Amir Abdollahi

Summary

Affiliation: Tufts University
Country: USA

Publications

  1. ncbi Organ-, inflammation- and cancer specific transcriptional fingerprints of pancreatic and hepatic stellate cells
    Mert Erkan
    Department of General Surgery, Technische Universitat Munchen, Munich, Germany
    Mol Cancer 9:88. 2010
  2. ncbi TableButler - a Windows based tool for processing large data tables generated with high-throughput methods
    Christian Schwager
    Department of Radiation Oncology, German Cancer Research Center DKFZ and University of Heidelberg Medical School, Heidelberg, Germany
    BMC Bioinformatics 10:235. 2009
  3. ncbi Evading tumor evasion: current concepts and perspectives of anti-angiogenic cancer therapy
    Amir Abdollahi
    Center of Cancer Systems Biology, Dept of Medicine, St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, MA 02135, USA
    Drug Resist Updat 13:16-28. 2010
  4. ncbi Consensus transcriptome signature of perineural invasion in pancreatic carcinoma
    Ivane Abiatari
    Department of General Surgery, Technische Universitat Munchen, Ismaningerstrasse 22, Munich, Germany
    Mol Cancer Ther 8:1494-504. 2009
  5. ncbi Tumor growth and angiogenesis are dependent on the presence of immature dendritic cells
    Ofer Fainaru
    Vascular Biology Program and Department of Surgery, Childrens Hospital Boston, Harvard Medical School, Boston, Massachusetts 02115, USA
    FASEB J 24:1411-8. 2010
  6. ncbi Whole blood transcriptomics in cardiac surgery identifies a gene regulatory network connecting ischemia reperfusion with systemic inflammation
    Orfeas Liangos
    The Kidney and Dialysis Research Laboratory, Division of Nephrology, Caritas St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, Massachusetts, United States of America
    PLoS ONE 5:e13658. 2010
  7. ncbi Transcriptional switch of dormant tumors to fast-growing angiogenic phenotype
    Nava Almog
    Center of Cancer Systems Biology, Caritas St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, Massachusetts 02135, USA
    Cancer Res 69:836-44. 2009
  8. ncbi Intercellular communication by exchange of cytoplasmic material via tunneling nano-tube like structures in primary human renal epithelial cells
    Sophie Domhan
    Department of Medicine, Center of Cancer Systems Biology, St Elizabeth s Medical Center, Tufts University, Boston, Massachusetts, United States of America
    PLoS ONE 6:e21283. 2011

Collaborators

Detail Information

Publications8

  1. ncbi Organ-, inflammation- and cancer specific transcriptional fingerprints of pancreatic and hepatic stellate cells
    Mert Erkan
    Department of General Surgery, Technische Universitat Munchen, Munich, Germany
    Mol Cancer 9:88. 2010
    ..To identify organ- and disease-specific stellate cell transcriptional fingerprints, we employed genome-wide transcriptional analysis of primary human PSC and HSC isolated from patients with chronic inflammation or cancer...
  2. ncbi TableButler - a Windows based tool for processing large data tables generated with high-throughput methods
    Christian Schwager
    Department of Radiation Oncology, German Cancer Research Center DKFZ and University of Heidelberg Medical School, Heidelberg, Germany
    BMC Bioinformatics 10:235. 2009
    ..in case of gene expression analysis). Gene annotations as well as information concerning the samples analyzed may be appended, renewed or extended. Often additional data values shall be computed or certain features must be filtered out...
  3. ncbi Evading tumor evasion: current concepts and perspectives of anti-angiogenic cancer therapy
    Amir Abdollahi
    Center of Cancer Systems Biology, Dept of Medicine, St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, MA 02135, USA
    Drug Resist Updat 13:16-28. 2010
    ....
  4. ncbi Consensus transcriptome signature of perineural invasion in pancreatic carcinoma
    Ivane Abiatari
    Department of General Surgery, Technische Universitat Munchen, Ismaningerstrasse 22, Munich, Germany
    Mol Cancer Ther 8:1494-504. 2009
    ..The established nerve invasion model and the consensus signature of perineural invasion could be instrumental in the identification of novel therapeutic targets of pancreatic cancer as exemplified by KIF14 and ARHGDIbeta...
  5. ncbi Tumor growth and angiogenesis are dependent on the presence of immature dendritic cells
    Ofer Fainaru
    Vascular Biology Program and Department of Surgery, Childrens Hospital Boston, Harvard Medical School, Boston, Massachusetts 02115, USA
    FASEB J 24:1411-8. 2010
    ..Thus, cancer immunotherapies that promote DC maturation may act by both augmenting the host immune response to the tumor and by suppressing tumor angiogenesis...
  6. ncbi Whole blood transcriptomics in cardiac surgery identifies a gene regulatory network connecting ischemia reperfusion with systemic inflammation
    Orfeas Liangos
    The Kidney and Dialysis Research Laboratory, Division of Nephrology, Caritas St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, Massachusetts, United States of America
    PLoS ONE 5:e13658. 2010
    ..To identify the molecular mechanisms underlying CS/CPB-induced pathophysiology we employed an integrative systems biology approach using the whole blood transcriptome as the sentinel organ...
  7. ncbi Transcriptional switch of dormant tumors to fast-growing angiogenic phenotype
    Nava Almog
    Center of Cancer Systems Biology, Caritas St Elizabeth s Medical Center, Tufts University School of Medicine, Boston, Massachusetts 02135, USA
    Cancer Res 69:836-44. 2009
    ..These data will be instrumental in identifying novel early cancer biomarkers and could provide a rationale for development of dormancy-promoting tumor therapy strategies...
  8. ncbi Intercellular communication by exchange of cytoplasmic material via tunneling nano-tube like structures in primary human renal epithelial cells
    Sophie Domhan
    Department of Medicine, Center of Cancer Systems Biology, St Elizabeth s Medical Center, Tufts University, Boston, Massachusetts, United States of America
    PLoS ONE 6:e21283. 2011
    ..Our data indicates an unexpected dynamic of intercellular communication between RPTEC by exchange of cytosolic material, which may play an important role in renal physiology...