Greg Gibson

Summary

Affiliation: University of Queensland
Country: Australia

Publications

  1. ncbi request reprint The quantitative genetics of transcription
    Greg Gibson
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, NC 37695 7614, USA
    Trends Genet 21:616-23. 2005
  2. ncbi request reprint Analysis of variance of microarray data
    Julien F Ayroles
    Department of Genetics, North Carolina State University, Raleigh, NC, USA
    Methods Enzymol 411:214-33. 2006
  3. doi request reprint The environmental contribution to gene expression profiles
    Greg Gibson
    School of Integrative Biology, The University of Queensland, Goddard Building, St Lucia Campus, Brisbane, Queensland 4072, Australia
    Nat Rev Genet 9:575-81. 2008
  4. pmc Genetic and nongenetic variation revealed for the principal components of human gene expression
    Anita Goldinger
    University of Queensland Diamantina Institute, The Translational Research Institute, Brisbane, Queensland 4102, Australia
    Genetics 195:1117-28. 2013
  5. pmc Detection and replication of epistasis influencing transcription in humans
    Gibran Hemani
    1 Queensland Brain Institute, University of Queensland, Brisbane, Queensland 4072, Australia 2 University of Queensland Diamantina Institute, University of Queensland, Princess Alexandra Hospital, Brisbane, Queensland 4072, Australia
    Nature 508:249-53. 2014
  6. pmc Congruence of additive and non-additive effects on gene expression estimated from pedigree and SNP data
    Joseph E Powell
    University of Queensland Diamantina Institute, University of Queensland, Princess Alexandra Hospital, Brisbane, Queensland, Australia
    PLoS Genet 9:e1003502. 2013
  7. doi request reprint Decanalization and the origin of complex disease
    Greg Gibson
    School of Integrative Biology, Goddard Building, St Lucia Campus, University of Queensland, Brisbane, Queensland 4072, Australia
    Nat Rev Genet 10:134-40. 2009
  8. pmc Microarray analysis: genome-scale hypothesis scanning
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, North Carolina, USA
    PLoS Biol 1:E15. 2003
  9. pmc Comparison of regional gene expression differences in the brains of the domestic dog and human
    Erin Kennerly
    Department of Genetics, College of Agriculture and Life Sciences, North Carolina State University, Raleigh, NC 27695, USA
    Hum Genomics 1:435-43. 2004
  10. ncbi request reprint Evolution: the plastic transcriptome
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, 27695 7614, USA
    Curr Biol 16:R285-7. 2006

Collaborators

Detail Information

Publications29

  1. ncbi request reprint The quantitative genetics of transcription
    Greg Gibson
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, NC 37695 7614, USA
    Trends Genet 21:616-23. 2005
    ..The implications of these findings for genotype-phenotype mapping and modeling the evolution of transcription are discussed...
  2. ncbi request reprint Analysis of variance of microarray data
    Julien F Ayroles
    Department of Genetics, North Carolina State University, Raleigh, NC, USA
    Methods Enzymol 411:214-33. 2006
    ..Commercial and open-source software for performing ANOVA is widely available...
  3. doi request reprint The environmental contribution to gene expression profiles
    Greg Gibson
    School of Integrative Biology, The University of Queensland, Goddard Building, St Lucia Campus, Brisbane, Queensland 4072, Australia
    Nat Rev Genet 9:575-81. 2008
    ..Incorporating estimates of genetic relationships into study designs will facilitate genomic analysis of environmental plasticity by aiding the identification of major regulatory loci in natural populations...
  4. pmc Genetic and nongenetic variation revealed for the principal components of human gene expression
    Anita Goldinger
    University of Queensland Diamantina Institute, The Translational Research Institute, Brisbane, Queensland 4102, Australia
    Genetics 195:1117-28. 2013
    ..Therefore, this study highlights the danger of eliminating biologically relevant data when employing PC correction in gene expression data. ..
  5. pmc Detection and replication of epistasis influencing transcription in humans
    Gibran Hemani
    1 Queensland Brain Institute, University of Queensland, Brisbane, Queensland 4072, Australia 2 University of Queensland Diamantina Institute, University of Queensland, Princess Alexandra Hospital, Brisbane, Queensland 4072, Australia
    Nature 508:249-53. 2014
    ..This study presents the first evidence, to our knowledge, for many instances of segregating common polymorphisms interacting to influence human traits. ..
  6. pmc Congruence of additive and non-additive effects on gene expression estimated from pedigree and SNP data
    Joseph E Powell
    University of Queensland Diamantina Institute, University of Queensland, Princess Alexandra Hospital, Brisbane, Queensland, Australia
    PLoS Genet 9:e1003502. 2013
    ..Consistent with the genetic architecture of common diseases, gene expression is predominantly additive, but a minority of transcripts display non-additive effects...
  7. doi request reprint Decanalization and the origin of complex disease
    Greg Gibson
    School of Integrative Biology, Goddard Building, St Lucia Campus, University of Queensland, Brisbane, Queensland 4072, Australia
    Nat Rev Genet 10:134-40. 2009
    ..The rapid evolution of the human genome combined with marked environmental and cultural perturbation in the past two generations might lead to the uncovering of cryptic genetic variation that is a major source of disease susceptibility...
  8. pmc Microarray analysis: genome-scale hypothesis scanning
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, North Carolina, USA
    PLoS Biol 1:E15. 2003
  9. pmc Comparison of regional gene expression differences in the brains of the domestic dog and human
    Erin Kennerly
    Department of Genetics, College of Agriculture and Life Sciences, North Carolina State University, Raleigh, NC 27695, USA
    Hum Genomics 1:435-43. 2004
    ..This study lays the foundation for detailed analysis of the population structure of transcriptional variation as it relates to cognitive and neurological phenotypes in the domestic dog...
  10. ncbi request reprint Evolution: the plastic transcriptome
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, 27695 7614, USA
    Curr Biol 16:R285-7. 2006
    ....
  11. pmc Simultaneous clustering of gene expression data with clinical chemistry and pathological evaluations reveals phenotypic prototypes
    Pierre R Bushel
    National Center for Toxicogenomics, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA
    BMC Syst Biol 1:15. 2007
    ..The inability of clustering algorithms to incorporate biological data in the grouping process can limit proper interpretation of the data and its underlying biology...
  12. pmc Mixture modeling of transcript abundance classes in natural populations
    Wen Ping Hsieh
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, North Carolina 27695 7614, USA
    Genome Biol 8:R98. 2007
    ..Here, we explore the distributions of cis-acting and trans-acting factors and their relative contributions to expression of transcripts that exhibit two or more classes of abundance among individuals within populations...
  13. ncbi request reprint Evolution of genes and genomes on the Drosophila phylogeny
    Andrew G Clark
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Nature 450:203-18. 2007
    ..These may prove to underlie differences in the ecology and behaviour of these diverse species...
  14. pmc A genome-wide gene expression signature of environmental geography in leukocytes of Moroccan Amazighs
    Youssef Idaghdour
    North Carolina State University, Raleigh, North Carolina, United States of America
    PLoS Genet 4:e1000052. 2008
    ....
  15. doi request reprint A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)
    Erin Kennerly
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, NC 27695 7614, USA
    Mol Ecol 17:2782-91. 2008
    ....
  16. ncbi request reprint Greg Gibson
    Greg Gibson
    Department of Genetics, North Carolina State University, Gardner Hall, Raleigh, North Carolina 27695 7614, USA
    Curr Biol 15:R531-2. 2005
  17. ncbi request reprint Gene expression profiles associated with the transition to parasitism in Ancylostoma caninum larvae
    Jennifer M Moser
    Department of Genetics, North Carolina State University, Raleigh, NC 27695, USA
    Mol Biochem Parasitol 143:39-48. 2005
    ..Comparison of two strains of A. caninum from North Carolina and Maryland only identified a single gene, one of the members of the ASP family, that was differentially repressed upon serum stimulation...
  18. ncbi request reprint A genetic attack on the defense complex
    Greg Gibson
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, NC 27695 7614, USA
    Bioessays 24:487-9. 2002
    ..This species has undergone rapid and parallel morphological and behavioral evolution, and there is now hope that some of the genes responsible for the divergence may soon be identified...
  19. ncbi request reprint Enabling population and quantitative genomics
    Greg Gibson
    Department of Genetics, Gardner Hall, North Carolina State University, Raleigh, NC 27695 7614, USA
    Genet Res 80:1-6. 2002
    ..Here we discuss the set of community-wide genetic and molecular resources, including panels of specific types of inbred lines and high density resequencing and SNP detection, that will facilitate such studies...
  20. pmc Mixed-model reanalysis of primate data suggests tissue and species biases in oligonucleotide-based gene expression profiles
    Wen Ping Hsieh
    Bioinformatics Research Center, North Carolina State University, Raleigh, North Carolina 27695, USA
    Genetics 165:747-57. 2003
    ..A small subset of genes that are candidates for adaptive divergence may be identified on the basis of a high ratio of interspecific to intraspecific divergence...
  21. ncbi request reprint Perspective: Evolution and detection of genetic robustness
    J Arjan G M de Visser
    Department of Genetics, Wageningen University, Arboretumlaan 4, 6703 BD Wageningen, The Netherlands
    Evolution 57:1959-72. 2003
    ....
  22. pmc Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans
    Jose M Ranz
    Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, USA
    Genome Res 14:373-9. 2004
    ..The net result of the multiple incompatibilities is that the gene-expression profiles of the parental females are more similar to each other than either is to that of the hybrid...
  23. pmc Cross-species comparison of genome-wide expression patterns
    Xianghong Jasmine Zhou
    Department of Genetics, North Carolina State University, Raleigh, NC 27695 7614, USA
    Genome Biol 5:232. 2004
    ..Recent studies have used cross-species comparisons of expression profiles to annotate gene functions, to draw evolutionary inferences concerning specific biological processes and to study the global properties of expression networks...
  24. ncbi request reprint Genes regulated by mating, sperm, or seminal proteins in mated female Drosophila melanogaster
    Lisa A McGraw
    Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA
    Curr Biol 14:1509-14. 2004
    ..The mating-dependent genes that we have identified contribute to many biological processes including metabolism, immune defense, and protein modification...
  25. pmc Extensive sex-specific nonadditivity of gene expression in Drosophila melanogaster
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, North Carolina 27695, USA
    Genetics 167:1791-9. 2004
    ..Strikingly, while 25% of all genes differ between the two parents, 33% differ between both F1's and the parents, averaged across sexes. However, only 5% of genes show overdominance, suggesting that heterosis for expression is rare...
  26. pmc Replication of an Egfr-wing shape association in a wild-caught cohort of Drosophila melanogaster
    Ian Dworkin
    Department of Genetics, North Carolina State University, Raleigh, 27695 7614, USA
    Genetics 169:2115-25. 2005
    ..These results are discussed both within the framework of future association-mapping studies and within the context of the evolutionary dynamics of alleles in populations...
  27. ncbi request reprint Evolution. The synthesis and evolution of a supermodel
    Greg Gibson
    Department of Genetics, North Carolina State University, Raleigh, NC 27695, USA
    Science 307:1890-1. 2005
  28. ncbi request reprint Mutation accumulation of the transcriptome
    Greg Gibson
    Nat Genet 37:458-60. 2005
  29. ncbi request reprint Microarrays in ecology and evolution: a preview
    Greg Gibson
    Department of Genetics, North Carolina State University, Gardner Hall, Raleigh, NC 27695 7614, USA
    Mol Ecol 11:17-24. 2002
    ....