Rod Peakall

Summary

Affiliation: Australian National University
Country: Australia

Publications

  1. doi request reprint Pollinator specificity, floral odour chemistry and the phylogeny of Australian sexually deceptive Chiloglottis orchids: implications for pollinator-driven speciation
    Rod Peakall
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT, Australia
    New Phytol 188:437-50. 2010
  2. pmc GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update
    Rod Peakall
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra ACT 0200, Australia
    Bioinformatics 28:2537-9. 2012
  3. ncbi request reprint Cross-species amplification of soybean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera: implications for the transferability of SSRs in plants
    R Peakall
    Division of Botany and Zoology, Australian National University, Canberra, Australia
    Mol Biol Evol 15:1275-87. 1998
  4. ncbi request reprint Spatial autocorrelation analysis offers new insights into gene flow in the Australian bush rat, Rattus fuscipes
    Rod Peakall
    School of Botany and Zoology, Australian National University, Canberra ACT 0200, Australia
    Evolution 57:1182-95. 2003
  5. ncbi request reprint Comparative genetic study confirms exceptionally low genetic variation in the ancient and endangered relictual conifer, Wollemia nobilis (Araucariaceae)
    Rod Peakall
    School of Botany and Zoology, Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 12:2331-43. 2003
  6. ncbi request reprint The chemistry of sexual deception in an orchid-wasp pollination system
    Florian P Schiestl
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    Science 302:437-8. 2003
  7. doi request reprint A grass molecular identification system for forensic botany: a critical evaluation of the strengths and limitations
    Jodie Ward
    School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia
    J Forensic Sci 54:1254-60. 2009
  8. doi request reprint Developmental validation of a Cannabis sativa STR multiplex system for forensic analysis
    Christopher Howard
    School of Botany and Zoology, The Australian National University, Canberra, Australia
    J Forensic Sci 53:1061-7. 2008
  9. doi request reprint A Cannabis sativa STR genotype database for Australian seizures: forensic applications and limitations
    Christopher Howard
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    J Forensic Sci 54:556-63. 2009
  10. doi request reprint Genetic spatial autocorrelation can readily detect sex-biased dispersal
    Sam C Banks
    The Fenner School of Environment and Society, The Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 21:2092-105. 2012

Collaborators

Detail Information

Publications36

  1. doi request reprint Pollinator specificity, floral odour chemistry and the phylogeny of Australian sexually deceptive Chiloglottis orchids: implications for pollinator-driven speciation
    Rod Peakall
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT, Australia
    New Phytol 188:437-50. 2010
    ....
  2. pmc GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update
    Rod Peakall
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra ACT 0200, Australia
    Bioinformatics 28:2537-9. 2012
    ..Export to more than 30 other data formats is provided. Teaching tutorials and expanded step-by-step output options are included. The comprehensive guide has been fully revised...
  3. ncbi request reprint Cross-species amplification of soybean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera: implications for the transferability of SSRs in plants
    R Peakall
    Division of Botany and Zoology, Australian National University, Canberra, Australia
    Mol Biol Evol 15:1275-87. 1998
    ....
  4. ncbi request reprint Spatial autocorrelation analysis offers new insights into gene flow in the Australian bush rat, Rattus fuscipes
    Rod Peakall
    School of Botany and Zoology, Australian National University, Canberra ACT 0200, Australia
    Evolution 57:1182-95. 2003
    ....
  5. ncbi request reprint Comparative genetic study confirms exceptionally low genetic variation in the ancient and endangered relictual conifer, Wollemia nobilis (Araucariaceae)
    Rod Peakall
    School of Botany and Zoology, Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 12:2331-43. 2003
    ....
  6. ncbi request reprint The chemistry of sexual deception in an orchid-wasp pollination system
    Florian P Schiestl
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    Science 302:437-8. 2003
    ....
  7. doi request reprint A grass molecular identification system for forensic botany: a critical evaluation of the strengths and limitations
    Jodie Ward
    School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia
    J Forensic Sci 54:1254-60. 2009
    ..Our evaluation suggests that the adoption of a system that combines this approach with DNA sequencing could assist the morphological identification of grasses found as forensic evidence...
  8. doi request reprint Developmental validation of a Cannabis sativa STR multiplex system for forensic analysis
    Christopher Howard
    School of Botany and Zoology, The Australian National University, Canberra, Australia
    J Forensic Sci 53:1061-7. 2008
    ..This is the first study following SWGDAM validation guidelines to validate short tandem repeat markers for forensic use in plants...
  9. doi request reprint A Cannabis sativa STR genotype database for Australian seizures: forensic applications and limitations
    Christopher Howard
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    J Forensic Sci 54:556-63. 2009
    ..Notwithstanding the potential intelligence information provided by genetic analysis of C. sativa, our database analysis also reveals some present limitations...
  10. doi request reprint Genetic spatial autocorrelation can readily detect sex-biased dispersal
    Sam C Banks
    The Fenner School of Environment and Society, The Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 21:2092-105. 2012
    ....
  11. doi request reprint Molecular genetic analysis and ecological evidence reveals multiple cryptic species among thynnine wasp pollinators of sexually deceptive orchids
    Kate E Griffiths
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia
    Mol Phylogenet Evol 59:195-205. 2011
    ..The diversity of Neozeleboria may have enabled, rather than constrained, pollinator-driven speciation in these orchids...
  12. ncbi request reprint Discovery of tetrasubstituted pyrazines as semiochemicals in a sexually deceptive orchid
    Björn Bohman
    Research School of Chemistry, The Australian National University, Canberra ACT 0200, Australia
    J Nat Prod 75:1589-94. 2012
    ..Male Catocheilus wasps were responsive to all of these compounds in GC-EAD experiments...
  13. ncbi request reprint A phylogenetic study of pollinator conservatism among sexually deceptive orchids
    Jim G Mant
    School of Botany and Zoology, Australian National University, Canberra, Australian Capital Territory
    Evolution 56:888-98. 2002
    ..Thus, the conservative pattern of pollinator change in sexually deceptive orchids may reflect phylogenetic patterns in the sex pheromones of their pollinators...
  14. doi request reprint Low population genetic differentiation in the Orchidaceae: implications for the diversification of the family
    Ryan D Phillips
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT, 0200, Australia
    Mol Ecol 21:5208-20. 2012
    ..Further research into the diversification of the family needs to unravel the relative roles of biotic and environmental selective pressures in the speciation of orchids...
  15. doi request reprint Using probability modelling and genetic parentage assignment to test the role of local mate availability in mating system variation
    Michaela D J Blyton
    Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 21:572-86. 2012
    ..We show that combining genetic parentage data with probability modelling can facilitate an improved understanding of the complex interactions between behavioural adaptations and demographic dynamics in driving mating system variation...
  16. doi request reprint Synthesis of chiloglottones--semiochemicals from sexually deceptive orchids and their pollinators
    Jacqueline Poldy
    Research School of Chemistry, The Australian National University, Canberra, ACT 0200, Australia
    Org Biomol Chem 7:4296-300. 2009
    ..The synthetic homologues were assessed for their biological activity via electroantennographic detection...
  17. ncbi request reprint A molecular identification system for grasses: a novel technology for forensic botany
    J Ward
    School of Botany and Zoology, Australian National University, Canberra, ACT 0200, Australia
    Forensic Sci Int 152:121-31. 2005
    ..The results confirmed the utility of the PCR assays and the feasibility of developing a robust full-scale usable grass identification system for forensic purposes...
  18. ncbi request reprint Amplified fragment length polymorphism (AFLP) reveals introgression in weedy Onopordum thistles: hybridization and invasion
    P C O'Hanlon
    Division of Botany and Zoology, The Australian National University, Canberra, Australia
    Mol Ecol 8:1239-46. 1999
    ..Such processes appear to have produced more widespread hybridization and introgression in Australian Onopordum than is found in Europe...
  19. pmc Marker-based quantitative genetics in the wild?: the heritability and genetic correlation of chemical defenses in eucalyptus
    R L Andrew
    School of Botany and Zoology, Australian National University, Daley Road, Canberra, ACT 0200, Australia
    Genetics 171:1989-98. 2005
    ..We suggest that this method will prove to be a useful tool in other studies and offer some recommendations for future applications of the method...
  20. ncbi request reprint Cross-species amplification from crop soybean Glycine max provides informative microsatellite markers for the study of inbreeding wild relatives
    K Hempel
    School of Botany and Zoology, Building 116, Australian National University, Acton, ACT 0200, Australia
    Genome 46:382-93. 2003
    ..We interpret these patterns as being a product of selfing in G. clandestina. Our results demonstrate the value of allele sequence knowledge for the most effective use of microsatellites...
  21. doi request reprint High temporal variability in commensal Escherichia coli strain communities of a herbivorous marsupial
    Michaela D J Blyton
    Evolution, Ecology and Genetics, Research School of Biology, Australian National University, Canberra, ACT, 0200, Australia The Fenner School of Environment and Society, Australian National University, Canberra, ACT, 0200, Australia
    Environ Microbiol 15:2162-72. 2013
    ..These findings highlight the importance of temporal variation in the ecology of E. coli, while the methods applied in this study may serve as a foundation for further work in this area. ..
  22. ncbi request reprint Organelle DNA haplotypes reflect crop-use characteristics and geographic origins of Cannabis sativa
    Simon Gilmore
    Centre for Forensic Science, Canberra Institute of Technology, Canberra, ACT, Australia
    Forensic Sci Int 172:179-90. 2007
    ..We discuss the relationship between our haplotype data and taxonomic opinions of cannabis, and the implications of organelle DNA haplotyping to forensic investigations of cannabis...
  23. doi request reprint Functional genotypes are associated with commensal Escherichia coli strain abundance within-host individuals and populations
    Michaela D J Blyton
    Evolution, Ecology and Genetics Research School of Biology, The Australian National University, Canberra, ACT, 0200, Australia The Fenner School of Environment and Society, The Australian National University, Canberra, ACT, 0200, Australia
    Mol Ecol 22:4112-22. 2013
    ..However, a potential link between abundance within the host and excretion rate may also contribute. ..
  24. pmc Mate-searching behaviour of common and rare wasps and the implications for pollen movement of the sexually deceptive orchids they pollinate
    Myles H M Menz
    Kings Park and Botanic Garden, The Botanic Gardens and Parks Authority, Perth, Western Australia, Australia
    PLoS ONE 8:e59111. 2013
    ..We predict that pollen movement will largely be restricted to within populations of Drakaea (<500 m), with few movements between populations (>500 m)...
  25. doi request reprint The absence of sex-biased dispersal in the cooperatively breeding grey-crowned babbler
    Caroline J Blackmore
    The Fenner School of Environment and Society, The Australian National University, Canberra ACT 0200, Australia
    J Anim Ecol 80:69-78. 2011
    ..In fragmented habitat, the dispersal dynamics of this cooperatively breeding species are unlikely to render them particularly vulnerable to genetic consequences such as inbreeding, but may lead to increased group dissolution...
  26. doi request reprint Chloroplast simple sequence repeats (cpSSRs): technical resources and recommendations for expanding cpSSR discovery and applications to a wide array of plant species
    Daniel Ebert
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    Mol Ecol Resour 9:673-90. 2009
    ..v) The reliability of cpSSR length based genetic assays need to be validated in all studies...
  27. doi request reprint A new set of universal de novo sequencing primers for extensive coverage of noncoding chloroplast DNA: new opportunities for phylogenetic studies and cpSSR discovery
    Daniel Ebert
    School of Botany and Zoology, The Australian National University, Canberra ACT 020, 0 Australia
    Mol Ecol Resour 9:777-83. 2009
    ..This primer set will facilitate both phylogenetic studies and rapid discovery of cpSSRs for plants, such as orchids, where there are limited genomic resources...
  28. doi request reprint Chloroplast simple sequence repeat markers for evolutionary studies in the sexually deceptive orchid genus Chiloglottis
    Daniel Ebert
    School of Botany and Zoology, The Australian National University, Canberra ACT 0200, Australia
    Mol Ecol Resour 9:784-9. 2009
    ..Extensive differentiation among the taxa was detected. These cpSSRs markers will enable novel insights into the evolution of this unique genus...
  29. ncbi request reprint Spatial distribution of defense chemicals and markers and the maintenance of chemical variation
    Rose L Andrew
    School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia
    Ecology 88:716-28. 2007
    ..Spatial context should be considered in future studies of plant-herbivore interactions...
  30. ncbi request reprint Phylogeography of pollinator-specific sexually deceptive Chiloglottis taxa (Orchidaceae): evidence for sympatric divergence?
    J Mant
    School of Botany and Zoology, The Australian National University, Canberra, ACT, 0200, Australia
    Mol Ecol 14:3067-76. 2005
    ..The reconstruction of a simple bifurcating pattern of divergence may be confounded by a combination of contemporary population-level processes operating within each taxon, the retention of ancestral polymorphism or intertaxon gene flow...
  31. ncbi request reprint Dispersal, philopatry, and infidelity: dissecting local genetic structure in superb fairy-wrens (Malurus cyaneus)
    M C Double
    School of Botany and Zoology, The Australian National University, Canberra, Australian Capital Territory 0200, Australia
    Evolution 59:625-35. 2005
    ....
  32. ncbi request reprint Social constraint and an absence of sex-biased dispersal drive fine-scale genetic structure in white-winged choughs
    N R Beck
    Fenner School of Environment and Society, Australian National University, Canberra, ACT 0200, Australia
    Mol Ecol 17:4346-58. 2008
    ....
  33. ncbi request reprint Speciation in the Orchidaceae: confronting the challenges
    Rod Peakall
    Mol Ecol 16:2834-7. 2007
    ....
  34. ncbi request reprint Does selection on floral odor promote differentiation among populations and species of the sexually deceptive orchid genus Ophrys?
    Jim Mant
    Geobotanical Institute, ETH Zurich, Zollikerstrasse 107, 8008 Zurich, Switzerland
    Evolution 59:1449-63. 2005
    ....
  35. ncbi request reprint Inbreeding avoidance and the evolution of gender dimorphism in Wurmbea biglandulosa (Colchicaceae)
    Mike Ramsey
    Botany, University of New England, Armidale, New South Wales, Australia
    Evolution 60:529-37. 2006
    ..We propose that present sexual system variation in W. biglandulosa is maintained by high inbreeding depression coupled with differences in selfing rates among monomorphic and dimorphic populations...
  36. ncbi request reprint A heterogeneity test for fine-scale genetic structure
    Peter E Smouse
    Department of Ecology, Evolution and Natural Resources, School of Biological and Environmental Science, Rutgers University, New Brunswick, New Jersey 08901 8551, USA
    Mol Ecol 17:3389-400. 2008
    ..Removal of clonal replicates reduces the autocorrelation for short lags and reverses the sign of the difference between mountain and Piedmont correlograms...