Matthias Samwald

Summary

Affiliation: Medical University of Vienna
Country: Austria

Publications

  1. doi request reprint Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies
    Matthias Samwald
    Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Spitalgasse 23, 1090, Vienna, Austria
    BMC Med Inform Decis Mak 15:130. 2015
  2. pmc Pharmacogenomics in the pocket of every patient? A prototype based on quick response codes
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Vienna, Austria
    J Am Med Inform Assoc 20:409-12. 2013
  3. doi request reprint The Arden Syntax standard for clinical decision support: experiences and directions
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Spitalgasse 23, A 1090 Vienna, Austria
    J Biomed Inform 45:711-8. 2012
  4. pmc The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside
    Joanne S Luciano
    Rensselaer Polytechnic Institute, Troy, NY, USA
    J Biomed Semantics 2:S1. 2011
  5. pmc An RDF/OWL knowledge base for query answering and decision support in clinical pharmacogenetics
    Matthias Samwald
    Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 192:539-42. 2013
  6. ncbi request reprint Physicians searching the web for medical question answering: a European survey and local user studies
    Matthias Samwald
    Institute of Software Technology and Interactive Systems, Vienna University of Technology, Vienna, Austria
    Stud Health Technol Inform 192:1103. 2013
  7. ncbi request reprint Towards a global IT system for personalized medicine: the Medicine Safety Code initiative
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 205:261-5. 2014
  8. ncbi request reprint Towards a global IT system for personalized medicine: the Medicine Safety Code initiative
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 198:25-31. 2014
  9. ncbi request reprint Towards an interoperable information infrastructure providing decision support for genomic medicine
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna
    Stud Health Technol Inform 169:165-9. 2011
  10. pmc An ontology-based, mobile-optimized system for pharmacogenomic decision support at the point-of-care
    Jose Antonio Miñarro-Gimenez
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Vienna, Austria
    PLoS ONE 9:e93769. 2014

Collaborators

  • Klaus Peter Adlassnig
  • Richard D Boyce
  • Michel Dumontier
  • Aslı Suner
  • Jose Antonio Miñarro-Gimenez
  • Marlene Kritz
  • Gökhan Karakülah
  • Joanne S Luciano
  • Kathrin Blagec
  • Oscar Marín-Alonso
  • Veronika Stefanov
  • Allan Hanbury
  • Manfred Gschwandtner
  • Bosse Andersson
  • Scott M Marshall
  • Thomas Gambet
  • Timothy Lebo
  • Christopher Domarew
  • Vipul Kashyap
  • Anja Jentzsch
  • Colin Batchelor
  • Tim Clark
  • Jun Zhao
  • Lynn Schriml
  • Robert L Powers
  • Christine K Denney
  • Olivier Bodenreider
  • Patricia L Whetzel
  • Lee Harland
  • James P McCusker
  • Chimezie Ogbuji
  • Deborah L McGuinness
  • Julia Kozlovsky
  • Peter J Tonellato
  • Elgar Pichler
  • Péter Kós
  • Eric Prud'hommeaux
  • Susie Stephens

Detail Information

Publications14

  1. doi request reprint Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies
    Matthias Samwald
    Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Spitalgasse 23, 1090, Vienna, Austria
    BMC Med Inform Decis Mak 15:130. 2015
    ..This is a source of potential ambiguity and complexity, making it difficult to create reliable information technology systems for enabling clinical pharmacogenomics...
  2. pmc Pharmacogenomics in the pocket of every patient? A prototype based on quick response codes
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Vienna, Austria
    J Am Med Inform Assoc 20:409-12. 2013
    ..The MSC could make individual pharmacogenomic data and decision support available in a wide variety of healthcare settings without the set up of large-scale infrastructures or centralized databases...
  3. doi request reprint The Arden Syntax standard for clinical decision support: experiences and directions
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Spitalgasse 23, A 1090 Vienna, Austria
    J Biomed Inform 45:711-8. 2012
    ..We hope that these planned extensions of the Arden Syntax might eventually help in realizing the vision of a global, interoperable and shared library of clinical decision support knowledge...
  4. pmc The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside
    Joanne S Luciano
    Rensselaer Polytechnic Institute, Troy, NY, USA
    J Biomed Semantics 2:S1. 2011
    ..Here, we describe a collaborative effort to produce a prototype Translational Medicine Knowledge Base (TMKB) capable of answering questions relating to clinical practice and pharmaceutical drug discovery...
  5. pmc An RDF/OWL knowledge base for query answering and decision support in clinical pharmacogenetics
    Matthias Samwald
    Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 192:539-42. 2013
    ..Our work goes beyond the state of the art in that it makes both automated reasoning as well as query answering as simple as possible, and the reasoning capabilities go beyond the capabilities of previously described ontologies. ..
  6. ncbi request reprint Physicians searching the web for medical question answering: a European survey and local user studies
    Matthias Samwald
    Institute of Software Technology and Interactive Systems, Vienna University of Technology, Vienna, Austria
    Stud Health Technol Inform 192:1103. 2013
    ..We also found user testing a valuable source of information about the search preferences of medical professional. The survey and user tests we conducted are among the largest and most detailed that have been conducted in this domain. ..
  7. ncbi request reprint Towards a global IT system for personalized medicine: the Medicine Safety Code initiative
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 205:261-5. 2014
    ....
  8. ncbi request reprint Towards a global IT system for personalized medicine: the Medicine Safety Code initiative
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 198:25-31. 2014
    ....
  9. ncbi request reprint Towards an interoperable information infrastructure providing decision support for genomic medicine
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna
    Stud Health Technol Inform 169:165-9. 2011
    ....
  10. pmc An ontology-based, mobile-optimized system for pharmacogenomic decision support at the point-of-care
    Jose Antonio Miñarro-Gimenez
    Section for Medical Expert and Knowledge Based Systems, Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Vienna, Austria
    PLoS ONE 9:e93769. 2014
    ..This approach aims to ensure appropriate medical treatment and avoid, or properly manage, undesired side effects...
  11. ncbi request reprint A data-driven living review for pharmacogenomic decision support in cancer treatment
    Gökhan Karakülah
    Medical University of Vienna, Austria
    Stud Health Technol Inform 180:688-92. 2012
    ..We discuss some of the findings we made while creating a prototype of a 'living review' for colorectal cancer pharmacotherapy...
  12. pmc Utilization and perceived problems of online medical resources and search tools among different groups of European physicians
    Marlene Kritz
    Society of Physicians Vienna, Vienna, Austria
    J Med Internet Res 15:e122. 2013
    ..There is a large body of research suggesting that medical professionals have unmet information needs during their daily routines...
  13. ncbi request reprint An open-source, mobile-friendly search engine for public medical knowledge
    Matthias Samwald
    Section for Medical Expert and Knowledge Based Systems Center for Medical Statistics, Informatics, and Intelligent Systems Medical University of Vienna, Austria
    Stud Health Technol Inform 205:358-62. 2014
    ..In a preliminary evaluation, the quality of results from FindMeEvidence proved to be competitive with those from TRIP Database, an established, closed-source search engine for evidence-based medicine. ..
  14. ncbi request reprint Exploring the application of deep learning techniques on medical text corpora
    Jose Antonio Miñarro-Gimenez
    Section for Medical Expert and Knowledge Based Systems, Medical University of Vienna, Vienna, Austria
    Stud Health Technol Inform 205:584-8. 2014
    ....