Baris E Suzek

Summary

Affiliation: Georgetown University
Country: USA

Publications

  1. ncbi Infrastructure for the life sciences: design and implementation of the UniProt website
    Eric Jain
    Swiss Prot group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211 Geneva 4, Switzerland
    BMC Bioinformatics 10:136. 2009
  2. ncbi UniRef: comprehensive and non-redundant UniProt reference clusters
    Baris E Suzek
    Protein Information Resource, Department of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC 20007, USA
    Bioinformatics 23:1282-8. 2007
  3. ncbi PIRSF: family classification system at the Protein Information Resource
    Cathy H Wu
    Department of Biochemistry and Molecular Biology, Georgetown University Medical Center, 3900 Reservoir Road, NW, Box 571414, Washington, DC 20057 1414, USA
    Nucleic Acids Res 32:D112-4. 2004
  4. ncbi The Protein Information Resource
    Cathy H Wu
    Department of Biochemistry and Molecular Biology, Georgetown University Medical Center, 3900 Reservoir Road, NW, Box 571414, Washington, DC 20057 1414, USA
    Nucleic Acids Res 31:345-7. 2003
  5. ncbi The Protein Information Resource: an integrated public resource of functional annotation of proteins
    Cathy H Wu
    National Biomedical Research Foundation, Georgetown University Medical Center, 3900 Reservoir Road, NW, Washington, DC 20007, USA
    Nucleic Acids Res 30:35-7. 2002

Collaborators

Detail Information

Publications5

  1. ncbi Infrastructure for the life sciences: design and implementation of the UniProt website
    Eric Jain
    Swiss Prot group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211 Geneva 4, Switzerland
    BMC Bioinformatics 10:136. 2009
    ..Following several years of intense development and a year of public beta testing, the http://www.uniprot.org domain was switched to the newly developed site described in this paper in July 2008...
  2. ncbi UniRef: comprehensive and non-redundant UniProt reference clusters
    Baris E Suzek
    Protein Information Resource, Department of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC 20007, USA
    Bioinformatics 23:1282-8. 2007
    ..Clustering of protein sequence space based on sequence similarity helps organize all sequences into manageable datasets and reduces sampling bias and overrepresentation of sequences...
  3. ncbi PIRSF: family classification system at the Protein Information Resource
    Cathy H Wu
    Department of Biochemistry and Molecular Biology, Georgetown University Medical Center, 3900 Reservoir Road, NW, Box 571414, Washington, DC 20057 1414, USA
    Nucleic Acids Res 32:D112-4. 2004
    ..PIRSF can be utilized to analyze phylogenetic profiles, to reveal functional convergence and divergence, and to identify interesting relationships between homeomorphic families, domains and structural classes...
  4. ncbi The Protein Information Resource
    Cathy H Wu
    Department of Biochemistry and Molecular Biology, Georgetown University Medical Center, 3900 Reservoir Road, NW, Box 571414, Washington, DC 20057 1414, USA
    Nucleic Acids Res 31:345-7. 2003
    ..The FTP site provides free download for PSD and NREF biweekly releases and auxiliary databases and files...
  5. ncbi The Protein Information Resource: an integrated public resource of functional annotation of proteins
    Cathy H Wu
    National Biomedical Research Foundation, Georgetown University Medical Center, 3900 Reservoir Road, NW, Washington, DC 20007, USA
    Nucleic Acids Res 30:35-7. 2002
    ..The PIR databases and other files are also available by FTP (ftp://nbrfa.georgetown.edu/pir_databases)...