Dario Grattapaglia

Summary

Country: Brazil

Publications

  1. ncbi Y-chromosome STR haplotype diversity in Brazilian populations
    Dario Grattapaglia
    Heréditas Tecnologia em Análise de DNA Ltda, SHIN CA 02, Lote 19, Brasilia, DF 71505 000, Brazil
    Forensic Sci Int 149:99-107. 2005
  2. doi Eucalyptus applied genomics: from gene sequences to breeding tools
    Dario Grattapaglia
    Plant Genetics Laboratory, Embrapa Genetic Resources and Biotechnology, Parque Estação Biológica, Brasília 70770 970 DF, Brazil
    New Phytol 179:911-29. 2008
  3. pmc A reference linkage map for Eucalyptus
    Corey J Hudson
    School of Plant Science and CRC for Forestry, University of Tasmania, Private Bag 55 Hobart, Tasmania, 7001, Australia
    BMC Genomics 13:240. 2012
  4. pmc A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus
    Carolina P Sansaloni
    School of Plant Science and Cooperative Research Centre for Forestry, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia
    Plant Methods 6:16. 2010
  5. pmc Advancing Eucalyptus genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries
    Jorge A P Paiva
    Instituto de Investigação Científica Tropical, Centro de Florestas e dos Produtos Florestais, Tapada da Ajuda, 1349 018 Lisboa, Portugal
    BMC Genomics 12:137. 2011
  6. pmc High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
    Evandro Novaes
    School of Forest Resources and Conservation, University of Florida, PO Box 110410, Gainesville, USA
    BMC Genomics 9:312. 2008
  7. pmc Genetic mapping of quantitative trait loci controlling growth and wood quality traits in Eucalyptus grandis using a maternal half-sib family and RAPD markers
    D Grattapaglia
    Plant Genetics Laboratory, Centro Nacional de Pesquisa de Recursos Genéticos e Biotecnologia, Empresa Brasileira de Pesquisa Agropecuaria, Brazil
    Genetics 144:1205-14. 1996
  8. pmc High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species
    Dario Grattapaglia
    EMBRAPA Genetic Resources and Biotechnology Estação Parque Biológico, Final W5 Norte, Brasilia, Brazil
    BMC Plant Biol 11:65. 2011
  9. doi Genomics of growth traits in forest trees
    Dario Grattapaglia
    Embrapa Genetic Resources and Biotechnology, CP 2372, Brasília 70770 970 DF, and Graduate Program in Genomic Sciences and Biotechnology, Universidade Católica de Brasília SGAN 916 módulo B, Brasília 70790 160 DF, Brazil
    Curr Opin Plant Biol 12:148-56. 2009
  10. ncbi Retrospective selection of elite parent trees using paternity testing with microsatellite markers: an alternative short term breeding tactic for Eucalyptus
    D Grattapaglia
    Plant Genetics Laboratory, EMBRAPA Recursos Geneticos e Biotecnologia, Parque Estação Biológica, 70770 970 DF Brasilia, Brazil
    Theor Appl Genet 109:192-9. 2004

Collaborators

Detail Information

Publications25

  1. ncbi Y-chromosome STR haplotype diversity in Brazilian populations
    Dario Grattapaglia
    Heréditas Tecnologia em Análise de DNA Ltda, SHIN CA 02, Lote 19, Brasilia, DF 71505 000, Brazil
    Forensic Sci Int 149:99-107. 2005
    ..A significant haplotype diversity of 99.8% was found and 172 different haplotypes were observed in 198 chromosomes. Haplotype (14-11, 14-13-29-24-11-13-13) with five occurrences in 198 chromosomes was the most frequent in Brazil...
  2. doi Eucalyptus applied genomics: from gene sequences to breeding tools
    Dario Grattapaglia
    Plant Genetics Laboratory, Embrapa Genetic Resources and Biotechnology, Parque Estação Biológica, Brasília 70770 970 DF, Brazil
    New Phytol 179:911-29. 2008
    ....
  3. pmc A reference linkage map for Eucalyptus
    Corey J Hudson
    School of Plant Science and CRC for Forestry, University of Tasmania, Private Bag 55 Hobart, Tasmania, 7001, Australia
    BMC Genomics 13:240. 2012
    ..To provide a single reference linkage map for eucalypts a composite map was produced through the integration of data from seven independent mapping experiments (1950 individuals) using a marker-merging method...
  4. pmc A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus
    Carolina P Sansaloni
    School of Plant Science and Cooperative Research Centre for Forestry, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia
    Plant Methods 6:16. 2010
    ..We report the development of a high-density DArT genome profiling resource and demonstrate its potential for genome-wide diversity analysis and linkage mapping in several species of Eucalyptus...
  5. pmc Advancing Eucalyptus genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries
    Jorge A P Paiva
    Instituto de Investigação Científica Tropical, Centro de Florestas e dos Produtos Florestais, Tapada da Ajuda, 1349 018 Lisboa, Portugal
    BMC Genomics 12:137. 2011
    ....
  6. pmc High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
    Evandro Novaes
    School of Forest Resources and Conservation, University of Florida, PO Box 110410, Gainesville, USA
    BMC Genomics 9:312. 2008
    ..However, it is questionable how effective the sequencing of large numbers of short reads for species with essentially no prior gene sequence information will support contig assemblies and sequence annotation...
  7. pmc Genetic mapping of quantitative trait loci controlling growth and wood quality traits in Eucalyptus grandis using a maternal half-sib family and RAPD markers
    D Grattapaglia
    Plant Genetics Laboratory, Centro Nacional de Pesquisa de Recursos Genéticos e Biotecnologia, Empresa Brasileira de Pesquisa Agropecuaria, Brazil
    Genetics 144:1205-14. 1996
    ..These findings have important implications for marker-assisted tree breeding...
  8. pmc High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species
    Dario Grattapaglia
    EMBRAPA Genetic Resources and Biotechnology Estação Parque Biológico, Final W5 Norte, Brasilia, Brazil
    BMC Plant Biol 11:65. 2011
    ....
  9. doi Genomics of growth traits in forest trees
    Dario Grattapaglia
    Embrapa Genetic Resources and Biotechnology, CP 2372, Brasília 70770 970 DF, and Graduate Program in Genomic Sciences and Biotechnology, Universidade Católica de Brasília SGAN 916 módulo B, Brasília 70790 160 DF, Brazil
    Curr Opin Plant Biol 12:148-56. 2009
    ..Nonetheless, genetics and genomics are unifying disciplines that will serve well to dissect the variables and mechanisms of tree growth and development...
  10. ncbi Retrospective selection of elite parent trees using paternity testing with microsatellite markers: an alternative short term breeding tactic for Eucalyptus
    D Grattapaglia
    Plant Genetics Laboratory, EMBRAPA Recursos Geneticos e Biotecnologia, Parque Estação Biológica, 70770 970 DF Brasilia, Brazil
    Theor Appl Genet 109:192-9. 2004
    ..It should be applicable for rapidly improving the output quality of seed orchards, especially when an emergency demand for improved seed is faced by the breeder...
  11. ncbi Integrating genomics into Eucalyptus breeding
    Dario Grattapaglia
    Plant Genetics Laboratory, EMBRAPA Recursos Geneticos e Biotecnologia, Caixa Postal 02372, 70770 900 Brasília, DF, Brasil
    Genet Mol Res 3:369-79. 2004
    ..Exploiting the full power of the superior natural phenotypic variation in wood properties found in Eucalyptus genetic resources will undoubtedly be a key factor to reach this goal...
  12. doi Allele and haplotype frequency distribution in PTPN22 gene across variable ethnic groups: Implications for genetic association studies for autoimmune diseases
    Tulio C Lins
    Programa de Pós Graduação em Ciências Genômicas e Biotecnologia, Universidade Catolica de Brasilia, Brasilia, DF, Brazil
    Autoimmunity 43:308-16. 2010
    ..Correction for stratification generated by admixture should be mandatory to minimize or avoid chances of spurious association...
  13. pmc Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome
    César D Petroli
    Plant Genetics Laboratory, Embrapa Genetic Resources and Biotechnology, Brasilia, Brazil
    PLoS ONE 7:e44684. 2012
    ....
  14. ncbi A selected set of EST-derived microsatellites, polymorphic and transferable across 6 species of eucalyptus
    Danielle A Faria
    Plant Genetics Laboratory, Embrapa Genetic Resources and Biotechnology, PqEB, Brasilia, 70770 970 DF, Brazil
    J Hered 101:512-20. 2010
    ..As they were developed from conserved transcribed regions, the transferability and polymorphism of these microsatellites will most likely extend to the other 300 or more species within the same subgenus...
  15. ncbi Genetic structure and mating system of Manilkara huberi (Ducke) A. Chev., a heavily logged Amazonian timber species
    Vânia C R Azevedo
    EMBRAPA Recursos Geneticos e Biotecnologia, PqEB Final W5 Norte, CEP 70770 900, PO Box 02372, Brasilia DF, Brazil
    J Hered 98:646-54. 2007
    ..These results provide a blueprint to guide the production and conservation management policies of this valuable timber species...
  16. pmc A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus
    Leandro G Neves
    Plant Genetics Laboratory, EMBRAPA Recursos Geneticos e Biotecnologia, Parque Estação Biológica, Brasília 70770 970, DF, Brazil
    BMC Genomics 12:189. 2011
    ..We report the construction of a high-density linkage map of expressed genes for the heterozygous genome of Eucalyptus using Single Feature Polymorphism (SFP) markers...
  17. doi Genetic composition of Brazilian population samples based on a set of twenty-eight ancestry informative SNPs
    Tulio C Lins
    Programa de Pós Graduação em Ciências Genômicas e Biotecnologia, Universidade Catolica de Brasilia, Brasilia, DF, Brazil
    Am J Hum Biol 22:187-92. 2010
    ..085). The described multiplexed SNP panels can be useful tool for bioanthropological studies but it can be mainly valuable to control for spurious results in genetic association studies in admixed populations...
  18. pmc A microsatellite-based consensus linkage map for species of Eucalyptus and a novel set of 230 microsatellite markers for the genus
    Rosana P V Brondani
    EMBRAPA Recursos Geneticos e Biotecnologia, CP 02372, 70770 970 DF Brasilia, Brazil
    BMC Plant Biol 6:20. 2006
    ....
  19. pmc Microsatellite based genetic diversity and relationships among ten Creole and commercial cattle breeds raised in Brazil
    Andréa A Egito
    EMBRAPA Recursos Geneticos e Biotecnologia, CP 02372, 70770 970 Brasília, DF, Brazil
    BMC Genet 8:83. 2007
    ..The objective of this study was to assess the levels of genetic diversity, phylogenetic relationships and patterns of taurine/zebuine admixture among ten cattle breeds raised in Brazil...
  20. pmc Population analysis of vitamin D receptor polymorphisms and the role of genetic ancestry in an admixed population
    Tulio C Lins
    Programa de Pós Graduação em Ciências Genômicas e Biotecnologia, Universidade Catolica de Brasilia, Brasilia, DF, Brazil
    Genet Mol Biol 34:377-85. 2011
    ..Individual ancestry estimates were associated with VDR haplotypes. These findings reinforce the need to correct for population stratification when performing genetic association studies in admixed populations...
  21. ncbi Plant microsatellite genotyping with 4-color fluorescent detection using multiple-tailed primers
    Alexandre Missiaggia
    Laboratorio de Genética Vegetal, EMBRAPA Recursos Geneticos e Biotecnologia, Parque Estação Biológica, Brasilia, DF, Brazil
    Genet Mol Res 5:72-8. 2006
    ..This method has been particularly useful for genotyping populations of several tropical tree species addressing community-wide population genetics and conservation questions...
  22. ncbi Haplotype diversity of 17 Y-chromosome STRs in Brazilians
    Rinaldo W Pereira
    Programa de Pós Graduação em Ciências Genômicas e Biotecnologia, Universidade Catolica de Brasilia, SGAN 916 Modulo B, Bloco C, 220, 70790 160 Brasília, DF, Brazil
    Forensic Sci Int 171:226-36. 2007
  23. ncbi Population genetic structure of mahogany (Swietenia macrophylla King, Meliaceae) across the Brazilian Amazon, based on variation at microsatellite loci: implications for conservation
    Maristerra R Lemes
    Laboratório de Genética e Biologia Reprodutiva de Plantas, Instituto Nacional de Pesquisas da Amazonia, c p 478, 69011 970 Manaus AM, Brazil
    Mol Ecol 12:2875-83. 2003
    ..In addition, the occurrence of microgeographical genetic differentiation at a local scale indicates the importance of maintaining populations in their diverse habitats, especially in areas with mosaics of topography and soil...
  24. ncbi Historical genetics: spatiotemporal analysis of the formation of the Brazilian population
    Sidia M Callegari-Jacques
    Departamento de Estatistica, Instituto de Matemática, Universidade Federal do Rio Grande do Sul, Campus do Vale, 91540 000 Porto Alegre, RS, Brazil
    Am J Hum Biol 15:824-34. 2003
    ..A north-south trend of increasing European contribution was also found, in agreement with the history of the Brazilian population...
  25. ncbi Evidences for multiple maternal lineages of Caryocar brasiliense populations in the Brazilian Cerrado based on the analysis of chloroplast DNA sequences and microsatellite haplotype variation
    Rosane G Collevatti
    Pós Graduação em Ciências Genômicas, Universidade Catolica de Brasilia, SGAN 916, Mod B, Brasilia, DF Brasil 70790 160
    Mol Ecol 12:105-15. 2003
    ..The extinction of megafauna dispersers in the last glaciation may have caused a restriction in seed movement and currently, gene flow has been occurring mainly by pollen movement...