiology, and Institut Municipal d Investigació Mèdica, Barcelona 08003, Spain
    BMC Bioinformatics 13:28. 2012
  2. pmc R-Gada: a fast and flexible pipeline for copy number analysis in association studies
    Roger Pique-Regi
    Signal and Image Processing Institute, Viterbi School of Engineering, University of Southern California, EEB 400, 3740 McClintock Ave, Los Angeles, CA 90089 2564, USA
    BMC Bioinformatics 11:380. 2010
  3. pmc MLPAstats: an R GUI package for the integrated analysis of copy number alterations using MLPA data
    Alejandro Caceres
    Center for Research in Environmental Epidemiology, Doctor Aiguader 88, Barcelona 08003, Spain
    BMC Bioinformatics 12:147. 2011
  4. pmc A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data
    Juan R Gonzalez
    Center for Research in Environmental Epidemiology, Doctor Aiguader 88, Barcelona 08003, Spain
    BMC Bioinformatics 12:166. 2011
  5. doi request reprint Multiple correspondence discriminant analysis: an application to detect stratification in copy number variation
    Alejandro Caceres
    Center for research in environmental epidemiology CREAL, Parc de Recerca Biomedica de Barcelona, 88 Doctor Aiguader, Barcelona, Spain
    Stat Med 29:3284-93. 2010
  6. pmc Accounting for uncertainty when assessing association between copy number and disease: a latent class model
    Juan R Gonzalez
    Center for research in environmental epidemiology CREAL, Barcelona, Spain
    BMC Bioinformatics 10:172. 2009

Detail Information

Publications6

  1. pmc Identification of polymorphic inversions from genotypes
    Alejandro Caceres
    Center for Research in Environmental Epidemiology, and Institut Municipal d Investigació Mèdica, Barcelona 08003, Spain
    BMC Bioinformatics 13:28. 2012
    ..Other methods that measure differences between linkage disequilibrium attempt to identify regions with inversions but unable to classify subjects accurately, an essential requirement for association studies...
  2. pmc R-Gada: a fast and flexible pipeline for copy number analysis in association studies
    Roger Pique-Regi
    Signal and Image Processing Institute, Viterbi School of Engineering, University of Southern California, EEB 400, 3740 McClintock Ave, Los Angeles, CA 90089 2564, USA
    BMC Bioinformatics 11:380. 2010
    ..CNVs have successfully provided target genome regions for some disease conditions where simple genetic variation (i.e., SNPs) has previously failed to provide a clear association...
  3. pmc MLPAstats: an R GUI package for the integrated analysis of copy number alterations using MLPA data
    Alejandro Caceres
    Center for Research in Environmental Epidemiology, Doctor Aiguader 88, Barcelona 08003, Spain
    BMC Bioinformatics 12:147. 2011
    ..A number of methods have been proposed in each step with varying levels of complexity and precision. However, there is no single framework from which the results of each method and possible combinations at each step can be assessed...
  4. pmc A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data
    Juan R Gonzalez
    Center for Research in Environmental Epidemiology, Doctor Aiguader 88, Barcelona 08003, Spain
    BMC Bioinformatics 12:166. 2011
    ....
  5. doi request reprint Multiple correspondence discriminant analysis: an application to detect stratification in copy number variation
    Alejandro Caceres
    Center for research in environmental epidemiology CREAL, Parc de Recerca Biomedica de Barcelona, 88 Doctor Aiguader, Barcelona, Spain
    Stat Med 29:3284-93. 2010
    ..On this sample, the selection of variables based on centroid ranking outperformed the most common practice of ranking variables with their correlation to the principal axes...
  6. pmc Accounting for uncertainty when assessing association between copy number and disease: a latent class model
    Juan R Gonzalez
    Center for research in environmental epidemiology CREAL, Barcelona, Spain
    BMC Bioinformatics 10:172. 2009
    ..We also indicate how to use the model to analyze continuous traits and adjust for confounding covariates...