Eduard D Akhunov

Summary

Affiliation: Kansas State University
Country: USA

Publications

  1. ncbi Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome
    Cyrille Saintenac
    Throckmorton Plant Sciences Center, Kansas State University, Manhattan, KS 66506, USA
    Genome Biol 12:R88. 2011
  2. ncbi Delineating the structural, functional and evolutionary relationships of sucrose phosphate synthase gene family II in wheat and related grasses
    Shailendra Sharma
    Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
    BMC Plant Biol 10:134. 2010
  3. ncbi Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence
    Dario Cantu
    Department of Plant Sciences, University of California Davis, USA
    BMC Genomics 12:492. 2011
  4. ncbi Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)
    Shiaoman Chao
    USDA ARS Genotyping Laboratory, Biosciences Research Laboratory, Fargo, ND, USA
    BMC Genomics 11:727. 2010
  5. ncbi Single nucleotide polymorphism genotyping in polyploid wheat with the Illumina GoldenGate assay
    Eduard Akhunov
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Theor Appl Genet 119:507-17. 2009
  6. ncbi Homoeolog-specific transcriptional bias in allopolyploid wheat
    Alina R Akhunova
    Department of Plant Pathology, Throckmorton Plant Sciences Center, Kansas State University, Manhattan, KS 66506, USA
    BMC Genomics 11:505. 2010
  7. ncbi Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat
    Jan Dvorak
    Department of Plant Sciences, University of California, Davis, USA
    Mol Biol Evol 23:1386-96. 2006
  8. ncbi Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates
    Eduard D Akhunov
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Proc Natl Acad Sci U S A 100:10836-41. 2003
  9. ncbi Mechanisms and rates of birth and death of dispersed duplicated genes during the evolution of a multigene family in diploid and tetraploid wheats
    Eduard D Akhunov
    Department of Plant Sciences, University of California, Davis, USA
    Mol Biol Evol 24:539-50. 2007
  10. ncbi Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance
    Jan Dvorak
    Department of Plant Sciences, University of California, Davis, California 95616, USA
    Genetics 171:323-32. 2005

Collaborators

Detail Information

Publications12

  1. ncbi Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome
    Cyrille Saintenac
    Throckmorton Plant Sciences Center, Kansas State University, Manhattan, KS 66506, USA
    Genome Biol 12:R88. 2011
    ..To gain a better understanding of the nature and extent of variation in functionally relevant regions of a polyploid genome, we developed a sequence capture assay to compare exonic sequences of allotetraploid wheat accessions...
  2. ncbi Delineating the structural, functional and evolutionary relationships of sucrose phosphate synthase gene family II in wheat and related grasses
    Shailendra Sharma
    Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
    BMC Plant Biol 10:134. 2010
    ..A set of homoeologue-specific primers was developed in order to permit both the detection of sequence variation, and the dissection of the individual contribution of each homoeologue to the global expression of SPSII...
  3. ncbi Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence
    Dario Cantu
    Department of Plant Sciences, University of California Davis, USA
    BMC Genomics 12:492. 2011
    ..abstract:..
  4. ncbi Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)
    Shiaoman Chao
    USDA ARS Genotyping Laboratory, Biosciences Research Laboratory, Fargo, ND, USA
    BMC Genomics 11:727. 2010
    ..Here, we used a genome-wide set of 1536 SNPs to study linkage disequilibrium (LD) and population structure in a panel of 478 spring and winter wheat cultivars (Triticum aestivum) from 17 populations across the United States and Mexico...
  5. ncbi Single nucleotide polymorphism genotyping in polyploid wheat with the Illumina GoldenGate assay
    Eduard Akhunov
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Theor Appl Genet 119:507-17. 2009
    ....
  6. ncbi Homoeolog-specific transcriptional bias in allopolyploid wheat
    Alina R Akhunova
    Department of Plant Pathology, Throckmorton Plant Sciences Center, Kansas State University, Manhattan, KS 66506, USA
    BMC Genomics 11:505. 2010
    ..tauschii...
  7. ncbi Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat
    Jan Dvorak
    Department of Plant Sciences, University of California, Davis, USA
    Mol Biol Evol 23:1386-96. 2006
    ..A cline of the 2 haplotype frequencies exists across Euro-Asia in T. aestivum. It is suggested that T. aestivum in eastern Asia conserved the gene pool of the original T. aestivum more than wheat elsewhere...
  8. ncbi Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates
    Eduard D Akhunov
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Proc Natl Acad Sci U S A 100:10836-41. 2003
    ..Synteny perturbations were characterized in 31 paralogous sets of loci with perturbed synteny. Both insertions and deletions of loci were detected and both preferentially occurred in high recombination regions of chromosomes...
  9. ncbi Mechanisms and rates of birth and death of dispersed duplicated genes during the evolution of a multigene family in diploid and tetraploid wheats
    Eduard D Akhunov
    Department of Plant Sciences, University of California, Davis, USA
    Mol Biol Evol 24:539-50. 2007
    ..The evolution of the ALP family shows that repeated elements facilitate both gene duplication and expression of duplicated genes and highlights their importance for the evolution of gene repertoire in large plant genomes...
  10. ncbi Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance
    Jan Dvorak
    Department of Plant Sciences, University of California, Davis, California 95616, USA
    Genetics 171:323-32. 2005
    ..The significance of these findings for genome evolution at the diploid and polyploid level is discussed...
  11. ncbi Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes
    Eduard D Akhunov
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    BMC Genomics 11:702. 2010
    ..dicoccoides, genomes AABB) from the putative site of wheat domestication in Turkey. Data are used to assess the distribution of diversity among and within wheat genomes and to develop a panel of SNP markers for polyploid wheat...
  12. ncbi The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms
    Eduard D Akhunov
    Department of Agronomy and Range Science, University of California, Davis, California 95616, USA
    Genome Res 13:753-63. 2003
    ....