Andreas W Schreiber

Summary

Affiliation: University of Adelaide
Country: Australia

Publications

  1. pmc Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 13:492. 2012
  2. ncbi A framework for gene expression analysis
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Hartley Grove, PMB 1 Waite Campus, The University of Adelaide Glen Osmond 5064, Australia
    Bioinformatics 23:191-7. 2007
  3. pmc Combining transcriptional datasets using the generalized singular value decomposition
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, School of Agriculture and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA 5064, Australia
    BMC Bioinformatics 9:335. 2008
  4. pmc Comparative transcriptomics in the Triticeae
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 10:285. 2009
  5. pmc Discovery of barley miRNAs through deep sequencing of short reads
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, The University of Adelaide, South Australia 5064, Australia
    BMC Genomics 12:129. 2011
  6. pmc Cell-specific vacuolar calcium storage mediated by CAX1 regulates apoplastic calcium concentration, gas exchange, and plant productivity in Arabidopsis
    Simon J Conn
    School of Agriculture, Food, and Wine, University of Adelaide, Glen Osmond, South Australia 5064, Australia
    Plant Cell 23:240-57. 2011
  7. pmc Sequencing error correction without a reference genome
    Julie A Sleep
    Australian Centre for Plant Functional Genomics, The University of Adelaide, Urrbrae, SA 5064, Australia
    BMC Bioinformatics 14:367. 2013

Detail Information

Publications7

  1. pmc Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 13:492. 2012
    ..Here we report on an alternate approach, a direct homoeolog-specific assembly of the expressed portion of the genome, the transcriptome...
  2. ncbi A framework for gene expression analysis
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Hartley Grove, PMB 1 Waite Campus, The University of Adelaide Glen Osmond 5064, Australia
    Bioinformatics 23:191-7. 2007
    ..To improve this situation, a better understanding of the expected relationships between expression profiles of genes associated by biological function is required...
  3. pmc Combining transcriptional datasets using the generalized singular value decomposition
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, School of Agriculture and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA 5064, Australia
    BMC Bioinformatics 9:335. 2008
    ..These difficulties are exacerbated if there is only partial overlap between the experimental conditions and genes probed in the two datasets...
  4. pmc Comparative transcriptomics in the Triticeae
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 10:285. 2009
    ..The advent of two genome-scale Affymetrix GeneChips now allows studies of the comparison of their transcriptomes...
  5. pmc Discovery of barley miRNAs through deep sequencing of short reads
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, The University of Adelaide, South Australia 5064, Australia
    BMC Genomics 12:129. 2011
    ..However, miRNAs from barley, one of the most important cereal crops, remain unknown...
  6. pmc Cell-specific vacuolar calcium storage mediated by CAX1 regulates apoplastic calcium concentration, gas exchange, and plant productivity in Arabidopsis
    Simon J Conn
    School of Agriculture, Food, and Wine, University of Adelaide, Glen Osmond, South Australia 5064, Australia
    Plant Cell 23:240-57. 2011
    ..We establish CAX1 as a key regulator of apoplastic [Ca(2+)] through compartmentation into mesophyll vacuoles, a mechanism essential for optimal plant function and productivity...
  7. pmc Sequencing error correction without a reference genome
    Julie A Sleep
    Australian Centre for Plant Functional Genomics, The University of Adelaide, Urrbrae, SA 5064, Australia
    BMC Bioinformatics 14:367. 2013
    ..Identifying sequencing errors from true biological variants is a challenging task. For organisms without a reference genome this difficulty is even more challenging...