Anthony D Aragon

Summary

Affiliation: University of New Mexico
Country: USA

Publications

  1. ncbi Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 15:5295-305. 2004
  2. ncbi Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data
    Jerilyn A Timlin
    Sandia National Laboratories, Albuquerque, NM 87185, USA
    BMC Genomics 6:72. 2005
  3. ncbi Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Genome Biol 7:R9. 2006
  4. ncbi Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 19:1271-80. 2008
  5. ncbi An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    J Microbiol Methods 65:357-60. 2006
  6. ncbi Differential transcriptomic responses of Biomphalaria glabrata (Gastropoda, Mollusca) to bacteria and metazoan parasites, Schistosoma mansoni and Echinostoma paraensei (Digenea, Platyhelminthes)
    Coen M Adema
    Center for Evolutionary and Theoretical Immunology, Biology MSC03 2020, 1 University of New Mexico, Albuquerque, NM 87131, USA
    Mol Immunol 47:849-60. 2010
  7. ncbi Microarray based analysis of temperature and oxidative stress induced messenger RNA in Schistosoma mansoni
    Anthony D Aragon
    Department of Biology, 216 Castetter Hall, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 162:134-41. 2008
  8. ncbi A hidden-state Markov model for cell population deconvolution
    Sushmita Roy
    Department of Computer Science, University of New Mexico, Albuquerque, NM 87131, USA
    J Comput Biol 13:1749-74. 2006
  9. ncbi Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures
    Chris Allen
    Department of Biology, Health Sciences Center, University of New Mexico, Albuquerque, NM 87131, USA
    J Cell Biol 174:89-100. 2006
  10. ncbi Towards an understanding of the mechanism of action of praziquantel
    Anthony D Aragon
    Center for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 164:57-65. 2009

Collaborators

Detail Information

Publications11

  1. ncbi Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 15:5295-305. 2004
    ....
  2. ncbi Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data
    Jerilyn A Timlin
    Sandia National Laboratories, Albuquerque, NM 87185, USA
    BMC Genomics 6:72. 2005
    ....
  3. ncbi Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Genome Biol 7:R9. 2006
    ..We asked whether cells in stationary phase cultures respond to additional stress at the level of transcript abundance...
  4. ncbi Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 19:1271-80. 2008
    ..These studies are relevant to chronological aging, cell cycle, and genome evolution, and they provide insight into complex responses that even simple organisms have to starvation...
  5. ncbi An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    J Microbiol Methods 65:357-60. 2006
    ..Correlation between biological replicate time courses measured by microarrays was extremely high. The sampler enables sampling at intervals within the range of many important biological processes...
  6. ncbi Differential transcriptomic responses of Biomphalaria glabrata (Gastropoda, Mollusca) to bacteria and metazoan parasites, Schistosoma mansoni and Echinostoma paraensei (Digenea, Platyhelminthes)
    Coen M Adema
    Center for Evolutionary and Theoretical Immunology, Biology MSC03 2020, 1 University of New Mexico, Albuquerque, NM 87131, USA
    Mol Immunol 47:849-60. 2010
    ..Clearly, the immune defenses of B. glabrata distinguish and respond differently to various immune challenges...
  7. ncbi Microarray based analysis of temperature and oxidative stress induced messenger RNA in Schistosoma mansoni
    Anthony D Aragon
    Department of Biology, 216 Castetter Hall, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 162:134-41. 2008
    ..Seventy-two elements were common to both stressors and could potentially be exploited in the development of novel anti-schistosomal therapeutics...
  8. ncbi A hidden-state Markov model for cell population deconvolution
    Sushmita Roy
    Department of Computer Science, University of New Mexico, Albuquerque, NM 87131, USA
    J Comput Biol 13:1749-74. 2006
    ....
  9. ncbi Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures
    Chris Allen
    Department of Biology, Health Sciences Center, University of New Mexico, Albuquerque, NM 87131, USA
    J Cell Biol 174:89-100. 2006
    ..The ability to isolate both quiescent and nonquiescent yeast cells from SP cultures provides a novel, tractable experimental system for studies of quiescence, chronological and replicative aging, apoptosis, and the cell cycle...
  10. ncbi Towards an understanding of the mechanism of action of praziquantel
    Anthony D Aragon
    Center for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 164:57-65. 2009
    ..mansoni PR-1. Annotation of genes differentially regulated by PZQ exposure suggests that schistosomes may undergo a transcriptomic response similar to that observed during oxidative stress...
  11. ncbi Identification and removal of contaminating fluorescence from commercial and in-house printed DNA microarrays
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Nucleic Acids Res 31:e18. 2003
    ....