Research Topics
Species | Jonathan BackerSummaryAffiliation: Albert Einstein College of Medicine Country: USA Publications
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Publications
New methods for capturing the mystery lipid, PtdIns5PJonathan M Backer
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
Biochem J 428:e1-2. 2010..In this issue of the Biochemical Journal, Sarkes and Rameh describe a novel HPLC-based approach which makes possible an analysis of the subcellular distribution of PtdIns5P and other phosphoinositides...
The regulation and function of Class III PI3Ks: novel roles for Vps34Jonathan M Backer
Department of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
Biochem J 410:1-17. 2008..Thus Class III PI3Ks are implicated in the regulation of both autophagy and, through the mTOR pathway, protein synthesis, and thus contribute to the integration of cellular responses to changing nutritional status...
Cdc42 is required for EGF-stimulated protrusion and motility in MTLn3 carcinoma cellsMirvat El-Sibai
Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
J Cell Sci 120:3465-74. 2007..Our data suggest that Cdc42 activation is crucial for the regulation of actin polymerization in carcinoma cells, and required for both EGF-stimulated protrusion and cell motility independently of effects on Rac...
RhoA/ROCK-mediated switching between Cdc42- and Rac1-dependent protrusion in MTLn3 carcinoma cellsMirvat El-Sibai
Department of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
Exp Cell Res 314:1540-52. 2008..These data describe a novel role for Rho in coordinating signaling by Rac and Cdc42...
The distinct roles of Ras and Rac in PI 3-kinase-dependent protrusion during EGF-stimulated cell migrationShu Chin Yip
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
J Cell Sci 120:3138-46. 2007..These data suggest an unappreciated role for Ras during protrusion, and a crucial role for Rac in the stabilization of protrusions required for cell motility...
Local signaling by the EGF receptorStephan J Kempiak
Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, New York, NY 10461, USA
J Cell Biol 162:781-7. 2003..Thus, we find differing spatial scales of signaling from the EGF receptor, supporting models of chemotaxis that integrate short- and long-range signaling...
hVps34 is a nutrient-regulated lipid kinase required for activation of p70 S6 kinaseMaya P Byfield
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Biol Chem 280:33076-82. 2005..Our data suggest that hVps34 is a nutrient-regulated lipid kinase that integrates amino acid and glucose inputs to mTOR and S6K1...
WASP family members and formin proteins coordinate regulation of cell protrusions in carcinoma cellsCorina Sarmiento
Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461, USA
J Cell Biol 180:1245-60. 2008..These data show that coordinate regulation between the WASP family and mDia proteins controls the balance between lamellar and lamellipodial protrusion activity...
Effectively doubling the magnetic field in spin-1/2-spin-1, HSQC, HDQC, coupled HSQC, and coupled HDQC in solution NMRS Chandra Shekar
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Yeshiva University, 1300 Morris Park Avenue, Bronx, NY 10461, USA
J Chem Phys 128:184501. 2008..The coupling doubling, however, is independent of the magnetic field strength and a signature feature of the 2Q coherence. The ramification of the relative relaxation rates of 1Q and 2Q coherences is discussed...
EGF-induced PIP2 hydrolysis releases and activates cofilin locally in carcinoma cellsJacco van Rheenen
Department of Anatomy and Structural Biology, Albert Einstein College of Medicine of Yeshiva University, Bronx, NY 10461, USA
J Cell Biol 179:1247-59. 2007..Moreover, our data provide evidence for how PLC is involved in the formation of protrusions in breast carcinoma cells during chemotaxis and metastasis towards EGF...
Cofilin determines the migration behavior and turning frequency of metastatic cancer cellsMazen Sidani
Department of Anatomy and Structural Biology, Albert Einstein College of Medicine of Yeshiva University, Bronx, NY 10461, USA
J Cell Biol 179:777-91. 2007..The changes in cell shape, directional migration, and turning frequency were related to the re-localization of Arp2/3 complex to one pole of the cell upon suppression of cofilin expression...
Activation of hypothalamic S6 kinase mediates diet-induced hepatic insulin resistance in ratsHiraku Ono
Department of Medicine, Diabetes Research Center, Albert Einstein College of Medicine, New York, New York 10461, USA
J Clin Invest 118:2959-68. 2008..These results suggest that activation of hypothalamic S6K contributes to hepatic insulin resistance in response to short-term nutrient excess...
The regulation of class IA PI 3-kinases by inter-subunit interactionsJonathan M Backer
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, 10461, USA
Curr Top Microbiol Immunol 346:87-114. 2010..The complex web of signaling downstream from Class IA PI 3-kinases will be discussed in other chapters in this volume...
Phospholipase C and cofilin are required for carcinoma cell directionality in response to EGF stimulationGhassan Mouneimne
Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, 1300 Morris Park Ave, Bronx, NY 10461, USA
J Cell Biol 166:697-708. 2004..Therefore, our results demonstrate that the early PLC and cofilin-dependent barbed end transient is required for the initiation of protrusions and is involved in setting the direction of cell movement in response to EGF...
Over-expression of the p110beta but not p110alpha isoform of PI 3-kinase inhibits motility in breast cancer cellsShu Chin Yip
Department of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
Cell Motil Cytoskeleton 59:180-8. 2004..Identification of effectors that are differently regulated by p110alpha versus p110beta will be important for understanding cell migration and its role in metastasis...
Phospholipase C gamma negatively regulates Rac/Cdc42 activation in antigen-stimulated mast cellsMirvat El Sibai
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
Eur J Immunol 37:261-70. 2007..These data suggest that PLCgamma is involved in a negative feedback loop that leads to the inhibition of Rac and Cdc42. They also suggest that the presence of intracellular calcium is a prerequisite for both Rac and Cdc42 activation...
Quantification of PtdIns(3,4,5)P(3) dynamics in EGF-stimulated carcinoma cells: a comparison of PH-domain-mediated methods with immunological methodsShu Chin Yip
Department of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
Biochem J 411:441-8. 2008..These data suggest that anti-PtdIns(3,4,5)P(3) antibodies are a useful tool to detect localized PtdIns(3,4,5)P(3), and illustrate the importance of using multiple approaches for the estimation of membrane phosphoinositides...
Differential enhancement of breast cancer cell motility and metastasis by helical and kinase domain mutations of class IA phosphoinositide 3-kinaseHuan Pang
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
Cancer Res 69:8868-76. 2009..Our observations suggest that, when compared with kinase domain mutations in a genetically identical background, expression of helical domain mutants of p110alpha produce a more severe metastatic phenotype...
Mechanism of constitutive phosphoinositide 3-kinase activation by oncogenic mutants of the p85 regulatory subunitS Chandra Shekar
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Biol Chem 280:27850-5. 2005..Based on these findings, we propose a general model for oncogenic mutants of p85 and p110 in which disruption of nSH2-p110 regulatory contacts leads to constitutive p110 activity...
In brain, Axl recruits Grb2 and the p85 regulatory subunit of PI3 kinase; in vitro mutagenesis defines the requisite binding sites for downstream Akt activationJason G Weinger
Department of Pathology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Neurochem 106:134-46. 2008....
YXXM motifs in the PDGF-beta receptor serve dual roles as phosphoinositide 3-kinase binding motifs and tyrosine-based endocytic sorting signalsHaiyan Wu
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Biol Chem 278:40425-8. 2003..These data suggest that the YXXM motifs in the PDGFR serve two distinct functions: PI 3-kinase recruitment and lysosomal targeting...
The iSH2 domain of PI 3-kinase is a rigid tether for p110 and not a conformational switchZheng Fu
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, USA
Arch Biochem Biophys 432:244-51. 2004..These data support a model in which the iSH2 domain is a rigid tether for p110, and regulation of p85/p110 is mediated by nSH2-p110 contacts...
hVps15, but not Ca2+/CaM, is required for the activity and regulation of hVps34 in mammalian cellsYing Yan
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
Biochem J 417:747-55. 2009..The results of the present study show that, in mammalian cells, hVps34 activity is regulated through its interactions with hVps15, but is independent of Ca2+/CaM...
Regulation of Class IA PI 3-kinases: C2 domain-iSH2 domain contacts inhibit p85/p110alpha and are disrupted in oncogenic p85 mutantsHaiyan Wu
Department of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
Proc Natl Acad Sci U S A 106:20258-63. 2009..Thus, our data suggests that mutations at the C2-iSH2 domain contact and truncations of the iSH2 domain, which are found in human tumors, both act by disrupting the C2-iSH2 domain interface...
The structure of p85ni in class IA phosphoinositide 3-kinase exhibits interdomain disorderK Ilker Sen
Department of Physiology and Biophysics, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA
Biochemistry 49:2159-66. 2010..These data have important implications for the mechanism by which p85/p110 dimers are regulated by phosphopeptides...
The structure of the inter-SH2 domain of class IA phosphoinositide 3-kinase determined by site-directed spin labeling EPR and homology modelingZheng Fu
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
Proc Natl Acad Sci U S A 100:3275-80. 2003..The inter-SH2 domain is assigned as a rigid anti-parallel coiled-coil whose primary function is to bind p110, facilitating inhibition of p110 by the N-terminal SH2 domain of p85...
The late endosome is essential for mTORC1 signalingRory J Flinn
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
Mol Biol Cell 21:833-41. 2010....
Distinct phosphoinositide 3-kinases mediate mast cell degranulation in response to G-protein-coupled versus FcepsilonRI receptorsDavid A Windmiller
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Biol Chem 278:11874-8. 2003..Elucidation of the intersections between these distinct pathways will lead to new insights into mast cell degranulation...
Role of Rab5 in the recruitment of hVps34/p150 to the early endosomeJames T Murray
Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, USA
Traffic 3:416-27. 2002..However, Rab5 does not appear to act by directly recruiting p150/hVps34 complexes from the cytosol to the endosomal membrane...
Fyn phosphorylates human MAP-2c on tyrosine 67S Pilar Zamora-Leon
Department of Pathology, Albert Einstein College of Medicine, Bronx, New York 10461, USA
J Biol Chem 280:1962-70. 2005..Thus, MAP-2c can directly recruit multiple signaling proteins important for central nervous system development...
Substrate specificity: PI(3)Kgamma has it both waysJonathan M Backer
Nat Cell Biol 7:773-4. 2005
Inhibition of autophagy in mitotic animal cellsEeva Liisa Eskelinen
Centre for High Resolution Imaging and Processing, MSI WTB complex, University of Dundee, School of Life Sciences, Dundee DD1 5EH, Scotland
Traffic 3:878-93. 2002..Our results show that autophagy is under strict mitotic control and indicate a novel role for phosphoinositide 3-kinases or other wortmannin/LY294002-sensitive kinases in mitotic membrane traffic regulation...
Phosphoinositide 3-kinase p110beta activity: key role in metabolism and mammary gland cancer but not developmentElisa Ciraolo
Department of Genetics, Biology and Biochemistry, Molecular Biotechnology Center, University of Torino, Via Nizza 52, 10126 Torino, Italy
Sci Signal 1:ra3. 2008..These findings indicate an unexpected role for p110beta catalytic activity in diabetes and cancer, opening potential avenues for therapeutic intervention...
The atypical Rho family GTPase Wrch-1 regulates focal adhesion formation and cell migrationYa yu Chuang
Center for Oncology and Cell Biology, The Feinstein Institute for Medical Research at North Shore LIJ, North Shore University Hospital, Manhasset, NY 11030, USA
J Cell Sci 120:1927-34. 2007..Thus, our data suggest that Wrch-1 regulates cell migration by multiple mechanisms: on the one hand Wrch-1 controls focal adhesions by regulating myosin light chain and on the other hand Wrch-1 stimulates the activation of Akt and JNK...
Amino acids mediate mTOR/raptor signaling through activation of class 3 phosphatidylinositol 3OH-kinaseTakahiro Nobukuni
Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland
Proc Natl Acad Sci U S A 102:14238-43. 2005....
Transforming growth factor beta activates Smad2 in the absence of receptor endocytosisZhongxian Lu
Division of Biomedical Sciences, University of California, Riverside, California 92521, USA
J Biol Chem 277:29363-8. 2002..Thus, our findings suggest that receptor endocytosis is dispersible for TGF-beta-mediated activation of Smad2 and that this activation can be mediated by both SARA-dependent and -independent mechanisms...
Analysis of hVps34/hVps15 interactions with Rab5 in vivo and in vitroJames T Murray
Methods Enzymol 403:789-99. 2005..This chapter describes the analysis of hVps34/hVps15 interactions with Rab5 in tissue culture cells and in vitro...
Mechanism of two classes of cancer mutations in the phosphoinositide 3-kinase catalytic subunitNabil Miled
Medical Research Council Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK
Science 317:239-42. 2007..These studies extend our understanding of the architecture of PI3Ks and provide insight into how two classes of mutations that cause a gain in function can lead to cancer...
The class III PI(3)K Vps34 promotes autophagy and endocytosis but not TOR signaling in DrosophilaGabor Juhasz
Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN 55455, USA
J Cell Biol 181:655-66. 2008..Our results suggest that Vps34 is regulated by TOR-dependent nutrient signals directly at sites of autophagosome formation...
Research Grants
- p85/p110 PI3 Kinase-Structure, function and PhysiologyJonathan M Backer; Fiscal Year: 2010..Understanding the mechanisms that regulate their activity in normal and malignant cells is critical for the design of novel and specific drugs to target these enzymes in human disease. ..
- P85/p110 PI3 Kinase--Structure, Function and PhysiologyJonathan Backer; Fiscal Year: 2009..Completion of these aims will greatly increase our understanding of the p85/p110 PI 3-kinase, and lead to mechanistic insights into its activation in human cancer. ..
- Regulation and Function of hVps34 in Insulin SignalingJonathan Backer; Fiscal Year: 2009..Overall, these studies will have important implications for our understanding of the function and regulation of hVps34, and its role in insulin action and diabetes. ..
- P85/p110 PI3 Kinase--Structure, Function and PhysiologyJonathan Backer; Fiscal Year: 2007..Completion of these aims will greatly increase our understanding of the p85/p110 PI 3-kinase, and lead to mechanistic insights into its activation in human cancer. ..
- Regulation and Function of hVps34 in Insulin SignalingJonathan Backer; Fiscal Year: 2007..Overall, these studies will have important implications for our understanding of the function and regulation of hVps34, and its role in insulin action and diabetes. ..
- P85/p110 PI3 Kinase--Structure, Function and PhysiologyJonathan Backer; Fiscal Year: 2006..Completion of these aims will greatly increase our understanding of the p85/p110 PI 3-kinase, and lead to mechanistic insights into its activation in human cancer. ..
- P85/p110 PI3 Kinase--Structure, Function and PhysiologyJonathan Backer; Fiscal Year: 2004..Successful completion of these experiments will substantially advance our understanding of signal transduction by this critical and physiologically important signaling enzyme. ..
- Regulation and Function of hVps34 in Insulin SignalingJonathan M Backer; Fiscal Year: 2010..Overall, these studies will have important implications for our understanding of the function and regulation of hVps34, and its role in insulin action and diabetes. ..
