Luis N Marenco

Summary

Affiliation: Yale University
Country: USA

Publications

  1. ncbi AlzPharm: integration of neurodegeneration data using RDF
    Hugo Y K Lam
    Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
    BMC Bioinformatics 8:S4. 2007
  2. ncbi The NIF DISCO Framework: facilitating automated integration of neuroscience content on the web
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    Neuroinformatics 8:101-12. 2010
  3. ncbi The NIF LinkOut broker: a web resource to facilitate federated data integration using NCBI identifiers
    Luis Marenco
    Department of Anesthesiology, Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, 06520 8009, USA
    Neuroinformatics 6:219-27. 2008
  4. ncbi Automated database mediation using ontological metadata mappings
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 16:723-37. 2009
  5. ncbi QIS: A framework for biomedical database federation
    Luis Marenco
    Center for Medical Informatics, Yale University, School of Medicine, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 11:523-34. 2004
  6. ncbi Achieving evolvable Web-database bioscience applications using the EAV/CR framework: recent advances
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 10:444-53. 2003
  7. ncbi Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework
    Luis Marenco
    Department of Anesthesiology, Center for Medical Informatics, Yale University School of Medicine, P O Box 208009, New Haven, CT, 06520 8009, USA
    Neuroinformatics 6:229-39. 2008
  8. ncbi Text mining neuroscience journal articles to populate neuroscience databases
    Chiquito J Crasto
    Center for Medical Informatics, Yale University, New Haven, CT, USA
    Neuroinformatics 1:215-37. 2003
  9. ncbi Semantic SenseLab: Implementing the vision of the Semantic Web in neuroscience
    Matthias Samwald
    Center for Medical Informatics, Yale University School of Medicine, New Haven, CT 06520 8009, USA
    Artif Intell Med 48:21-8. 2010
  10. ncbi Approaches to neuroscience data integration
    Kei Hoi Cheung
    Center for Medical Informatics, Yale University School of Medicine, New Haven, CT 06511, USA
    Brief Bioinform 10:345-53. 2009

Research Grants

  1. Mediated Integration of Neuroscience Resources
    Luis Marenco; Fiscal Year: 2007

Detail Information

Publications17

  1. ncbi AlzPharm: integration of neurodegeneration data using RDF
    Hugo Y K Lam
    Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
    BMC Bioinformatics 8:S4. 2007
    ....
  2. ncbi The NIF DISCO Framework: facilitating automated integration of neuroscience content on the web
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    Neuroinformatics 8:101-12. 2010
    ..Although DISCO is used by NIF to facilitate neuroscience data integration, its capabilities have general applicability to other areas of research...
  3. ncbi The NIF LinkOut broker: a web resource to facilitate federated data integration using NCBI identifiers
    Luis Marenco
    Department of Anesthesiology, Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, 06520 8009, USA
    Neuroinformatics 6:219-27. 2008
    ..This approach can allow other resources (in addition to the NCBI Entrez) to LinkOut to related neuroscience information. The paper describes the current NLB system and discusses certain design issues that arose during its implementation...
  4. ncbi Automated database mediation using ontological metadata mappings
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 16:723-37. 2009
    ..To devise an automated approach for integrating federated database information using database ontologies constructed from their extended metadata...
  5. ncbi QIS: A framework for biomedical database federation
    Luis Marenco
    Center for Medical Informatics, Yale University, School of Medicine, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 11:523-34. 2004
    ..Metadata version difference determination coupled with decomposition of stored queries is used as the basis for partial query recovery when the schema of data sources alters...
  6. ncbi Achieving evolvable Web-database bioscience applications using the EAV/CR framework: recent advances
    Luis Marenco
    Center for Medical Informatics, Yale University School of Medicine, PO Box 208009, New Haven, CT 06520 8009, USA
    J Am Med Inform Assoc 10:444-53. 2003
    ....
  7. ncbi Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework
    Luis Marenco
    Department of Anesthesiology, Center for Medical Informatics, Yale University School of Medicine, P O Box 208009, New Haven, CT, 06520 8009, USA
    Neuroinformatics 6:229-39. 2008
    ..The paper concludes by discussing certain lessons learned in the development of the current version of the interface...
  8. ncbi Text mining neuroscience journal articles to populate neuroscience databases
    Chiquito J Crasto
    Center for Medical Informatics, Yale University, New Haven, CT, USA
    Neuroinformatics 1:215-37. 2003
    ..Software that uses the NeuroText approach can facilitate the creation of curated, special-interest, bibliography databases...
  9. ncbi Semantic SenseLab: Implementing the vision of the Semantic Web in neuroscience
    Matthias Samwald
    Center for Medical Informatics, Yale University School of Medicine, New Haven, CT 06520 8009, USA
    Artif Intell Med 48:21-8. 2010
    ..This paper describes the use of the Web Ontology Language (OWL) and other Semantic Web technologies for the representation and integration of molecular-level data provided by several of SenseLab suite of neuroscience databases...
  10. ncbi Approaches to neuroscience data integration
    Kei Hoi Cheung
    Center for Medical Informatics, Yale University School of Medicine, New Haven, CT 06511, USA
    Brief Bioinform 10:345-53. 2009
    ..The facets are also used to define the structure of the query results...
  11. ncbi Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences
    Chiquito Crasto
    Center for Medical Informatics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 05611, USA
    Nucleic Acids Res 30:354-60. 2002
    ..Three population methods: batch, automatic and semi-automatic population are discussed. The data is imported into the database using extensible markup language (XML)...
  12. ncbi Dynamic tables: an architecture for managing evolving, heterogeneous biomedical data in relational database management systems
    John Corwin
    Department of Computer Science, Yale University, P O Box 208285, New Haven, CT 06520 8285, USA
    J Am Med Inform Assoc 14:86-93. 2007
    ..The performance results show that their architecture is a promising technique for storing and processing many types of data that are not handled well by the other two semantic data models...
  13. ncbi ResourceLog: an embeddable tool for dynamically monitoring the usage of web-based bioscience resources
    Nian Liu
    Center for Medical Informatics, Yale University School of Medicine, 300 George Street, Suite 501, New Haven, CT 06511, USA
    J Am Med Inform Assoc 13:432-7. 2006
    ..ResourceLog provides a robust and useful tool to aid system evaluation of a resource-driven Web application, with a focus on determining the effectiveness of data sharing in the field and with the general public...
  14. ncbi Informatics approaches to functional MRI odor mapping of the rodent olfactory bulb: OdorMapBuilder and OdorMapDB
    Nian Liu
    Center for Medical Informatics, Yale University School of Medicine, New Haven, CT 06520, USA
    Neuroinformatics 2:3-18. 2004
    ..Both OdorMapBuilder and OdorMapDB should serve as useful tools and resources for the field and help facilitate experimental research in understanding the olfactory system and the mechanism for smell perception...
  15. ncbi Database architectures for neuroscience applications
    Prakash Nadkarni
    Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA
    Methods Mol Biol 401:37-52. 2007
    ..Recording validation constraints on individual items, as well as information on how they are to be presented, facilitates automatic or semi-automatic generation of robust user interfaces...
  16. ncbi Interoperability across neuroscience databases
    Luis Marenco
    Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA
    Methods Mol Biol 401:23-36. 2007
    ..We also describe current data sharing and integration mechanisms in genera. We conclude with data integration in bioscience and present approaches on neuroscience data sharing...
  17. ncbi SenseLab: new developments in disseminating neuroscience information
    Chiquito J Crasto
    Department of Genetics, University of Alabama at Birmingham, Birmingham, Alabama, USA
    Brief Bioinform 8:150-62. 2007
    ..We describe here: the new features for each database, the evolution of SenseLab's unifying database architecture and instances of SenseLab database interoperation with other neuroscience online resources...

Research Grants3

  1. Mediated Integration of Neuroscience Resources
    Luis Marenco; Fiscal Year: 2007
    ....