W Florian Fricke

Summary

Affiliation: University of Maryland
Country: USA

Publications

  1. ncbi Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA
    J Bacteriol 193:3556-68. 2011
  2. ncbi Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, 801 W Baltimore St, Baltimore, MD 21201, USA
    Appl Environ Microbiol 75:5963-71. 2009
  3. ncbi Comparative genomics of the IncA/C multidrug resistance plasmid family
    W Florian Fricke
    Institute for Genome Sciences IGS, University of Maryland School of Medicine, Baltimore, MD 21201, USA
    J Bacteriol 191:4750-7. 2009
  4. ncbi Resources and costs for microbial sequence analysis evaluated using virtual machines and cloud computing
    Samuel V Angiuoli
    Institute for Genome Sciences, University of Maryland Baltimore, Baltimore, Maryland, United States of America
    PLoS ONE 6:e26624. 2011
  5. ncbi The role of genomics in the identification, prediction, and prevention of biological threats
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, USA
    PLoS Biol 7:e1000217. 2009
  6. ncbi CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing
    Samuel V Angiuoli
    Institute for Genome Sciences IGS, University of Maryland School of Medicine, Baltimore, Maryland, USA
    BMC Bioinformatics 12:356. 2011
  7. ncbi Proof of concept of microbiome-metabolome analysis and delayed gluten exposure on celiac disease autoimmunity in genetically at-risk infants
    Maria Sellitto
    Mucosal Biology Research Center and Department of Pediatrics, University of Maryland School of Medicine, Baltimore, Maryland, United States of America
    PLoS ONE 7:e33387. 2012
  8. ncbi Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA
    J Bacteriol 190:6779-94. 2008
  9. ncbi Genome sequence of Ruegeria sp. strain KLH11, an N-acylhomoserine lactone-producing bacterium isolated from the marine sponge Mycale laxissima
    Jindong Zan
    Institute of Marine and Environmental Technology, University of Maryland Center for Environmental Science, Columbus Center Suite 236, 701 East Pratt Street, Baltimore, MD 21202, USA
    J Bacteriol 193:5011-2. 2011

Collaborators

Detail Information

Publications9

  1. ncbi Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA
    J Bacteriol 193:3556-68. 2011
    ..CRISPR analysis could therefore be critical in assessing the evolutionary potential of S. enterica sublineages and aid in the prediction and prevention of future S. enterica outbreaks...
  2. ncbi Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, 801 W Baltimore St, Baltimore, MD 21201, USA
    Appl Environ Microbiol 75:5963-71. 2009
    ....
  3. ncbi Comparative genomics of the IncA/C multidrug resistance plasmid family
    W Florian Fricke
    Institute for Genome Sciences IGS, University of Maryland School of Medicine, Baltimore, MD 21201, USA
    J Bacteriol 191:4750-7. 2009
    ....
  4. ncbi Resources and costs for microbial sequence analysis evaluated using virtual machines and cloud computing
    Samuel V Angiuoli
    Institute for Genome Sciences, University of Maryland Baltimore, Baltimore, Maryland, United States of America
    PLoS ONE 6:e26624. 2011
    ..Cloud computing services have been discussed as potential new bioinformatics support systems but have not been evaluated thoroughly...
  5. ncbi The role of genomics in the identification, prediction, and prevention of biological threats
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, USA
    PLoS Biol 7:e1000217. 2009
    ....
  6. ncbi CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing
    Samuel V Angiuoli
    Institute for Genome Sciences IGS, University of Maryland School of Medicine, Baltimore, Maryland, USA
    BMC Bioinformatics 12:356. 2011
    ..Cloud computing platforms provide on-demand access to computing infrastructure over the Internet and can be used in combination with custom built virtual machines to distribute pre-packaged with pre-configured software...
  7. ncbi Proof of concept of microbiome-metabolome analysis and delayed gluten exposure on celiac disease autoimmunity in genetically at-risk infants
    Maria Sellitto
    Mucosal Biology Research Center and Department of Pediatrics, University of Maryland School of Medicine, Baltimore, Maryland, United States of America
    PLoS ONE 7:e33387. 2012
    ..This study constitutes a definite proof-of-principle that these combined genomic and metabolomic approaches will be key to deciphering the role of the gut microbiota on CD onset...
  8. ncbi Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5
    W Florian Fricke
    Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA
    J Bacteriol 190:6779-94. 2008
    ..The association of antimicrobial resistance with APEC virulence genes on pSMS35_130 highlights the risk of promoting the spread of virulence through the extensive use of antibiotics...
  9. ncbi Genome sequence of Ruegeria sp. strain KLH11, an N-acylhomoserine lactone-producing bacterium isolated from the marine sponge Mycale laxissima
    Jindong Zan
    Institute of Marine and Environmental Technology, University of Maryland Center for Environmental Science, Columbus Center Suite 236, 701 East Pratt Street, Baltimore, MD 21202, USA
    J Bacteriol 193:5011-2. 2011
    ..The genome sequence provides insights into the genetic potential of KLH11 to maintain complex QS systems, and this is the first genome report of a cultivated symbiont from a marine sponge...