Sankar Subramanian

Summary

Affiliation: Griffith University
Country: Australia

Publications

  1. pmc Time dependency of molecular evolutionary rates? Yes and no
    Sankar Subramanian
    Griffith School of Environment and School of Biomolecular and Physical Sciences, Griffith University, Nathan, Queensland, Australia
    Genome Biol Evol 3:1324-8. 2011
  2. pmc Selective constraints determine the time dependency of molecular rates for human nuclear genomes
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, Queensland, Australia
    Genome Biol Evol 4:1127-32. 2012
  3. pmc Quantifying harmful mutations in human populations
    Sankar Subramanian
    Environmental Futures Centre and Australian Rivers Institute, School of Environment, Griffith University, Nathan, QLD, Australia
    Eur J Hum Genet 20:1320-2. 2012
  4. pmc Significance of population size on the fixation of nonsynonymous mutations in genes under varying levels of selection pressure
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, QLD 4111, Australia
    Genetics 193:995-1002. 2013
  5. pmc The abundance of deleterious polymorphisms in humans
    Sankar Subramanian
    Australian Rivers Institute, Griffith School of Environment, Griffith University, Nathan, Queensland 4111, Australia
    Genetics 190:1579-83. 2012
  6. pmc Next generation sequencing and analysis of a conserved transcriptome of New Zealand's kiwi
    Sankar Subramanian
    Griffith School of Environment and the School of Biomolecular and Physical Sciences, Griffith University, 170 Kessels Road, Nathan, QLD 4111 Australia
    BMC Evol Biol 10:387. 2010
  7. doi request reprint Temporal trails of natural selection in human mitogenomes
    Sankar Subramanian
    Allan Wilson Centre for Molecular Ecology and Evolution, Institute of Molecular Biosciences, Massey University, Auckland, New Zealand
    Mol Biol Evol 26:715-7. 2009
  8. doi request reprint Fixation of deleterious mutations at critical positions in human proteins
    Sankar Subramanian
    Griffith School of Environment, Griffith University, Nathan, Queensland, Australia
    Mol Biol Evol 28:2687-93. 2011
  9. pmc Evidence for a recent origin of penguins
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, Australia
    Biol Lett 9:20130748. 2013
  10. doi request reprint Adélie penguins and temperature changes in Antarctica: a long-term view
    Craig D Millar
    Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, New Zealand
    Integr Zool 7:113-20. 2012

Collaborators

Detail Information

Publications15

  1. pmc Time dependency of molecular evolutionary rates? Yes and no
    Sankar Subramanian
    Griffith School of Environment and School of Biomolecular and Physical Sciences, Griffith University, Nathan, Queensland, Australia
    Genome Biol Evol 3:1324-8. 2011
    ..We also show that the ratio of divergence at nonsynonymous to synonymous sites estimated using intra- and interspecific comparisons vary up to nine times, which corroborates our results independent of calibration times...
  2. pmc Selective constraints determine the time dependency of molecular rates for human nuclear genomes
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, Queensland, Australia
    Genome Biol Evol 4:1127-32. 2012
    ..These results could be useful to researchers aiming to select appropriate genes or genomic regions for estimating evolutionary rates and species or population divergence times...
  3. pmc Quantifying harmful mutations in human populations
    Sankar Subramanian
    Environmental Futures Centre and Australian Rivers Institute, School of Environment, Griffith University, Nathan, QLD, Australia
    Eur J Hum Genet 20:1320-2. 2012
    ..These results could be useful for genome-wide association studies in understanding the relative contributions of rare and common variants in causing human genetic diseases...
  4. pmc Significance of population size on the fixation of nonsynonymous mutations in genes under varying levels of selection pressure
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, QLD 4111, Australia
    Genetics 193:995-1002. 2013
    ....
  5. pmc The abundance of deleterious polymorphisms in humans
    Sankar Subramanian
    Australian Rivers Institute, Griffith School of Environment, Griffith University, Nathan, Queensland 4111, Australia
    Genetics 190:1579-83. 2012
    ..This study reveals that up to 48% of nSNPs specific to a single genome are deleterious in nature, which underscores the abundance of deleterious polymorphisms in humans...
  6. pmc Next generation sequencing and analysis of a conserved transcriptome of New Zealand's kiwi
    Sankar Subramanian
    Griffith School of Environment and the School of Biomolecular and Physical Sciences, Griffith University, 170 Kessels Road, Nathan, QLD 4111 Australia
    BMC Evol Biol 10:387. 2010
    ..We then assembled the conserved protein-coding regions using the chicken proteome as a scaffold...
  7. doi request reprint Temporal trails of natural selection in human mitogenomes
    Sankar Subramanian
    Allan Wilson Centre for Molecular Ecology and Evolution, Institute of Molecular Biosciences, Massey University, Auckland, New Zealand
    Mol Biol Evol 26:715-7. 2009
    ....
  8. doi request reprint Fixation of deleterious mutations at critical positions in human proteins
    Sankar Subramanian
    Griffith School of Environment, Griffith University, Nathan, Queensland, Australia
    Mol Biol Evol 28:2687-93. 2011
    ....
  9. pmc Evidence for a recent origin of penguins
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan, Australia
    Biol Lett 9:20130748. 2013
    ..This overlaps with the sharp decline in Antarctic temperatures that began approximately 12 Ma, suggesting a possible relationship between climate change and penguin evolution. ..
  10. doi request reprint Adélie penguins and temperature changes in Antarctica: a long-term view
    Craig D Millar
    Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, New Zealand
    Integr Zool 7:113-20. 2012
    ..At this time, temperatures were much lower than now. Hence, this species offers unique long-term information, at both the genomic and ecological levels, about how a species has responded to climate change over more than 40 000 years...
  11. ncbi request reprint New developments in ancient genomics
    Craig D Millar
    Allan Wilson Centre for Molecular Ecology and Evolution, School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
    Trends Ecol Evol 23:386-93. 2008
    ..This new wealth of data is also likely to herald investigations into the functional properties of extinct genes and gene complexes and will improve our understanding of the biological basis of extinct phenotypes...
  12. ncbi request reprint High mitogenomic evolutionary rates and time dependency
    Sankar Subramanian
    Griffith School of Environment, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia
    Trends Genet 25:482-6. 2009
    ..The time-independent neutral evolutionary rates reported here would be useful for the study of recent evolutionary events...
  13. ncbi request reprint Second generation DNA sequencing of the mitogenome of the Chinstrap penguin and comparative genomics of Antarctic penguins
    Sankar Subramanian
    Environmental Futures Centre, Griffith University, Nathan Qld, Australia
    Mitochondrial DNA 25:271-2. 2014
    ..The complete mitogenome data will be useful for genetic and evolutionary studies of penguins. ..
  14. ncbi request reprint Rapid molecular evolution in a living fossil
    Jennifer M Hay
    Allan Wilson Centre for Molecular Ecology and Evolution, Institute of Molecular Biosciences, Massey University, Auckland, New Zealand
    Trends Genet 24:106-9. 2008
    ..Our work also suggests that rates of neutral molecular and phenotypic evolution are decoupled...
  15. pmc Nearly neutrality and the evolution of codon usage bias in eukaryotic genomes
    Sankar Subramanian
    Allan Wilson Centre for Molecular Ecology and Evolution, Institute of Molecular Biosciences, Massey University, Auckland, 0632, New Zealand
    Genetics 178:2429-32. 2008
    ..The relevance of these results to the nearly neutral theory of molecular evolution is discussed...