Olivier Gevaert

Summary

Affiliation: Katholieke Universiteit Leuven
Country: Belgium

Publications

  1. doi Prediction of cancer outcome using DNA microarray technology: past, present and future
    Olivier Gevaert
    Katholieke Universiteit Leuven, Department of Electrical Engineering ESAT SCD SISTA, Kasteelpark Arenberg 10, 3001 Leuven, Belgium 32 16 328646 32 16 32
    Expert Opin Med Diagn 3:157-65. 2009
  2. pmc Expression profiling to predict the clinical behaviour of ovarian cancer fails independent evaluation
    Olivier Gevaert
    Department of Electrical Engineering ESAT SCD SISTA, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    BMC Cancer 8:18. 2008
  3. pmc A taxonomy of epithelial human cancer and their metastases
    Olivier Gevaert
    Bioinformatics, Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Belgium
    BMC Med Genomics 2:69. 2009
  4. ncbi A framework for elucidating regulatory networks based on prior information and expression data
    Olivier Gevaert
    Katholieke Universiteit Leuven, Department of Electrical Engineering ESAT, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Ann N Y Acad Sci 1115:240-8. 2007
  5. ncbi Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks
    Olivier Gevaert
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Bioinformatics 22:e184-90. 2006
  6. ncbi Predicting the outcome of pregnancies of unknown location: Bayesian networks with expert prior information compared to logistic regression
    O Gevaert
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Leuven, Belgium, and Early Pregnancy, Gynecology Ultrasound and MAS Unit, St George s Hospital Medical School, London, UK
    Hum Reprod 21:1824-31. 2006
  7. doi Evaluation of endometrial biomarkers for semi-invasive diagnosis of endometriosis
    Cleophas M Kyama
    Leuven University Fertility Center, and Experimental Gynecology Laboratory, Department of Obstetrics and Gynecology, University Hospital Gasthuisberg, Leuven, Belgium
    Fertil Steril 95:1338-43.e1-3. 2011
  8. ncbi Integration of clinical and microarray data with kernel methods
    Anneleen Daemen
    ESAT, Department of Electrical Engineering, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Conf Proc IEEE Eng Med Biol Soc 2007:5411-5. 2007
  9. doi Recurrent copy number alterations in BRCA1-mutated ovarian tumors alter biological pathways
    Karin Leunen
    Division of Gynecological Oncology, Department of Obstetrics and Gynecology, University Hospitals Leuven, Katholieke Universiteit Leuven, Belgium
    Hum Mutat 30:1693-702. 2009
  10. doi Molecular response to cetuximab and efficacy of preoperative cetuximab-based chemoradiation in rectal cancer
    Annelies Debucquoy
    Lab of Experimental Radiotherapy, Department of Radiation Oncology, CDG Building, Box 815, University Hospital Gasthuisberg, Herestraat 49, 3000 Leuven, Belgium
    J Clin Oncol 27:2751-7. 2009

Collaborators

Detail Information

Publications16

  1. doi Prediction of cancer outcome using DNA microarray technology: past, present and future
    Olivier Gevaert
    Katholieke Universiteit Leuven, Department of Electrical Engineering ESAT SCD SISTA, Kasteelpark Arenberg 10, 3001 Leuven, Belgium 32 16 328646 32 16 32
    Expert Opin Med Diagn 3:157-65. 2009
    ....
  2. pmc Expression profiling to predict the clinical behaviour of ovarian cancer fails independent evaluation
    Olivier Gevaert
    Department of Electrical Engineering ESAT SCD SISTA, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    BMC Cancer 8:18. 2008
    ..92% accuracy using leave-one-out cross validation techniques in combination with Least Squares Support Vector Machines (LS-SVMs)...
  3. pmc A taxonomy of epithelial human cancer and their metastases
    Olivier Gevaert
    Bioinformatics, Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Belgium
    BMC Med Genomics 2:69. 2009
    ..Additionally, it has not yet been extensively investigated whether metastases resemble their tissue of origin or tissue of destination...
  4. ncbi A framework for elucidating regulatory networks based on prior information and expression data
    Olivier Gevaert
    Katholieke Universiteit Leuven, Department of Electrical Engineering ESAT, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Ann N Y Acad Sci 1115:240-8. 2007
    ..Moreover this approach can easily be extended with other data sources. In such a way Bayesian networks provide a powerful framework for data integration and regulatory network modeling...
  5. ncbi Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks
    Olivier Gevaert
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Bioinformatics 22:e184-90. 2006
    ..Therefore Bayesian networks automatically perform feature selection by identifying the (in)dependency relationships with the class variable...
  6. ncbi Predicting the outcome of pregnancies of unknown location: Bayesian networks with expert prior information compared to logistic regression
    O Gevaert
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Leuven, Belgium, and Early Pregnancy, Gynecology Ultrasound and MAS Unit, St George s Hospital Medical School, London, UK
    Hum Reprod 21:1824-31. 2006
    ..Some of these women will have an ectopic pregnancy (EP), and it is this group in the PUL population that poses the greatest concern. The aim of this study was to develop Bayesian networks to predict EPs in the PUL population...
  7. doi Evaluation of endometrial biomarkers for semi-invasive diagnosis of endometriosis
    Cleophas M Kyama
    Leuven University Fertility Center, and Experimental Gynecology Laboratory, Department of Obstetrics and Gynecology, University Hospital Gasthuisberg, Leuven, Belgium
    Fertil Steril 95:1338-43.e1-3. 2011
    ....
  8. ncbi Integration of clinical and microarray data with kernel methods
    Anneleen Daemen
    ESAT, Department of Electrical Engineering, Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
    Conf Proc IEEE Eng Med Biol Soc 2007:5411-5. 2007
    ....
  9. doi Recurrent copy number alterations in BRCA1-mutated ovarian tumors alter biological pathways
    Karin Leunen
    Division of Gynecological Oncology, Department of Obstetrics and Gynecology, University Hospitals Leuven, Katholieke Universiteit Leuven, Belgium
    Hum Mutat 30:1693-702. 2009
    ..Moreover, important biological pathways are altered differentially when compared to the sporadic group...
  10. doi Molecular response to cetuximab and efficacy of preoperative cetuximab-based chemoradiation in rectal cancer
    Annelies Debucquoy
    Lab of Experimental Radiotherapy, Department of Radiation Oncology, CDG Building, Box 815, University Hospital Gasthuisberg, Herestraat 49, 3000 Leuven, Belgium
    J Clin Oncol 27:2751-7. 2009
    ....
  11. pmc Improved microarray-based decision support with graph encoded interactome data
    Anneleen Daemen
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Leuven, Belgium
    PLoS ONE 5:e10225. 2010
    ..Moreover, this strategy can be incorporated in any kernel method or non-linear version of a non-kernel method...
  12. pmc A kernel-based integration of genome-wide data for clinical decision support
    Anneleen Daemen
    Department of Electrical Engineering ESAT SCD, Katholieke Universiteit Leuven, Kasteelpark Arenberg, 3001 Leuven, Belgium
    Genome Med 1:39. 2009
    ..We acknowledge that, in a first phase, this will substantially increase costs; however, this is a necessary investment to ultimately obtain cost-efficient models usable in patient tailored therapy...
  13. pmc TRIzol treatment of secretory phase endometrium allows combined proteomic and mRNA microarray analysis of the same sample in women with and without endometriosis
    Amelie Fassbender
    Leuven University Fertility Centre, Department of Obstetrics and Gynaecology, University Hospital Gasthuisberg, Leuven, Belgium
    Reprod Biol Endocrinol 8:123. 2010
    ....
  14. ncbi Diagnostic accuracy of varying discriminatory zones for the prediction of ectopic pregnancy in women with a pregnancy of unknown location
    G Condous
    Early Pregnancy, Gynaecological Ultrasound and Minimal Access Surgery Unit, Department of Obstetrics and Gynaecology, St George s Hospital Medical School, London, UK
    Ultrasound Obstet Gynecol 26:770-5. 2005
    ..We evaluated the diagnostic accuracy of discriminatory zones for serum hCG levels of > 1000 IU/L, 1500 IU/L and 2000 IU/L for the detection of ectopic pregnancy in such women...
  15. doi Atypical neurofibromas in neurofibromatosis type 1 are premalignant tumors
    Eline Beert
    Department of Human Genetics, Catholic University Leuven, Leuven, Belgium
    Genes Chromosomes Cancer 50:1021-32. 2011
    ..These data support the hypothesis that atypical neurofibromas are premalignant tumors, with the CDKN2A/B deletion as the first step in the progression toward MPNST...
  16. ncbi Molecular profiling of platinum resistant ovarian cancer: use of the model in clinical practice
    Olivier Gevaert
    Int J Cancer 119:1511; author reply 1512. 2006