Melanie J Filiatrault

Summary

Affiliation: Agricultural Research Service
Country: USA

Publications

  1. ncbi Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000
    Melanie J Filiatrault
    lant Microbe Interactions Research Unit, Robert W Holley Center for Agriculture and Health, Agricultural Research Service, United States Department of Agriculture, Ithaca, New York, USA
    PLoS ONE 6:e29335. 2011
  2. ncbi Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity
    Melanie J Filiatrault
    USDA Agricultural Research Service, Plant Microbe Interactions Research Unit, Cornell University, Plant Science Bldg, Room 334, Ithaca, NY 14853, USA
    J Bacteriol 192:2359-72. 2010
  3. ncbi Progress in prokaryotic transcriptomics
    Melanie J Filiatrault
    Plant Microbe Interactions Research Unit, USDA Agricultural Research Service, Robert W Holley Center for Agriculture and Health, Ithaca, NY 14853, United States
    Curr Opin Microbiol 14:579-86. 2011
  4. ncbi Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000
    Bronwyn G Butcher
    Department of Plant Pathology and Plant Microbe Biology, Cornell University, Ithaca, New York 14853, USA
    J Bacteriol 193:4598-611. 2011
  5. ncbi Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
    Haley F Oliver
    Department of Food Science, Cornell University, Ithaca, NY, USA
    BMC Genomics 10:641. 2009
  6. ncbi Construction of an rsmX co-variance model and identification of five rsmX non-coding RNAs in Pseudomonas syringae pv. tomato DC3000
    Simon Moll
    Department of Plant Pathology and Plant Microbe Biology, Cornell University, Ithaca, NY, USA
    RNA Biol 7:508-16. 2010
  7. ncbi Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro
    Philip A Bronstein
    United States Department of Agriculture Agricultural Research Service, Robert W Holley Center for Agriculture and Health, Ithaca, NY 14853, USA
    BMC Microbiol 8:209. 2008

Collaborators

Detail Information

Publications7

  1. ncbi Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000
    Melanie J Filiatrault
    lant Microbe Interactions Research Unit, Robert W Holley Center for Agriculture and Health, Agricultural Research Service, United States Department of Agriculture, Ithaca, New York, USA
    PLoS ONE 6:e29335. 2011
    ....
  2. ncbi Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity
    Melanie J Filiatrault
    USDA Agricultural Research Service, Plant Microbe Interactions Research Unit, Cornell University, Plant Science Bldg, Room 334, Ithaca, NY 14853, USA
    J Bacteriol 192:2359-72. 2010
    ..Overall, our approach provides an efficient way to survey global transcriptional activity in bacteria and enables rapid discovery of specific areas in the genome that merit further investigation...
  3. ncbi Progress in prokaryotic transcriptomics
    Melanie J Filiatrault
    Plant Microbe Interactions Research Unit, USDA Agricultural Research Service, Robert W Holley Center for Agriculture and Health, Ithaca, NY 14853, United States
    Curr Opin Microbiol 14:579-86. 2011
    ..Advances such as these have led to a new emphasis in areas such as metatranscriptomics and single cell gene expression studies...
  4. ncbi Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000
    Bronwyn G Butcher
    Department of Plant Pathology and Plant Microbe Biology, Cornell University, Ithaca, New York 14853, USA
    J Bacteriol 193:4598-611. 2011
    ....
  5. ncbi Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
    Haley F Oliver
    Department of Food Science, Cornell University, Ithaca, NY, USA
    BMC Genomics 10:641. 2009
    ....
  6. ncbi Construction of an rsmX co-variance model and identification of five rsmX non-coding RNAs in Pseudomonas syringae pv. tomato DC3000
    Simon Moll
    Department of Plant Pathology and Plant Microbe Biology, Cornell University, Ithaca, NY, USA
    RNA Biol 7:508-16. 2010
    ..We also found that these rsmX ncRNA genes share a conserved upstream region suggesting that their expression is dependent upon the global response regulator, GacA...
  7. ncbi Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro
    Philip A Bronstein
    United States Department of Agriculture Agricultural Research Service, Robert W Holley Center for Agriculture and Health, Ithaca, NY 14853, USA
    BMC Microbiol 8:209. 2008
    ..In this study we used microarrays to study differential gene regulation in DC3000 in response to changes in levels of cell-associated iron...