Research Topics
Genomes and GenesSpecies | C Lynne McIntyreSummaryCountry: Australia Publications
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Detail Information
Publications
Prediction of hybrid performance in grain sorghum using RFLP markersD R Jordan
Department of Primary Industries, Hermitage Research Station, Warwick, Queensland 4370, Australia
Theor Appl Genet 106:559-67. 2003..A model combining phenotypic trait data and parental diversity on particular linkage groups explained 71% of the variation in grain yield and has potential for use in the selection of heterotic hybrids...
Molecular characterization of the waxy locus in sorghumC L McIntyre
CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067 Australia
Genome 51:524-33. 2008..Thus, these indel markers or sequence-based SNP markers can be used to follow waxy alleles in sorghum breeding programs in selected pedigrees...- Linked gene networks involved in nitrogen and carbon metabolism and levels of water-soluble carbohydrate accumulation in wheat stemsC Lynne McIntyre
CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
Funct Integr Genomics 11:585-97. 2011..Our results suggest that the assimilation of nitrogen into amino acids is an important factor that influences the levels of WSC in the stems of field-grown wheat... - Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed conditionsC Lynne McIntyre
CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD 4067, Australia
Theor Appl Genet 120:527-41. 2010.... - Homologues of the maize rust resistance gene Rp1-D are genetically associated with a major rust resistance QTL in sorghumC L McIntyre
CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia
Theor Appl Genet 109:875-83. 2004..These results suggest a conservation of function and gene sequence homology at the Rp1 loci of maize and sorghum and provide a basis for convenient PCR-based screening tools for putative rust resistance alleles in sorghum... - Resistance gene analogues in sugarcane and sorghum and their association with quantitative trait loci for rust resistanceC L McIntyre
CSIRO Plant Industry, Queensland Bioscience Precinct, Brisbane, Australia
Genome 48:391-400. 2005..These results illustrate the value of using RGAs for the identification of markers linked to disease resistance loci and the value of simultaneous mapping in sugarcane and sorghum... - TaMYB13 is a transcriptional activator of fructosyltransferase genes involved in β-2,6-linked fructan synthesis in wheatGang Ping Xue
CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
Plant J 68:857-70. 2011..These data suggest that TaMYB13 and its orthologues are positive regulators for controlling the expression of major fructosyltransferases involved in the fructan synthetic pathway in temperate cereals... - Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profilingRosanne E Casu
CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, Queensland 4067, Australia
Plant Mol Biol 54:503-17. 2004.... 
Molecular dissection of variation in carbohydrate metabolism related to water-soluble carbohydrate accumulation in stems of wheatGang Ping Xue
CSIRO Plant Industry, St Lucia, Brisbane, Queensland 4067, Australia
Plant Physiol 146:441-54. 2008..These data suggest that differential carbon partitioning in the wheat stem is one mechanism that contributes to genotypic variation in WSC accumulation...- TaNF-YC11, one of the light-upregulated NF-YC members in Triticum aestivum, is co-regulated with photosynthesis-related genesTroy J Stephenson
CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD, 4067, Australia
Funct Integr Genomics 10:265-76. 2010..These data indicate that TaNF-YC11 is potentially involved in regulation of photosynthesis-related genes... - Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulationLindsay M Shaw
CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, Australia
Funct Integr Genomics 9:485-98. 2009..These data suggest that the TaDof family may have an important role in light-mediated gene regulation, including involvement in the photosynthetic process... - Use of expression analysis to dissect alterations in carbohydrate metabolism in wheat leaves during drought stressGang Ping Xue
CSIRO Plant Industry, St Lucia, QLD 4067, Australia
Plant Mol Biol 67:197-214. 2008.... - Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivumTroy J Stephenson
CSIRO Plant Industry, St Lucia, QLD, Australia
Plant Mol Biol 65:77-92. 2007..Organ-specific expression and differential response to drought indicate a plant-specific biological role for various members of this transcription factor family... - TaNF-YB3 is involved in the regulation of photosynthesis genes in Triticum aestivumTroy J Stephenson
CSIRO Plant Industry, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia
Funct Integr Genomics 11:327-40. 2011..These results indicate that TaNF-YB3 is involved in the positive regulation of a number of photosynthesis genes in wheat... - Differential gene expression of wheat progeny with contrasting levels of transpiration efficiencyGang Ping Xue
CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD, 4067, Australia
Plant Mol Biol 61:863-81. 2006..These data indicate that some of these TE differentially expressed genes are candidates for investigating processes that underlie the high TE trait or for use as expression quantitative trait loci (eQTLs) for TE... - Overexpression of TaNAC69 leads to enhanced transcript levels of stress up-regulated genes and dehydration tolerance in bread wheatGang Ping Xue
CSIRO Plant Industry, 306 Carmody Road, St Lucia, QLD 4067, Australia
Mol Plant 4:697-712. 2011..These data suggest that TaNAC69 is involved in regulating stress up-regulated genes and wheat adaptation to drought stress... - Dissecting the molecular basis of the contribution of source strength to high fructan accumulation in wheatGang Ping Xue
CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, 4067, Australia
Plant Mol Biol 81:71-92. 2013..These data suggest that high source strength is one of the important genetic factors determining high levels of WSC in wheat... - Identification of a novel sugar transporter homologue strongly expressed in maturing stem vascular tissues of sugarcane by expressed sequence tag and microarray analysisRosanne E Casu
CSIRO Plant Industry, 120 Meiers Road, Indooroopilly, Queensland, 4068, Australia
Plant Mol Biol 52:371-86. 2003..This study demonstrates the utility of genomic approaches using large-scale EST acquisition and microarray hybridization techniques for studies of the developmental regulation of metabolic enzymes and potential transporters in sugarcane... - Associations between DNA markers and resistance to diseases in sugarcane and effects of population substructureXianming Wei
BSES Limited, PMB57, Mackay Mail Centre, Mackay, QLD, 4741, Australia
Theor Appl Genet 114:155-64. 2006..This may be due to special features of past sugarcane breeding programs leading to persistent linkage disequilibrium in modern parental populations... - Construction of a genetic linkage map for Saccharum officinarum incorporating both simplex and duplex markers to increase genome coverageK S Aitken
CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067, Australia
Genome 50:742-56. 2007..Detection of 28 repulsion linkages that occurred between 6 pairs of LGs located in 4 HGs suggested the occurrence of limited preferential chromosome pairing in this species... - Identifications of two different mechanisms for sorghum midge resistance through QTL mappingY Z Tao
QDPI Hermitage Research Station, Warwick, QLD 4370, Australia
Theor Appl Genet 107:116-22. 2003.... - Identification of a major locus conferring resistance to powdery mildew (Erysiphe polygoni DC) in mungbean (Vigna radiata L. Wilczek) by QTL analysisM E Humphry
CSIRO Plant Industry, Queensland Bioscience Precinct, St Lucia, Brisbane, Australia
Genome 46:738-44. 2003..Using these markers, a single locus was identified that explained up to a maximum of 86% of the total variation in the resistance response to the pathogen... - Markers associated with stalk number and suckering in sugarcane colocate with tillering and rhizomatousness QTLs in sorghumD R Jordan
CSIRO Plant Industry, Queensland Bioscience Precinct, 306 Carmody Rd, St. Lucia, Queensland, 4067, Australia
Genome 47:988-93. 2004.... - A combination of AFLP and SSR markers provides extensive map coverage and identification of homo(eo)logous linkage groups in a sugarcane cultivarK S Aitken
Queensland Bioscience Precinct, CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, 4067, Australia
Theor Appl Genet 110:789-801. 2005..spontaneum (x=8) and S. officinarum (x=10), and illustrates the structural relationship between the genomes of these two species. The discrepancy of coverage between HGs highlights the difficulty in mapping large parts of the genome... - A 'Chinese Spring' wheat (Triticum aestivum L.) bacterial artificial chromosome library and its use in the isolation of SSR markers for targeted genome regionsB Shen
CSIRO Plant Industry, 306 Carmody Road, St Lucia, Queensland, 4067, Australia
Theor Appl Genet 111:1489-94. 2005..The potential impacts of these results on marker isolation in wheat and on library screening in general are discussed... - Quantitative trait loci identified for sugar related traits in a sugarcane (Saccharum spp.) cultivar x Saccharum officinarum populationK S Aitken
Queensland Bioscience Precinct, CSIRO Plant Industry, 306 Carmody Rd, St Lucia, QLD, 4067, Australia
Theor Appl Genet 112:1306-17. 2006..Models including all the QTLs explained from 37 to 66% of the total phenotypic variation, depending on the trait. The results will be subsequently applied in marker assisted breeding... - QTL analysis of ergot resistance in sorghumD K Parh
School of Land and Food Sciences, University of Queensland, Brisbane, QLD 4072, Australia
Theor Appl Genet 117:369-82. 2008..This is the first report of QTL associated with ergot resistance in sorghum. The markers reported herein could be used for marker-assisted selection for this important disease of sorghum...