Research Topics

Cheng Ju Kuo

Affiliation: Academia Sinica

Country: Taiwan

BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature
Cheng Ju Kuo
Institute of Information Science, Academia Sinica, Taipei 115, Taiwan, Republic of China
BMC Bioinformatics 10:S7. 2009
Integrating high dimensional bi-directional parsing models for gene mention tagging
Chun Nan Hsu
Institute of Information Science, Academia Sinica, Taipei, Taiwan
Bioinformatics 24:i286-94. 2008
Soft tagging of overlapping high confidence gene mention variants for cross-species full-text gene normalization
Cheng Ju Kuo
Institute of Information Science, Academia Sinica, Taipei 115, Taiwan
BMC Bioinformatics 12:S6. 2011

BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature
Cheng Ju Kuo
Institute of Information Science, Academia Sinica, Taipei 115, Taiwan, Republic of China
BMC Bioinformatics 10:S7. 2009
....
Integrating high dimensional bi-directional parsing models for gene mention tagging
Chun Nan Hsu
Institute of Information Science, Academia Sinica, Taipei, Taiwan
Bioinformatics 24:i286-94. 2008
..Our tagger is interesting because it accomplished the highest F-scores among CRF-based methods and second over all. Moreover, we obtained our results by mostly applying open source packages, making it easy to duplicate our results...
Soft tagging of overlapping high confidence gene mention variants for cross-species full-text gene normalization
Cheng Ju Kuo
Institute of Information Science, Academia Sinica, Taipei 115, Taiwan
BMC Bioinformatics 12:S6. 2011
..Required to process full-length articles, an ineffective gene mention tagger may produce a huge number of ambiguous false positives that overwhelm subsequent filtering steps while still missing many true positives...