M F LensinkSummaryCountry: Belgium Publications
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Detail Information
Publications
Relating destabilizing regions to known functional sites in proteinsBenoit H Dessailly
Service de Conformation des Macromolécules Biologiques, Centre de Biologie Structurale et Bioinformatique, CP 263, Universite Libre de Bruxelles, Bruxelles, Belgium
BMC Bioinformatics 8:141. 2007..In addition, to relate destabilizing regions to known functional sites, a novel benchmark consisting of a diverse set of hand-curated protein functional sites is derived...
Penetratin-membrane association: W48/R52/W56 shield the peptide from the aqueous phaseM F Lensink
Department of Lipoprotein Chemistry, Faculty of Medicine and Health Sciences, Ghent, Belgium
Biophys J 88:939-52. 2005..Lipid disorder increases, through decreased order parameters of the lipids interacting with the penetratin side chains. Penetratin molecules at the membrane surface do not seem to aggregate...
Recognition-induced conformational changes in protein-protein dockingM F Lensink
Center for Structural Biology and Bioinformatics, Dept of Chemistry, Universite Libre De Bruxelles U L B, Boulevard de Triomphe CP 263, B 1050 Brussels, Belgium
Curr Pharm Biotechnol 9:77-86. 2008..Here we present a survey of the existing computational techniques to model protein flexibility in the context of protein-protein docking...
Response of SCP-2L domain of human MFE-2 to ligand removal: binding site closure and burial of peroxisomal targeting signalM F Lensink
Biocenter Oulu and Department of Biochemistry, University of Oulu, P.O. Box 3000, FIN-90014, Oulu, Finland
J Mol Biol 323:99-113. 2002..The results are in accordance with plant nsLTPs, where a similar accommodation of binding pocket size was found after ligand binding/removal. Furthermore, the calculations support the suggestion of a ligand-assisted targeting mechanism...
A conserved arginine plays a role in the catalytic cycle of the protein disulphide isomerasesA K Lappi
Biocenter Oulu and Department of Biochemistry, University of Oulu, P.O. Box 3000, FIN-90014, Oulu, Finland
J Mol Biol 335:283-95. 2004..This intra-domain motion resolves the apparent dichotomy of the pK(a) requirements for the C-terminal active-site cysteine...
