C Lynne McIntyre

Summary

Country: Australia

Publications

  1. ncbi request reprint Prediction of hybrid performance in grain sorghum using RFLP markers
    D R Jordan
    Department of Primary Industries, Hermitage Research Station, Warwick, Queensland 4370, Australia
    Theor Appl Genet 106:559-67. 2003
  2. ncbi request reprint Molecular characterization of the waxy locus in sorghum
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067 Australia
    Genome 51:524-33. 2008
  3. doi request reprint Linked gene networks involved in nitrogen and carbon metabolism and levels of water-soluble carbohydrate accumulation in wheat stems
    C Lynne McIntyre
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Funct Integr Genomics 11:585-97. 2011
  4. doi request reprint Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed conditions
    C Lynne McIntyre
    CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD 4067, Australia
    Theor Appl Genet 120:527-41. 2010
  5. ncbi request reprint Homologues of the maize rust resistance gene Rp1-D are genetically associated with a major rust resistance QTL in sorghum
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia
    Theor Appl Genet 109:875-83. 2004
  6. ncbi request reprint Resistance gene analogues in sugarcane and sorghum and their association with quantitative trait loci for rust resistance
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, Brisbane, Australia
    Genome 48:391-400. 2005
  7. doi request reprint TaMYB13 is a transcriptional activator of fructosyltransferase genes involved in β-2,6-linked fructan synthesis in wheat
    Gang Ping Xue
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Plant J 68:857-70. 2011
  8. ncbi request reprint Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profiling
    Rosanne E Casu
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Queensland 4067, Australia
    Plant Mol Biol 54:503-17. 2004
  9. doi request reprint TaNF-YC11, one of the light-upregulated NF-YC members in Triticum aestivum, is co-regulated with photosynthesis-related genes
    Troy J Stephenson
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD, 4067, Australia
    Funct Integr Genomics 10:265-76. 2010
  10. pmc Molecular dissection of variation in carbohydrate metabolism related to water-soluble carbohydrate accumulation in stems of wheat
    Gang Ping Xue
    CSIRO Plant Industry, St Lucia, Brisbane, Queensland 4067, Australia
    Plant Physiol 146:441-54. 2008

Detail Information

Publications30

  1. ncbi request reprint Prediction of hybrid performance in grain sorghum using RFLP markers
    D R Jordan
    Department of Primary Industries, Hermitage Research Station, Warwick, Queensland 4370, Australia
    Theor Appl Genet 106:559-67. 2003
    ..A model combining phenotypic trait data and parental diversity on particular linkage groups explained 71% of the variation in grain yield and has potential for use in the selection of heterotic hybrids...
  2. ncbi request reprint Molecular characterization of the waxy locus in sorghum
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067 Australia
    Genome 51:524-33. 2008
    ..Thus, these indel markers or sequence-based SNP markers can be used to follow waxy alleles in sorghum breeding programs in selected pedigrees...
  3. doi request reprint Linked gene networks involved in nitrogen and carbon metabolism and levels of water-soluble carbohydrate accumulation in wheat stems
    C Lynne McIntyre
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Funct Integr Genomics 11:585-97. 2011
    ..Our results suggest that the assimilation of nitrogen into amino acids is an important factor that influences the levels of WSC in the stems of field-grown wheat...
  4. doi request reprint Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed conditions
    C Lynne McIntyre
    CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD 4067, Australia
    Theor Appl Genet 120:527-41. 2010
    ....
  5. ncbi request reprint Homologues of the maize rust resistance gene Rp1-D are genetically associated with a major rust resistance QTL in sorghum
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia
    Theor Appl Genet 109:875-83. 2004
    ..These results suggest a conservation of function and gene sequence homology at the Rp1 loci of maize and sorghum and provide a basis for convenient PCR-based screening tools for putative rust resistance alleles in sorghum...
  6. ncbi request reprint Resistance gene analogues in sugarcane and sorghum and their association with quantitative trait loci for rust resistance
    C L McIntyre
    CSIRO Plant Industry, Queensland Bioscience Precinct, Brisbane, Australia
    Genome 48:391-400. 2005
    ..These results illustrate the value of using RGAs for the identification of markers linked to disease resistance loci and the value of simultaneous mapping in sugarcane and sorghum...
  7. doi request reprint TaMYB13 is a transcriptional activator of fructosyltransferase genes involved in β-2,6-linked fructan synthesis in wheat
    Gang Ping Xue
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Plant J 68:857-70. 2011
    ..These data suggest that TaMYB13 and its orthologues are positive regulators for controlling the expression of major fructosyltransferases involved in the fructan synthetic pathway in temperate cereals...
  8. ncbi request reprint Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profiling
    Rosanne E Casu
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Queensland 4067, Australia
    Plant Mol Biol 54:503-17. 2004
    ....
  9. doi request reprint TaNF-YC11, one of the light-upregulated NF-YC members in Triticum aestivum, is co-regulated with photosynthesis-related genes
    Troy J Stephenson
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD, 4067, Australia
    Funct Integr Genomics 10:265-76. 2010
    ..These data indicate that TaNF-YC11 is potentially involved in regulation of photosynthesis-related genes...
  10. pmc Molecular dissection of variation in carbohydrate metabolism related to water-soluble carbohydrate accumulation in stems of wheat
    Gang Ping Xue
    CSIRO Plant Industry, St Lucia, Brisbane, Queensland 4067, Australia
    Plant Physiol 146:441-54. 2008
    ..These data suggest that differential carbon partitioning in the wheat stem is one mechanism that contributes to genotypic variation in WSC accumulation...
  11. doi request reprint Dissecting the molecular basis of the contribution of source strength to high fructan accumulation in wheat
    Gang Ping Xue
    CSIRO Plant Industry, St Lucia, QLD 4067, Australia
    Plant Mol Biol 81:71-92. 2013
    ..These data suggest that high source strength is one of the important genetic factors determining high levels of WSC in wheat...
  12. ncbi request reprint Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulation
    Lindsay M Shaw
    CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, Australia
    Funct Integr Genomics 9:485-98. 2009
    ..These data suggest that the TaDof family may have an important role in light-mediated gene regulation, including involvement in the photosynthetic process...
  13. pmc TaMYB13-1, a R2R3 MYB transcription factor, regulates the fructan synthetic pathway and contributes to enhanced fructan accumulation in bread wheat
    Maarten Kooiker
    CSIRO Plant Industry, 306 Carmody Rd, St Lucia, Brisbane, QLD 4067, Australia
    J Exp Bot 64:3681-96. 2013
    ..These data suggest that TaMYB13-1 plays an important role in coordinated upregulation of genes necessary for fructan synthesis and can be used as a molecular tool to improve the high fructan trait. ..
  14. doi request reprint Use of expression analysis to dissect alterations in carbohydrate metabolism in wheat leaves during drought stress
    Gang Ping Xue
    CSIRO Plant Industry, St Lucia, QLD 4067, Australia
    Plant Mol Biol 67:197-214. 2008
    ....
  15. ncbi request reprint Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum
    Troy J Stephenson
    CSIRO Plant Industry, St Lucia, QLD, Australia
    Plant Mol Biol 65:77-92. 2007
    ..Organ-specific expression and differential response to drought indicate a plant-specific biological role for various members of this transcription factor family...
  16. ncbi request reprint Differential gene expression of wheat progeny with contrasting levels of transpiration efficiency
    Gang Ping Xue
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD, 4067, Australia
    Plant Mol Biol 61:863-81. 2006
    ..These data indicate that some of these TE differentially expressed genes are candidates for investigating processes that underlie the high TE trait or for use as expression quantitative trait loci (eQTLs) for TE...
  17. doi request reprint TaNF-YB3 is involved in the regulation of photosynthesis genes in Triticum aestivum
    Troy J Stephenson
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia
    Funct Integr Genomics 11:327-40. 2011
    ..These results indicate that TaNF-YB3 is involved in the positive regulation of a number of photosynthesis genes in wheat...
  18. pmc A novel and major quantitative trait locus for fusarium crown rot resistance in a genotype of Wild Barley (Hordeum spontaneum L.)
    Guangdeng Chen
    Commonwealth Scientific and Industrial Research Organisation CSIRO Plant Industry, St Lucia, Queensland, Australia
    PLoS ONE 8:e58040. 2013
    ..cpi-4H locus in the mapping population. Existing data indicate that, although growth rate may affect FCR resistance, different genes at this locus are likely involved in controlling these two traits...
  19. doi request reprint Overexpression of TaNAC69 leads to enhanced transcript levels of stress up-regulated genes and dehydration tolerance in bread wheat
    Gang Ping Xue
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Mol Plant 4:697-712. 2011
    ..These data suggest that TaNAC69 is involved in regulating stress up-regulated genes and wheat adaptation to drought stress...
  20. ncbi request reprint Identification of a novel sugar transporter homologue strongly expressed in maturing stem vascular tissues of sugarcane by expressed sequence tag and microarray analysis
    Rosanne E Casu
    CSIRO Plant Industry, 120 Meiers Road, Indooroopilly, Queensland, 4068, Australia
    Plant Mol Biol 52:371-86. 2003
    ..This study demonstrates the utility of genomic approaches using large-scale EST acquisition and microarray hybridization techniques for studies of the developmental regulation of metabolic enzymes and potential transporters in sugarcane...
  21. ncbi request reprint Associations between DNA markers and resistance to diseases in sugarcane and effects of population substructure
    Xianming Wei
    BSES Limited, PMB57, Mackay Mail Centre, Mackay, QLD, 4741, Australia
    Theor Appl Genet 114:155-64. 2006
    ..This may be due to special features of past sugarcane breeding programs leading to persistent linkage disequilibrium in modern parental populations...
  22. pmc The heat shock factor family from Triticum aestivum in response to heat and other major abiotic stresses and their role in regulation of heat shock protein genes
    Gang Ping Xue
    CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD 4067, Australia
    J Exp Bot 65:539-57. 2014
    ..An activation motif in the C-terminal domain of TaHsfC2a was identified by amino residue substitution analysis. These data demonstrate the role of HsfA and HsfC2 in regulation of Hsp genes in wheat. ..
  23. ncbi request reprint Identifications of two different mechanisms for sorghum midge resistance through QTL mapping
    Y Z Tao
    QDPI Hermitage Research Station, Warwick, QLD 4370, Australia
    Theor Appl Genet 107:116-22. 2003
    ....
  24. ncbi request reprint Identification of a major locus conferring resistance to powdery mildew (Erysiphe polygoni DC) in mungbean (Vigna radiata L. Wilczek) by QTL analysis
    M E Humphry
    CSIRO Plant Industry, Queensland Bioscience Precinct, St Lucia, Brisbane, Australia
    Genome 46:738-44. 2003
    ..Using these markers, a single locus was identified that explained up to a maximum of 86% of the total variation in the resistance response to the pathogen...
  25. ncbi request reprint Markers associated with stalk number and suckering in sugarcane colocate with tillering and rhizomatousness QTLs in sorghum
    D R Jordan
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Rd, St Lucia, Queensland, 4067, Australia
    Genome 47:988-93. 2004
    ....
  26. ncbi request reprint A combination of AFLP and SSR markers provides extensive map coverage and identification of homo(eo)logous linkage groups in a sugarcane cultivar
    K S Aitken
    Queensland Bioscience Precinct, CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, 4067, Australia
    Theor Appl Genet 110:789-801. 2005
    ..spontaneum (x=8) and S. officinarum (x=10), and illustrates the structural relationship between the genomes of these two species. The discrepancy of coverage between HGs highlights the difficulty in mapping large parts of the genome...
  27. ncbi request reprint A 'Chinese Spring' wheat (Triticum aestivum L.) bacterial artificial chromosome library and its use in the isolation of SSR markers for targeted genome regions
    B Shen
    CSIRO Plant Industry, 306 Carmody Road, St Lucia, Queensland, 4067, Australia
    Theor Appl Genet 111:1489-94. 2005
    ..The potential impacts of these results on marker isolation in wheat and on library screening in general are discussed...
  28. ncbi request reprint Quantitative trait loci identified for sugar related traits in a sugarcane (Saccharum spp.) cultivar x Saccharum officinarum population
    K S Aitken
    Queensland Bioscience Precinct, CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, 4067, Australia
    Theor Appl Genet 112:1306-17. 2006
    ..Models including all the QTLs explained from 37 to 66% of the total phenotypic variation, depending on the trait. The results will be subsequently applied in marker assisted breeding...
  29. ncbi request reprint Construction of a genetic linkage map for Saccharum officinarum incorporating both simplex and duplex markers to increase genome coverage
    K S Aitken
    CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067, Australia
    Genome 50:742-56. 2007
    ..Detection of 28 repulsion linkages that occurred between 6 pairs of LGs located in 4 HGs suggested the occurrence of limited preferential chromosome pairing in this species...
  30. doi request reprint QTL analysis of ergot resistance in sorghum
    D K Parh
    School of Land and Food Sciences, University of Queensland, Brisbane, QLD 4072, Australia
    Theor Appl Genet 117:369-82. 2008
    ..This is the first report of QTL associated with ergot resistance in sorghum. The markers reported herein could be used for marker-assisted selection for this important disease of sorghum...