Paulo Cg Ferreira


Affiliation: Rio de Janeiro
Country: Brazil


  1. Danilevicz M, Moharana K, Venancio T, Franco L, Cardoso S, Cardoso M, et al. Copaifera langsdorffii Novel Putative Long Non-Coding RNAs: Interspecies Conservation Analysis in Adaptive Response to Different Biomes. Noncoding RNA. 2018;4: pubmed publisher
    ..Our results indicate the potential involvement of lncRNAs in the adaptation of C. langsdorffii in two different biomes. ..
  2. Vieira L, Grativol C, Thiebaut F, Carvalho T, Hardoim P, Hemerly A, et al. PlantRNA_Sniffer: A SVM-Based Workflow to Predict Long Intergenic Non-Coding RNAs in Plants. Noncoding RNA. 2017;3: pubmed publisher
    ..and in maize (Zea mays). From the results, we also could identify differentially-expressed lincRNAs in sugarcane and maize plants submitted to pathogenic and beneficial microorganisms. ..
  3. Thiebaut F, Rojas C, Grativol C, Calixto E, Motta M, Ballesteros H, et al. Roles of Non-Coding RNA in Sugarcane-Microbe Interaction. Noncoding RNA. 2017;3: pubmed publisher
    ..Our results suggest that regulation by miR408 is important in sugarcane sensing whether microorganisms are either pathogenic or beneficial, triggering specific miRNA-mediated regulatory mechanisms accordingly. ..
  4. Thiebaut F, Rojas C, Grativol C, Motta M, Vieira T, Regulski M, et al. Genome-wide identification of microRNA and siRNA responsive to endophytic beneficial diazotrophic bacteria in maize. BMC Genomics. 2014;15:766 pubmed publisher
    ..Our findings suggest important roles for sRNA regulation in maize, and probably in other plants, during association with diazotrophic bacteria, emphasizing the up-regulation of Cu-miRNA. ..
  5. da Silva A, Grativol C, Thiebaut F, Hemerly A, Ferreira P. Computational identification and comparative analysis of miRNA precursors in three palm species. Planta. 2016;243:1265-77 pubmed publisher
    ..Our findings contribute to increase the knowledge on microRNA roles in palm biology and could help breeding programs of palm trees. ..
  6. Bertalan M, Albano R, de Pádua V, Rouws L, Rojas C, Hemerly A, et al. Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 2009;10:450 pubmed publisher
    ..It has important biotechnological features such as nitrogen fixation, plant growth promotion, sugar metabolism pathways, secretion of organic acids, synthesis of auxin and the occurrence of bacteriocins...
  7. Thiebaut F, Grativol C, Carnavale Bottino M, Rojas C, Tanurdzic M, Farinelli L, et al. Computational identification and analysis of novel sugarcane microRNAs. BMC Genomics. 2012;13:290 pubmed publisher
    ..We therefore undertook small RNA sequencing of sugarcane miRNAs in order to understand their complexity and to explore their role in sugarcane biology...
  8. Lima M, Eloy N, Pegoraro C, Sagit R, Rojas C, Bretz T, et al. Genomic evolution and complexity of the Anaphase-promoting Complex (APC) in land plants. BMC Plant Biol. 2010;10:254 pubmed publisher
  9. Brasil J, Cabral L, Eloy N, Primo L, Barroso Neto I, Grangeiro L, et al. AIP1 is a novel Agenet/Tudor domain protein from Arabidopsis that interacts with regulators of DNA replication, transcription and chromatin remodeling. BMC Plant Biol. 2015;15:270 pubmed publisher
    ..AIP1 is a novel Agenet/Tudor domain protein in plants that could act as a link between DNA replication, transcription and chromatin remodeling during flower development. ..