Helen L Johnson

Summary

Affiliation: University of Colorado Health Sciences Center
Country: USA

Publications

  1. ncbi Corpus refactoring: a feasibility study
    Helen L Johnson
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, CO, USA
    J Biomed Discov Collab 2:4. 2007
  2. ncbi OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
    Lawrence Hunter
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA
    BMC Bioinformatics 9:78. 2008
  3. ncbi Concept recognition for extracting protein interaction relations from biomedical text
    William A Baumgartner
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, Colorado 80045, USA
    Genome Biol 9:S9. 2008
  4. ncbi Exploring species-based strategies for gene normalization
    Karin Verspoor
    Center for Computational Pharmacology, University of Colorado Denver, Aurora, CO 80045, USA
    IEEE/ACM Trans Comput Biol Bioinform 7:462-71. 2010

Collaborators

Detail Information

Publications4

  1. ncbi Corpus refactoring: a feasibility study
    Helen L Johnson
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, CO, USA
    J Biomed Discov Collab 2:4. 2007
    ..We tracked the total time expended and the success rates of the automated steps...
  2. ncbi OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
    Lawrence Hunter
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA
    BMC Bioinformatics 9:78. 2008
    ....
  3. ncbi Concept recognition for extracting protein interaction relations from biomedical text
    William A Baumgartner
    Center for Computational Pharmacology, University of Colorado School of Medicine, Aurora, Colorado 80045, USA
    Genome Biol 9:S9. 2008
    ..The BioCreative II tasks discussed in this special issue have provided a unique opportunity to demonstrate the effectiveness of concept recognition in the field of biomedical language processing...
  4. ncbi Exploring species-based strategies for gene normalization
    Karin Verspoor
    Center for Computational Pharmacology, University of Colorado Denver, Aurora, CO 80045, USA
    IEEE/ACM Trans Comput Biol Bioinform 7:462-71. 2010
    ..5 tasks...